RNA–Protein interactions for RNA: ENST00000430617.6

ATG4B-212, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 623 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-212ENST00000430617 LCE2AQ5TA79 106 aaPredicted RBP6.42□□□□□ -1.38
ATG4B-212ENST00000430617 LINC00526Q96FQ7 95 aa6.42□□□□□ -1.38
ATG4B-212ENST00000430617 C2orf48Q96LS8 159 aa6.42□□□□□ -1.38
ATG4B-212ENST00000430617 F8WDY8 70 aa6.41□□□□□ -1.38
ATG4B-212ENST00000430617 C6orf226Q5I0X4 101 aa6.41□□□□□ -1.38
ATG4B-212ENST00000430617 C10orf25Q5T742 122 aa6.41□□□□□ -1.38
ATG4B-212ENST00000430617 SCGB1D4Q6XE38 83 aa6.41□□□□□ -1.38
ATG4B-212ENST00000430617 SPANXB1Q9NS25 103 aaPredicted RBP6.41□□□□□ -1.38
ATG4B-212ENST00000430617 ZNF561-AS1K7EIQ3 104 aa6.4□□□□□ -1.38
ATG4B-212ENST00000430617 M0R143 59 aa6.4□□□□□ -1.38
ATG4B-212ENST00000430617 CKS1BP61024 79 aa6.4□□□□□ -1.38
ATG4B-212ENST00000430617 CTAG1AP78358 180 aa6.4□□□□□ -1.38
ATG4B-212ENST00000430617 LBHQ53QV2 105 aaPredicted RBP6.4□□□□□ -1.38
ATG4B-212ENST00000430617 UNQ6190/PRO20217Q6UXQ8 127 aa6.4□□□□□ -1.38
ATG4B-212ENST00000430617 C6orf48Q9UBA6 75 aa6.4□□□□□ -1.38
ATG4B-212ENST00000430617 TMEM238C9JI98 176 aa6.39□□□□□ -1.39
ATG4B-212ENST00000430617 SLPIP03973 132 aa6.39□□□□□ -1.39
ATG4B-212ENST00000430617 HSD52Q0P140 79 aa6.39□□□□□ -1.39
ATG4B-212ENST00000430617 CAMK2N2Q96S95 79 aa6.39□□□□□ -1.39
ATG4B-212ENST00000430617 SPANXDQ9BXN6 97 aa6.39□□□□□ -1.39
ATG4B-212ENST00000430617 SNHG12Q9BXW3 62 aa6.39□□□□□ -1.39
ATG4B-212ENST00000430617 SPANXCQ9NY87 97 aa6.39□□□□□ -1.39
ATG4B-212ENST00000430617 ERG28Q9UKR5 140 aa6.39□□□□□ -1.39
ATG4B-212ENST00000430617 TRBV30A0A0K0K1B3 111 aa6.38□□□□□ -1.39
ATG4B-212ENST00000430617 SMIM13P0DJ93 91 aa6.38□□□□□ -1.39
ATG4B-212ENST00000430617 TAL2Q16559 108 aa6.38□□□□□ -1.39
ATG4B-212ENST00000430617 MEIG1Q5JSS6 88 aa6.38□□□□□ -1.39
ATG4B-212ENST00000430617 ADAMTSL4-AS1Q5T5F5 129 aa6.38□□□□□ -1.39
ATG4B-212ENST00000430617 FSIP2Q5CZC0 6907 aa6.38□□□□□ -1.39
ATG4B-212ENST00000430617 CNBPP62633 177 aaKnown RBP6.37□□□□□ -1.39
ATG4B-212ENST00000430617 SYCNQ0VAF6 134 aa6.37□□□□□ -1.39
ATG4B-212ENST00000430617 C14orf177Q52M58 125 aa6.37□□□□□ -1.39
ATG4B-212ENST00000430617 C9orf116Q5BN46 136 aaPredicted RBP6.37□□□□□ -1.39
ATG4B-212ENST00000430617 CARD19Q96LW7 228 aa6.37□□□□□ -1.39
ATG4B-212ENST00000430617 COX17Q14061 63 aa6.36□□□□□ -1.39
ATG4B-212ENST00000430617 RNF151Q2KHN1 245 aa6.36□□□□□ -1.39
ATG4B-212ENST00000430617 DAND5Q8N907 189 aa6.36□□□□□ -1.39
ATG4B-212ENST00000430617 LINC01600Q96MT4 127 aa6.36□□□□□ -1.39
ATG4B-212ENST00000430617 PPDPFQ9H3Y8 114 aa6.36□□□□□ -1.39
ATG4B-212ENST00000430617 A0A0U1RRA0 63 aa6.35□□□□□ -1.39
ATG4B-212ENST00000430617 EIF4EBP3O60516 100 aaPredicted RBP6.35□□□□□ -1.39
ATG4B-212ENST00000430617 PTTG1IPP53801 180 aa6.35□□□□□ -1.39
ATG4B-212ENST00000430617 SOSTDC1Q6X4U4 206 aa6.35□□□□□ -1.39
ATG4B-212ENST00000430617 Q6ZVH6 145 aa6.35□□□□□ -1.39
ATG4B-212ENST00000430617 MIR7-3HGQ8N6C7 128 aa6.35□□□□□ -1.39
ATG4B-212ENST00000430617 TLX1NBP0CAT3 122 aa6.34□□□□□ -1.39
ATG4B-212ENST00000430617 PFN2P35080 140 aa6.34□□□□□ -1.39
ATG4B-212ENST00000430617 FXYD2P54710 66 aa6.34□□□□□ -1.39
ATG4B-212ENST00000430617 CIRBPQ14011 172 aaKnown RBP6.34□□□□□ -1.39
ATG4B-212ENST00000430617 BVES-AS1Q5T3Y7 98 aa6.34□□□□□ -1.39
ATG4B-212ENST00000430617 CEND1Q8N111 149 aa6.34□□□□□ -1.39
ATG4B-212ENST00000430617 LINC00308Q8TCZ7 52 aa6.34□□□□□ -1.39
ATG4B-212ENST00000430617 HIST1H4GQ99525 98 aa6.34□□□□□ -1.39
ATG4B-212ENST00000430617 NDUFC2-KCTD14E9PQ53 114 aa6.33□□□□□ -1.4
ATG4B-212ENST00000430617 IFITM1P13164 125 aa6.33□□□□□ -1.4
ATG4B-212ENST00000430617 LINC00158P58513 81 aa6.33□□□□□ -1.4
ATG4B-212ENST00000430617 SRSF9Q13242 221 aaKnown RBP eCLIP6.33□□□□□ -1.4
ATG4B-212ENST00000430617 LOC107984156A0A0G2JMH3 177 aa6.32□□□□□ -1.4
ATG4B-212ENST00000430617 PANO1I0J062 215 aa6.32□□□□□ -1.4
ATG4B-212ENST00000430617 HINT1P49773 126 aaPredicted RBP6.32□□□□□ -1.4
ATG4B-212ENST00000430617 KRTAP10-8P60410 259 aa6.32□□□□□ -1.4
ATG4B-212ENST00000430617 NPC2P61916 151 aa6.32□□□□□ -1.4
ATG4B-212ENST00000430617 BATFQ16520 125 aa6.32□□□□□ -1.4
ATG4B-212ENST00000430617 COL5A1-AS1Q5SY13 56 aa6.32□□□□□ -1.4
ATG4B-212ENST00000430617 Q6ZRP5 223 aa6.32□□□□□ -1.4
ATG4B-212ENST00000430617 MUSTN1Q8IVN3 82 aa6.32□□□□□ -1.4
ATG4B-212ENST00000430617 ARL17AQ8IVW1 177 aa6.32□□□□□ -1.4
ATG4B-212ENST00000430617 SND1-IT1Q9HBX3 110 aa6.32□□□□□ -1.4
ATG4B-212ENST00000430617 CRCT1Q9UGL9 99 aa6.32□□□□□ -1.4
ATG4B-212ENST00000430617 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.31□□□□□ -1.4
ATG4B-212ENST00000430617 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.3□□□□□ -1.4
ATG4B-212ENST00000430617 A0A0U1RQV1 116 aa6.3□□□□□ -1.4
ATG4B-212ENST00000430617 A0A1B0GWB2 263 aa6.3□□□□□ -1.4
ATG4B-212ENST00000430617 A4D1N5 150 aa6.3□□□□□ -1.4
ATG4B-212ENST00000430617 C9orf163Q8N9P6 203 aa6.3□□□□□ -1.4
ATG4B-212ENST00000430617 Q8NDZ9 215 aa6.3□□□□□ -1.4
ATG4B-212ENST00000430617 LOC107984640A0A0U1RRK4 108 aa6.29□□□□□ -1.4
ATG4B-212ENST00000430617 RPL24P83731 157 aaKnown RBP6.29□□□□□ -1.4
ATG4B-212ENST00000430617 C9orf129Q5T035 196 aaKnown RBP6.29□□□□□ -1.4
ATG4B-212ENST00000430617 COPS9Q8WXC6 57 aa6.29□□□□□ -1.4
ATG4B-212ENST00000430617 TMEM238LA0A1B0GVL6 79 aa6.28□□□□□ -1.4
ATG4B-212ENST00000430617 A6NJY4 79 aa6.28□□□□□ -1.4
ATG4B-212ENST00000430617 RPL18AQ02543 176 aaKnown RBP6.28□□□□□ -1.4
ATG4B-212ENST00000430617 XAGE1AQ9HD64 81 aa6.28□□□□□ -1.4
ATG4B-212ENST00000430617 IGKV2-28A0A075B6P5 120 aa6.27□□□□□ -1.41
ATG4B-212ENST00000430617 A0A096LNI7 61 aa6.27□□□□□ -1.41
ATG4B-212ENST00000430617 A0A0B4J2C4 111 aa6.27□□□□□ -1.41
ATG4B-212ENST00000430617 K7ERJ3 54 aa6.27□□□□□ -1.41
ATG4B-212ENST00000430617 NDUFC2O95298 119 aa6.27□□□□□ -1.41
ATG4B-212ENST00000430617 IGKV2D-28P01615 120 aa6.27□□□□□ -1.41
ATG4B-212ENST00000430617 NHP2Q9NX24 153 aaKnown RBP6.27□□□□□ -1.41
ATG4B-212ENST00000430617 A0A1B0GV90 55 aa6.26□□□□□ -1.41
ATG4B-212ENST00000430617 A6NDN8 102 aa6.26□□□□□ -1.41
ATG4B-212ENST00000430617 CFC1BP0CG36 223 aa6.26□□□□□ -1.41
ATG4B-212ENST00000430617 CFC1P0CG37 223 aa6.26□□□□□ -1.41
ATG4B-212ENST00000430617 VPREB1P12018 145 aa6.26□□□□□ -1.41
ATG4B-212ENST00000430617 GAGE2EQ4V326 116 aa6.26□□□□□ -1.41
ATG4B-212ENST00000430617 GAGE2DQ9UEU5 116 aa6.26□□□□□ -1.41
ATG4B-212ENST00000430617 PKIGQ9Y2B9 76 aa6.26□□□□□ -1.41
ATG4B-212ENST00000430617 SDIM1Q6ZPB5 146 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms