RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 TRBV30A0A0K0K1B3 111 aa1.25□□□□□ -2.21
CLK1-204ENST00000432425 IGKV2D-40P01614 121 aaPredicted RBP1.25□□□□□ -2.21
CLK1-204ENST00000432425 C4orf3Q8WVX3 66 aa1.25□□□□□ -2.21
CLK1-204ENST00000432425 SPRR4Q96PI1 79 aa1.25□□□□□ -2.21
CLK1-204ENST00000432425 WFDC6Q9BQY6 131 aa1.25□□□□□ -2.21
CLK1-204ENST00000432425 DEPDC5O75140 1603 aa1.24□□□□□ -2.21
CLK1-204ENST00000432425 TRAV1-2A0A0B4J238 106 aa1.24□□□□□ -2.21
CLK1-204ENST00000432425 H0Y9P7 68 aa1.24□□□□□ -2.21
CLK1-204ENST00000432425 UQCR11O14957 56 aa1.24□□□□□ -2.21
CLK1-204ENST00000432425 MGPP08493 103 aa1.24□□□□□ -2.21
CLK1-204ENST00000432425 C10orf55Q5SWW7 151 aa1.24□□□□□ -2.21
CLK1-204ENST00000432425 ENHOQ6UWT2 76 aa1.24□□□□□ -2.21
CLK1-204ENST00000432425 C5orf56Q8N8D9 126 aa1.24□□□□□ -2.21
CLK1-204ENST00000432425 WFDC9Q8NEX5 89 aa1.24□□□□□ -2.21
CLK1-204ENST00000432425 TMEM263Q8WUH6 116 aaKnown RBP1.24□□□□□ -2.21
CLK1-204ENST00000432425 LINC00208Q96KT6 92 aa1.24□□□□□ -2.21
CLK1-204ENST00000432425 Q96NJ1 140 aa1.24□□□□□ -2.21
CLK1-204ENST00000432425 LINC00846Q9NV44 126 aa1.24□□□□□ -2.21
CLK1-204ENST00000432425 BAHCC1Q9P281 2608 aa1.24□□□□□ -2.21
CLK1-204ENST00000432425 DDX60Q8IY21 1712 aaKnown RBP1.24□□□□□ -2.21
CLK1-204ENST00000432425 TRGV1A0A0A0MS02 117 aa1.23□□□□□ -2.21
CLK1-204ENST00000432425 CAV3P56539 151 aa1.23□□□□□ -2.21
CLK1-204ENST00000432425 C10orf113Q5VZT2 155 aa1.23□□□□□ -2.21
CLK1-204ENST00000432425 DEFB132Q7Z7B7 95 aa1.23□□□□□ -2.21
CLK1-204ENST00000432425 LINC00472Q9H8W2 130 aa1.23□□□□□ -2.21
CLK1-204ENST00000432425 TNCP24821 2201 aa1.23□□□□□ -2.21
CLK1-204ENST00000432425 TRGV2A0A075B6R0 118 aa1.23□□□□□ -2.21
CLK1-204ENST00000432425 FXYD4P59646 89 aa1.23□□□□□ -2.21
CLK1-204ENST00000432425 LINC00322Q6ZN03 302 aaPredicted RBP1.23□□□□□ -2.21
CLK1-204ENST00000432425 SPATA8Q6RVD6 105 aa1.22□□□□□ -2.21
CLK1-204ENST00000432425 ABRACLQ9P1F3 81 aa1.22□□□□□ -2.21
CLK1-204ENST00000432425 H3BRN7 92 aa1.21□□□□□ -2.22
CLK1-204ENST00000432425 DEFB112Q30KQ8 113 aa1.21□□□□□ -2.22
CLK1-204ENST00000432425 ZNF625Q96I27 306 aaPredicted RBP1.21□□□□□ -2.22
CLK1-204ENST00000432425 C4AP0C0L4 1744 aa1.21□□□□□ -2.22
CLK1-204ENST00000432425 C4BP0C0L5 1744 aa1.21□□□□□ -2.22
CLK1-204ENST00000432425 GOLGA4Q13439 2230 aaKnown RBP1.21□□□□□ -2.22
CLK1-204ENST00000432425 PLXNB2O15031 1838 aa1.21□□□□□ -2.22
CLK1-204ENST00000432425 TRBV6-1A0A0K0K1D8 114 aa1.2□□□□□ -2.22
CLK1-204ENST00000432425 LCE6AA0A183 80 aa1.2□□□□□ -2.22
CLK1-204ENST00000432425 LINC00959A0A1B0GUT2 108 aa1.2□□□□□ -2.22
CLK1-204ENST00000432425 NDUFB1O75438 58 aa1.2□□□□□ -2.22
CLK1-204ENST00000432425 GAFA1Q96PS6 74 aa1.2□□□□□ -2.22
CLK1-204ENST00000432425 TMEM14CQ9P0S9 112 aa1.2□□□□□ -2.22
CLK1-204ENST00000432425 LOC110117498A0A087WWA1 95 aa1.2□□□□□ -2.22
CLK1-204ENST00000432425 ACYP2P14621 99 aa1.2□□□□□ -2.22
CLK1-204ENST00000432425 UBL5Q9BZL1 73 aa1.2□□□□□ -2.22
CLK1-204ENST00000432425 TIMM8BQ9Y5J9 83 aaPredicted RBP1.2□□□□□ -2.22
CLK1-204ENST00000432425 TECTAO75443 2155 aa1.19□□□□□ -2.22
CLK1-204ENST00000432425 SAMD9LQ8IVG5 1584 aa1.19□□□□□ -2.22
CLK1-204ENST00000432425 SMIM27A0A1W2PRY6 76 aa1.19□□□□□ -2.22
CLK1-204ENST00000432425 M0R1W7 72 aa1.19□□□□□ -2.22
CLK1-204ENST00000432425 SPINK4O60575 86 aa1.19□□□□□ -2.22
CLK1-204ENST00000432425 OBSCN-AS1Q96MR7 158 aa1.19□□□□□ -2.22
CLK1-204ENST00000432425 URB1O60287 2271 aaKnown RBP1.19□□□□□ -2.22
CLK1-204ENST00000432425 TULP4Q9NRJ4 1543 aa1.18□□□□□ -2.22
CLK1-204ENST00000432425 A0A1B0GU69 56 aa1.18□□□□□ -2.22
CLK1-204ENST00000432425 NDUFA4O00483 81 aa1.18□□□□□ -2.22
CLK1-204ENST00000432425 INE1O15225 51 aa1.18□□□□□ -2.22
CLK1-204ENST00000432425 ARL14EPLP0DKL9 152 aa1.18□□□□□ -2.22
CLK1-204ENST00000432425 COX17Q14061 63 aa1.18□□□□□ -2.22
CLK1-204ENST00000432425 Q6ZRN7 208 aaPredicted RBP1.18□□□□□ -2.22
CLK1-204ENST00000432425 COA5Q86WW8 74 aa1.18□□□□□ -2.22
CLK1-204ENST00000432425 CACNA1GO43497 2377 aa1.18□□□□□ -2.22
CLK1-204ENST00000432425 ASXL3Q9C0F0 2248 aa1.17□□□□□ -2.22
CLK1-204ENST00000432425 ICE1Q9Y2F5 2266 aa1.17□□□□□ -2.22
CLK1-204ENST00000432425 CCL19Q99731 98 aa1.17□□□□□ -2.22
CLK1-204ENST00000432425 ATP7AQ04656 1500 aa1.17□□□□□ -2.22
CLK1-204ENST00000432425 LRRC37A2A6NM11 1700 aa1.17□□□□□ -2.22
CLK1-204ENST00000432425 I3L3M4 83 aa1.16□□□□□ -2.22
CLK1-204ENST00000432425 PRB1P04280 392 aa1.16□□□□□ -2.22
CLK1-204ENST00000432425 COX6B1P14854 86 aa1.16□□□□□ -2.22
CLK1-204ENST00000432425 KNTC1P50748 2209 aa1.16□□□□□ -2.22
CLK1-204ENST00000432425 TXNDC17Q9BRA2 123 aa1.16□□□□□ -2.22
CLK1-204ENST00000432425 KMT2BQ9UMN6 2715 aaPredicted RBP1.16□□□□□ -2.22
CLK1-204ENST00000432425 SSC5DA1L4H1 1573 aa1.16□□□□□ -2.22
CLK1-204ENST00000432425 IGIPA6NJ69 53 aa1.16□□□□□ -2.22
CLK1-204ENST00000432425 G3V318 75 aa1.16□□□□□ -2.22
CLK1-204ENST00000432425 COX7BP24311 80 aa1.16□□□□□ -2.22
CLK1-204ENST00000432425 PLNP26678 52 aa1.16□□□□□ -2.22
CLK1-204ENST00000432425 HAMPP81172 84 aa1.16□□□□□ -2.22
CLK1-204ENST00000432425 Q6ZQY7 126 aa1.16□□□□□ -2.22
CLK1-204ENST00000432425 ASCC3Q8N3C0 2202 aaKnown RBP1.16□□□□□ -2.22
CLK1-204ENST00000432425 AHNAK2Q8IVF2 5795 aa1.15□□□□□ -2.22
CLK1-204ENST00000432425 ANKRD17O75179 2603 aaKnown RBP1.15□□□□□ -2.23
CLK1-204ENST00000432425 M0R2N4 97 aa1.15□□□□□ -2.23
CLK1-204ENST00000432425 SERF2P84101 59 aa1.15□□□□□ -2.23
CLK1-204ENST00000432425 TENM1Q9UKZ4 2725 aa1.15□□□□□ -2.23
CLK1-204ENST00000432425 AHNAKQ09666 5890 aaKnown RBP1.14□□□□□ -2.23
CLK1-204ENST00000432425 BPTFQ12830 3046 aa1.14□□□□□ -2.23
CLK1-204ENST00000432425 SNRPGP62308 76 aaKnown RBP1.14□□□□□ -2.23
CLK1-204ENST00000432425 SSBP3-AS1Q7Z2R9 100 aa1.14□□□□□ -2.23
CLK1-204ENST00000432425 A0A0G2JMZ2 1700 aa1.14□□□□□ -2.23
CLK1-204ENST00000432425 LMO7Q8WWI1 1683 aa1.14□□□□□ -2.23
CLK1-204ENST00000432425 A0A096LNT2 108 aa1.13□□□□□ -2.23
CLK1-204ENST00000432425 Q6ZRX8 168 aa1.13□□□□□ -2.23
CLK1-204ENST00000432425 DUOX1Q9NRD9 1551 aa1.13□□□□□ -2.23
CLK1-204ENST00000432425 NDUFA3O95167 84 aa1.13□□□□□ -2.23
CLK1-204ENST00000432425 LY6G6CO95867 125 aa1.13□□□□□ -2.23
CLK1-204ENST00000432425 FXYD6P3P58550 94 aa1.13□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms