RNA–Protein interactions for RNA: ENST00000428776.1

HMGB3P4-201, Transcript of high mobility group box 3 pseudogene 4, humanhuman

BASIC

Gene HMGB3P4, Length 514 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P4-201ENST00000428776 GAGE2DQ9UEU5 116 aa8.22□□□□□ -1.09
HMGB3P4-201ENST00000428776 RTL8CO15255 209 aa8.21□□□□□ -1.1
HMGB3P4-201ENST00000428776 DNAH6Q9C0G6 4158 aa8.21□□□□□ -1.1
HMGB3P4-201ENST00000428776 DNAH10Q8IVF4 4471 aa8.21□□□□□ -1.1
HMGB3P4-201ENST00000428776 IGKV2-28A0A075B6P5 120 aa8.19□□□□□ -1.1
HMGB3P4-201ENST00000428776 TRAV13-2A0A0B4J235 113 aa8.19□□□□□ -1.1
HMGB3P4-201ENST00000428776 IGKV2D-28P01615 120 aa8.19□□□□□ -1.1
HMGB3P4-201ENST00000428776 TNP2Q05952 138 aa8.19□□□□□ -1.1
HMGB3P4-201ENST00000428776 C9orf129Q5T035 196 aaKnown RBP8.19□□□□□ -1.1
HMGB3P4-201ENST00000428776 C9orf118A6NHY6 69 aa8.18□□□□□ -1.1
HMGB3P4-201ENST00000428776 GAGE2BQ13066 116 aa8.18□□□□□ -1.1
HMGB3P4-201ENST00000428776 PGPEP1Q9NXJ5 209 aa8.18□□□□□ -1.1
HMGB3P4-201ENST00000428776 PLA2G2DQ9UNK4 145 aa8.18□□□□□ -1.1
HMGB3P4-201ENST00000428776 TRBV10-2A0A0K0K1G8 114 aa8.17□□□□□ -1.1
HMGB3P4-201ENST00000428776 C16orf90A8MZG2 172 aa8.17□□□□□ -1.1
HMGB3P4-201ENST00000428776 LINC00337Q8N6G1 96 aa8.17□□□□□ -1.1
HMGB3P4-201ENST00000428776 KMT2AQ03164 3969 aa8.16□□□□□ -1.1
HMGB3P4-201ENST00000428776 TSPAN13O95857 204 aa8.16□□□□□ -1.1
HMGB3P4-201ENST00000428776 VPREB1P12018 145 aa8.16□□□□□ -1.1
HMGB3P4-201ENST00000428776 RPL13AP40429 203 aaKnown RBP8.16□□□□□ -1.1
HMGB3P4-201ENST00000428776 PRR3P79522 188 aaKnown RBP8.16□□□□□ -1.1
HMGB3P4-201ENST00000428776 SDIM1Q6ZPB5 146 aa8.16□□□□□ -1.1
HMGB3P4-201ENST00000428776 Q8NDZ9 215 aa8.16□□□□□ -1.1
HMGB3P4-201ENST00000428776 A0A096LNI7 61 aa8.15□□□□□ -1.1
HMGB3P4-201ENST00000428776 H3BUT2 72 aa8.15□□□□□ -1.1
HMGB3P4-201ENST00000428776 Q1RN00 199 aa8.15□□□□□ -1.1
HMGB3P4-201ENST00000428776 OR13C6PQ8NH95 151 aa8.15□□□□□ -1.1
HMGB3P4-201ENST00000428776 IGLV5-52A0A0A0MRZ9 124 aa8.14□□□□□ -1.11
HMGB3P4-201ENST00000428776 H7C2G1 150 aa8.14□□□□□ -1.11
HMGB3P4-201ENST00000428776 NCR3O14931 201 aa8.14□□□□□ -1.11
HMGB3P4-201ENST00000428776 TMEM126AQ9H061 195 aa8.14□□□□□ -1.11
HMGB3P4-201ENST00000428776 LINC00474Q9P2X8 69 aa8.14□□□□□ -1.11
HMGB3P4-201ENST00000428776 M0R378 163 aa8.13□□□□□ -1.11
HMGB3P4-201ENST00000428776 S100A7L2Q5SY68 101 aa8.13□□□□□ -1.11
HMGB3P4-201ENST00000428776 LINC00336Q6ZUF6 198 aa8.13□□□□□ -1.11
HMGB3P4-201ENST00000428776 DNAH2Q9P225 4427 aa8.13□□□□□ -1.11
HMGB3P4-201ENST00000428776 IGLV5-37A0A075B6J1 123 aa8.12□□□□□ -1.11
HMGB3P4-201ENST00000428776 IGKV2-24A0A0C4DH68 120 aa8.12□□□□□ -1.11
HMGB3P4-201ENST00000428776 A0A1W2PPM0 123 aa8.12□□□□□ -1.11
HMGB3P4-201ENST00000428776 LINC01620Q4KN68 170 aa8.12□□□□□ -1.11
HMGB3P4-201ENST00000428776 NKAPP1Q8N9T2 125 aa8.12□□□□□ -1.11
HMGB3P4-201ENST00000428776 NAA38Q9BRA0 125 aaKnown RBP8.12□□□□□ -1.11
HMGB3P4-201ENST00000428776 A0A1B0GV90 55 aa8.11□□□□□ -1.11
HMGB3P4-201ENST00000428776 PSMB2P49721 201 aa8.11□□□□□ -1.11
HMGB3P4-201ENST00000428776 SERTAD4-AS1Q5TG53 156 aa8.11□□□□□ -1.11
HMGB3P4-201ENST00000428776 FAM168BA1KXE4 195 aa8.1□□□□□ -1.11
HMGB3P4-201ENST00000428776 IGLV6-57P01721 117 aa8.1□□□□□ -1.11
HMGB3P4-201ENST00000428776 FABP2P12104 132 aa8.1□□□□□ -1.11
HMGB3P4-201ENST00000428776 RPL28P46779 137 aaKnown RBP8.1□□□□□ -1.11
HMGB3P4-201ENST00000428776 HYDINQ4G0P3 5121 aa8.09□□□□□ -1.11
HMGB3P4-201ENST00000428776 COX6CP09669 75 aa8.09□□□□□ -1.11
HMGB3P4-201ENST00000428776 LYRM7Q5U5X0 104 aa8.09□□□□□ -1.11
HMGB3P4-201ENST00000428776 KRTAP7-1Q8IUC3 87 aa8.09□□□□□ -1.11
HMGB3P4-201ENST00000428776 SMIM11BQ8TCY0 68 aa8.09□□□□□ -1.11
HMGB3P4-201ENST00000428776 CBY1Q9Y3M2 126 aa8.09□□□□□ -1.11
HMGB3P4-201ENST00000428776 DNAH17Q9UFH2 4485 aa8.08□□□□□ -1.12
HMGB3P4-201ENST00000428776 TRBV10-3A0A0K0K1G6 114 aa8.08□□□□□ -1.12
HMGB3P4-201ENST00000428776 TRIAP1O43715 76 aa8.08□□□□□ -1.12
HMGB3P4-201ENST00000428776 CHTF8P0CG12 524 aa8.08□□□□□ -1.12
HMGB3P4-201ENST00000428776 SCGB1C2P0DMR2 95 aa8.08□□□□□ -1.12
HMGB3P4-201ENST00000428776 FUSP35637 526 aaKnown RBP eCLIP8.08□□□□□ -1.12
HMGB3P4-201ENST00000428776 KRTAP10-2P60368 255 aa8.08□□□□□ -1.12
HMGB3P4-201ENST00000428776 FAM19A5Q7Z5A7 132 aaPredicted RBP8.08□□□□□ -1.12
HMGB3P4-201ENST00000428776 C7orf33Q8WU49 177 aa8.08□□□□□ -1.12
HMGB3P4-201ENST00000428776 C22orf24Q9Y442 160 aa8.08□□□□□ -1.12
HMGB3P4-201ENST00000428776 VAMP3Q15836 100 aa8.07□□□□□ -1.12
HMGB3P4-201ENST00000428776 SPACA4Q8TDM5 124 aa8.07□□□□□ -1.12
HMGB3P4-201ENST00000428776 A0A1W2PNN7 141 aa8.06□□□□□ -1.12
HMGB3P4-201ENST00000428776 MRPL55Q7Z7F7 128 aaKnown RBP8.06□□□□□ -1.12
HMGB3P4-201ENST00000428776 DPH3Q96FX2 82 aa8.06□□□□□ -1.12
HMGB3P4-201ENST00000428776 FRAS1Q86XX4 4008 aa8.06□□□□□ -1.12
HMGB3P4-201ENST00000428776 TRAV23DV6A0A075B6W5 121 aa8.05□□□□□ -1.12
HMGB3P4-201ENST00000428776 M0QXV9 152 aa8.05□□□□□ -1.12
HMGB3P4-201ENST00000428776 LINC00167Q96N53 147 aa8.05□□□□□ -1.12
HMGB3P4-201ENST00000428776 SPCS1Q9Y6A9 102 aa8.05□□□□□ -1.12
HMGB3P4-201ENST00000428776 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.05□□□□□ -1.12
HMGB3P4-201ENST00000428776 SACSQ9NZJ4 4579 aa8.05□□□□□ -1.12
HMGB3P4-201ENST00000428776 IGLV1-50A0A075B6I6 118 aa8.04□□□□□ -1.12
HMGB3P4-201ENST00000428776 TRBV20-1A0A075B6N2 111 aa8.04□□□□□ -1.12
HMGB3P4-201ENST00000428776 GAGE10A6NGK3 116 aa8.04□□□□□ -1.12
HMGB3P4-201ENST00000428776 EPM2AB3EWF7 344 aa8.04□□□□□ -1.12
HMGB3P4-201ENST00000428776 PANO1I0J062 215 aa8.04□□□□□ -1.12
HMGB3P4-201ENST00000428776 GTF2H5Q6ZYL4 71 aa8.04□□□□□ -1.12
HMGB3P4-201ENST00000428776 H0YGX0 51 aa8.03□□□□□ -1.12
HMGB3P4-201ENST00000428776 K7EP34 96 aa8.03□□□□□ -1.12
HMGB3P4-201ENST00000428776 KCNQ1DNQ9H478 68 aa8.03□□□□□ -1.12
HMGB3P4-201ENST00000428776 RPL37AP8A6NKH3 93 aa8.02□□□□□ -1.13
HMGB3P4-201ENST00000428776 ZNF73O43830 326 aaPredicted RBP8.02□□□□□ -1.13
HMGB3P4-201ENST00000428776 C6orf99Q4VX62 202 aa8.02□□□□□ -1.13
HMGB3P4-201ENST00000428776 A0A087WYN8 130 aa8.01□□□□□ -1.13
HMGB3P4-201ENST00000428776 TRBV7-6A0A0J9YX20 115 aa8.01□□□□□ -1.13
HMGB3P4-201ENST00000428776 PRYO14603 147 aa8.01□□□□□ -1.13
HMGB3P4-201ENST00000428776 TCL1BO95988 128 aa8.01□□□□□ -1.13
HMGB3P4-201ENST00000428776 DIRC1Q969H9 104 aa8.01□□□□□ -1.13
HMGB3P4-201ENST00000428776 HECTD4Q9Y4D8 3996 aa8.01□□□□□ -1.13
HMGB3P4-201ENST00000428776 PKD1P98161 4303 aa8□□□□□ -1.13
HMGB3P4-201ENST00000428776 UBE2V1Q13404 147 aa8□□□□□ -1.13
HMGB3P4-201ENST00000428776 ATXN8Q156A1 80 aa8□□□□□ -1.13
HMGB3P4-201ENST00000428776 CLEC2BQ92478 149 aa8□□□□□ -1.13
HMGB3P4-201ENST00000428776 PLAC8Q9NZF1 115 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms