RNA–Protein interactions for RNA: ENST00000428848.7

CDH13-202, Transcript of cadherin 13, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CDH13, Length 2,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-202ENST00000428848 TRAV7A0A075B6U4 112 aa6.1□□□□□ -1.43
CDH13-202ENST00000428848 TRAV23DV6A0A075B6W5 121 aa6.1□□□□□ -1.43
CDH13-202ENST00000428848 CD164Q04900 197 aa6.1□□□□□ -1.43
CDH13-202ENST00000428848 KLKP1Q107X0 134 aa6.1□□□□□ -1.43
CDH13-202ENST00000428848 SS18Q15532 418 aa6.1□□□□□ -1.43
CDH13-202ENST00000428848 BRK1Q8WUW1 75 aa6.1□□□□□ -1.43
CDH13-202ENST00000428848 HIVEP2P31629 2446 aa6.09□□□□□ -1.43
CDH13-202ENST00000428848 A0A1B0GUV1 79 aa6.09□□□□□ -1.43
CDH13-202ENST00000428848 PMAIP1Q13794 54 aa6.09□□□□□ -1.43
CDH13-202ENST00000428848 PAX4O43316 350 aa6.08□□□□□ -1.44
CDH13-202ENST00000428848 C9orf66Q5T8R8 295 aa6.08□□□□□ -1.44
CDH13-202ENST00000428848 Q8IZM0 81 aa6.08□□□□□ -1.44
CDH13-202ENST00000428848 UBL5Q9BZL1 73 aa6.08□□□□□ -1.44
CDH13-202ENST00000428848 NANOS2P60321 138 aaKnown RBP6.08□□□□□ -1.44
CDH13-202ENST00000428848 LINC00482Q8N8I6 264 aa6.08□□□□□ -1.44
CDH13-202ENST00000428848 ANK3Q12955 4377 aaKnown RBP6.07□□□□□ -1.44
CDH13-202ENST00000428848 INAFM1C9JVW0 142 aa6.07□□□□□ -1.44
CDH13-202ENST00000428848 ATP5EP56381 51 aaPredicted RBP6.07□□□□□ -1.44
CDH13-202ENST00000428848 ENHOQ6UWT2 76 aa6.07□□□□□ -1.44
CDH13-202ENST00000428848 A0A0U1RQV1 116 aa6.07□□□□□ -1.44
CDH13-202ENST00000428848 OXLD1Q5BKU9 147 aa6.07□□□□□ -1.44
CDH13-202ENST00000428848 TMEM256-PLSCR3K7ERE1 68 aa6.06□□□□□ -1.44
CDH13-202ENST00000428848 SLPIP03973 132 aa6.06□□□□□ -1.44
CDH13-202ENST00000428848 NDUFC1O43677 76 aa6.06□□□□□ -1.44
CDH13-202ENST00000428848 KIAA0087Q14695 138 aa6.06□□□□□ -1.44
CDH13-202ENST00000428848 FP248Q71RG6 208 aaPredicted RBP6.06□□□□□ -1.44
CDH13-202ENST00000428848 MDFIQ99750 246 aa6.06□□□□□ -1.44
CDH13-202ENST00000428848 GYPEP15421 78 aa6.05□□□□□ -1.44
CDH13-202ENST00000428848 WFDC9Q8NEX5 89 aa6.05□□□□□ -1.44
CDH13-202ENST00000428848 CUBNO60494 3623 aa6.05□□□□□ -1.44
CDH13-202ENST00000428848 APOC4P55056 127 aa6.04□□□□□ -1.44
CDH13-202ENST00000428848 Q8N814 137 aa6.04□□□□□ -1.44
CDH13-202ENST00000428848 C11orf68Q9H3H3 251 aaKnown RBP6.04□□□□□ -1.44
CDH13-202ENST00000428848 ATRQ13535 2644 aa6.04□□□□□ -1.44
CDH13-202ENST00000428848 IGHV4-28A0A0C4DH34 117 aa6.04□□□□□ -1.44
CDH13-202ENST00000428848 COX17Q14061 63 aa6.04□□□□□ -1.44
CDH13-202ENST00000428848 RETNQ9HD89 108 aa6.04□□□□□ -1.44
CDH13-202ENST00000428848 COL6A5A8TX70 2615 aa6.03□□□□□ -1.44
CDH13-202ENST00000428848 DNHD1Q96M86 4753 aa6.03□□□□□ -1.44
CDH13-202ENST00000428848 DEFB130BP0DP73 79 aa6.03□□□□□ -1.44
CDH13-202ENST00000428848 DEFB130AP0DP74 79 aa6.03□□□□□ -1.44
CDH13-202ENST00000428848 Q6ZRU5 148 aa6.03□□□□□ -1.44
CDH13-202ENST00000428848 PRR15Q8IV56 129 aa6.03□□□□□ -1.44
CDH13-202ENST00000428848 X6R8D5 127 aa6.03□□□□□ -1.44
CDH13-202ENST00000428848 FBN1P35555 2871 aaKnown RBP6.03□□□□□ -1.44
CDH13-202ENST00000428848 PRO0255Q9UI72 69 aa6.03□□□□□ -1.44
CDH13-202ENST00000428848 LYRM9A8MSI8 78 aa6.02□□□□□ -1.45
CDH13-202ENST00000428848 KRTAP10-3P60369 221 aa6.02□□□□□ -1.45
CDH13-202ENST00000428848 PRR3P79522 188 aaKnown RBP6.02□□□□□ -1.45
CDH13-202ENST00000428848 CD164L2Q6UWJ8 174 aa6.02□□□□□ -1.45
CDH13-202ENST00000428848 LOC110117498A0A087WWA1 95 aa6.01□□□□□ -1.45
CDH13-202ENST00000428848 TRBV7-6A0A0J9YX20 115 aa6.01□□□□□ -1.45
CDH13-202ENST00000428848 F8WEM9 126 aa6.01□□□□□ -1.45
CDH13-202ENST00000428848 CLPSL2Q6UWE3 100 aa6.01□□□□□ -1.45
CDH13-202ENST00000428848 Q8NDZ9 215 aa6.01□□□□□ -1.45
CDH13-202ENST00000428848 LINC01547P58512 204 aaPredicted RBP6□□□□□ -1.45
CDH13-202ENST00000428848 CXCL6P80162 114 aa6□□□□□ -1.45
CDH13-202ENST00000428848 Q6ZQT0 140 aa6□□□□□ -1.45
CDH13-202ENST00000428848 LINC00269Q8N2A0 174 aa6□□□□□ -1.45
CDH13-202ENST00000428848 CHCHD10Q8WYQ3 142 aaPredicted RBP6□□□□□ -1.45
CDH13-202ENST00000428848 RMI2Q96E14 147 aa6□□□□□ -1.45
CDH13-202ENST00000428848 RBM3P98179 157 aaKnown RBP5.99□□□□□ -1.45
CDH13-202ENST00000428848 A0A096LPF7 62 aa5.99□□□□□ -1.45
CDH13-202ENST00000428848 LINC00575Q6W349 94 aa5.99□□□□□ -1.45
CDH13-202ENST00000428848 STAB1Q9NY15 2570 aa5.99□□□□□ -1.45
CDH13-202ENST00000428848 MIFP14174 115 aa5.98□□□□□ -1.45
CDH13-202ENST00000428848 REG3AQ06141 175 aa5.98□□□□□ -1.45
CDH13-202ENST00000428848 C6orf99Q4VX62 202 aa5.98□□□□□ -1.45
CDH13-202ENST00000428848 C9orf116Q5BN46 136 aaPredicted RBP5.98□□□□□ -1.45
CDH13-202ENST00000428848 MUC7Q8TAX7 377 aa5.98□□□□□ -1.45
CDH13-202ENST00000428848 SNURFQ9Y675 71 aa5.98□□□□□ -1.45
CDH13-202ENST00000428848 TRBV7-4A0A0J9YYF1 115 aa5.97□□□□□ -1.45
CDH13-202ENST00000428848 PDE6GP18545 87 aa5.97□□□□□ -1.45
CDH13-202ENST00000428848 C4orf48Q5BLP8 95 aa5.97□□□□□ -1.45
CDH13-202ENST00000428848 Q8N3U1 123 aa5.97□□□□□ -1.45
CDH13-202ENST00000428848 TRAV10A0A0B4J240 114 aa5.97□□□□□ -1.45
CDH13-202ENST00000428848 ERC2-IT1O76042 136 aa5.97□□□□□ -1.45
CDH13-202ENST00000428848 Q6ZVQ6 151 aa5.97□□□□□ -1.45
CDH13-202ENST00000428848 C6orf223Q8N319 242 aa5.97□□□□□ -1.45
CDH13-202ENST00000428848 SPATA3Q8NHX4 192 aa5.97□□□□□ -1.45
CDH13-202ENST00000428848 H3BQ85 93 aa5.96□□□□□ -1.46
CDH13-202ENST00000428848 MRPL55Q7Z7F7 128 aaKnown RBP5.96□□□□□ -1.46
CDH13-202ENST00000428848 IGLV10-54A0A075B6I4 117 aa5.96□□□□□ -1.46
CDH13-202ENST00000428848 A0A0J9YWU9 116 aa5.96□□□□□ -1.46
CDH13-202ENST00000428848 ANGP03950 147 aaKnown RBP5.96□□□□□ -1.46
CDH13-202ENST00000428848 IGHV4-30-4P0DP06 118 aa5.96□□□□□ -1.46
CDH13-202ENST00000428848 DAD1P61803 113 aa5.96□□□□□ -1.46
CDH13-202ENST00000428848 LINC00474Q9P2X8 69 aa5.96□□□□□ -1.46
CDH13-202ENST00000428848 FBN3Q75N90 2809 aa5.96□□□□□ -1.46
CDH13-202ENST00000428848 IGLV6-57P01721 117 aa5.95□□□□□ -1.46
CDH13-202ENST00000428848 C10orf25Q5T742 122 aa5.95□□□□□ -1.46
CDH13-202ENST00000428848 SPART-AS1P0CW21 52 aa5.94□□□□□ -1.46
CDH13-202ENST00000428848 HAMPP81172 84 aa5.94□□□□□ -1.46
CDH13-202ENST00000428848 DEFB135Q30KP9 77 aa5.94□□□□□ -1.46
CDH13-202ENST00000428848 UNQ6190/PRO20217Q6UXQ8 127 aa5.94□□□□□ -1.46
CDH13-202ENST00000428848 PRR34Q9NV39 138 aa5.93□□□□□ -1.46
CDH13-202ENST00000428848 GVQW2A0A096LPI5 108 aaPredicted RBP5.93□□□□□ -1.46
CDH13-202ENST00000428848 SPAG11BQ08648 103 aa5.93□□□□□ -1.46
CDH13-202ENST00000428848 M0R2N4 97 aa5.92□□□□□ -1.46
CDH13-202ENST00000428848 NREPQ16612 68 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms