RNA–Protein interactions for RNA: ENST00000428404.5

TRIM39-207, Transcript of tripartite motif containing 39, humanhuman

TSL 2

Gene TRIM39, Length 427 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-207ENST00000428404 GAGE2EQ4V326 116 aa7.99□□□□□ -1.13
TRIM39-207ENST00000428404 C9orf129Q5T035 196 aaKnown RBP7.99□□□□□ -1.13
TRIM39-207ENST00000428404 XAGE1AQ9HD64 81 aa7.99□□□□□ -1.13
TRIM39-207ENST00000428404 GAGE2DQ9UEU5 116 aa7.99□□□□□ -1.13
TRIM39-207ENST00000428404 GAGE2BQ13066 116 aa7.98□□□□□ -1.13
TRIM39-207ENST00000428404 CEND1Q8N111 149 aa7.98□□□□□ -1.13
TRIM39-207ENST00000428404 COPS9Q8WXC6 57 aa7.98□□□□□ -1.13
TRIM39-207ENST00000428404 PKHD1P08F94 4074 aa7.98□□□□□ -1.13
TRIM39-207ENST00000428404 DNAH8Q96JB1 4490 aa7.98□□□□□ -1.13
TRIM39-207ENST00000428404 NPC2P61916 151 aa7.97□□□□□ -1.13
TRIM39-207ENST00000428404 Q8NDZ9 215 aa7.96□□□□□ -1.14
TRIM39-207ENST00000428404 PLA2G2DQ9UNK4 145 aa7.96□□□□□ -1.14
TRIM39-207ENST00000428404 PCP4L1A6NKN8 68 aa7.95□□□□□ -1.14
TRIM39-207ENST00000428404 PANO1I0J062 215 aa7.95□□□□□ -1.14
TRIM39-207ENST00000428404 NDUFC2O95298 119 aa7.95□□□□□ -1.14
TRIM39-207ENST00000428404 CHTF8P0CG12 524 aa7.95□□□□□ -1.14
TRIM39-207ENST00000428404 FXYD2P54710 66 aa7.95□□□□□ -1.14
TRIM39-207ENST00000428404 RPL24P83731 157 aaKnown RBP7.95□□□□□ -1.14
TRIM39-207ENST00000428404 BVES-AS1Q5T3Y7 98 aa7.95□□□□□ -1.14
TRIM39-207ENST00000428404 KRTAP7-1Q8IUC3 87 aa7.95□□□□□ -1.14
TRIM39-207ENST00000428404 LINC00474Q9P2X8 69 aa7.95□□□□□ -1.14
TRIM39-207ENST00000428404 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.95□□□□□ -1.14
TRIM39-207ENST00000428404 IGKV2-24A0A0C4DH68 120 aa7.94□□□□□ -1.14
TRIM39-207ENST00000428404 A4D1N5 150 aa7.94□□□□□ -1.14
TRIM39-207ENST00000428404 EPM2AB3EWF7 344 aa7.94□□□□□ -1.14
TRIM39-207ENST00000428404 KRTAP10-1P60331 282 aa7.94□□□□□ -1.14
TRIM39-207ENST00000428404 SPACA4Q8TDM5 124 aa7.94□□□□□ -1.14
TRIM39-207ENST00000428404 DYNC1H1Q14204 4646 aaKnown RBP7.93□□□□□ -1.14
TRIM39-207ENST00000428404 IGLV5-37A0A075B6J1 123 aa7.93□□□□□ -1.14
TRIM39-207ENST00000428404 FAM168BA1KXE4 195 aa7.93□□□□□ -1.14
TRIM39-207ENST00000428404 VPREB1P12018 145 aa7.93□□□□□ -1.14
TRIM39-207ENST00000428404 HINT1P49773 126 aaPredicted RBP7.93□□□□□ -1.14
TRIM39-207ENST00000428404 SERTAD4-AS1Q5TG53 156 aa7.93□□□□□ -1.14
TRIM39-207ENST00000428404 IGKV2-28A0A075B6P5 120 aa7.92□□□□□ -1.14
TRIM39-207ENST00000428404 A0A1W2PNN7 141 aa7.92□□□□□ -1.14
TRIM39-207ENST00000428404 M0R143 59 aa7.92□□□□□ -1.14
TRIM39-207ENST00000428404 IGKV2D-28P01615 120 aa7.92□□□□□ -1.14
TRIM39-207ENST00000428404 PRR3P79522 188 aaKnown RBP7.92□□□□□ -1.14
TRIM39-207ENST00000428404 Q6ZSA8 131 aa7.92□□□□□ -1.14
TRIM39-207ENST00000428404 LRP1BQ9NZR2 4599 aa7.91□□□□□ -1.14
TRIM39-207ENST00000428404 A0A1B0GWB2 263 aa7.91□□□□□ -1.14
TRIM39-207ENST00000428404 CFC1BP0CG36 223 aa7.91□□□□□ -1.14
TRIM39-207ENST00000428404 CFC1P0CG37 223 aa7.91□□□□□ -1.14
TRIM39-207ENST00000428404 FAM30AQ9NZY2 134 aa7.91□□□□□ -1.14
TRIM39-207ENST00000428404 TRBV10-2A0A0K0K1G8 114 aa7.9□□□□□ -1.14
TRIM39-207ENST00000428404 TMEM238LA0A1B0GVL6 79 aa7.9□□□□□ -1.14
TRIM39-207ENST00000428404 A6NJY4 79 aa7.9□□□□□ -1.14
TRIM39-207ENST00000428404 LINC00337Q8N6G1 96 aa7.89□□□□□ -1.15
TRIM39-207ENST00000428404 C22orf24Q9Y442 160 aa7.89□□□□□ -1.15
TRIM39-207ENST00000428404 A0A087WYN8 130 aa7.88□□□□□ -1.15
TRIM39-207ENST00000428404 A0A0B4J2C4 111 aa7.88□□□□□ -1.15
TRIM39-207ENST00000428404 M0R378 163 aa7.88□□□□□ -1.15
TRIM39-207ENST00000428404 SNHG12Q9BXW3 62 aa7.88□□□□□ -1.15
TRIM39-207ENST00000428404 PLAC8Q9NZF1 115 aa7.88□□□□□ -1.15
TRIM39-207ENST00000428404 NCR3O14931 201 aa7.87□□□□□ -1.15
TRIM39-207ENST00000428404 FAM19A5Q7Z5A7 132 aaPredicted RBP7.87□□□□□ -1.15
TRIM39-207ENST00000428404 DPH3Q96FX2 82 aa7.87□□□□□ -1.15
TRIM39-207ENST00000428404 NHP2Q9NX24 153 aaKnown RBP7.87□□□□□ -1.15
TRIM39-207ENST00000428404 TRAV13-2A0A0B4J235 113 aa7.86□□□□□ -1.15
TRIM39-207ENST00000428404 A6NDN8 102 aa7.86□□□□□ -1.15
TRIM39-207ENST00000428404 IGLV6-57P01721 117 aa7.86□□□□□ -1.15
TRIM39-207ENST00000428404 NKAPP1Q8N9T2 125 aa7.86□□□□□ -1.15
TRIM39-207ENST00000428404 C7orf33Q8WU49 177 aa7.86□□□□□ -1.15
TRIM39-207ENST00000428404 K7ERJ3 54 aa7.85□□□□□ -1.15
TRIM39-207ENST00000428404 BATFQ16520 125 aa7.85□□□□□ -1.15
TRIM39-207ENST00000428404 MRPL55Q7Z7F7 128 aaKnown RBP7.85□□□□□ -1.15
TRIM39-207ENST00000428404 LINC00167Q96N53 147 aa7.85□□□□□ -1.15
TRIM39-207ENST00000428404 PRO1854Q9UHT4 67 aa7.85□□□□□ -1.15
TRIM39-207ENST00000428404 M0QXV9 152 aa7.84□□□□□ -1.15
TRIM39-207ENST00000428404 RAB37Q96AX2 223 aa7.84□□□□□ -1.15
TRIM39-207ENST00000428404 TRBV10-3A0A0K0K1G6 114 aa7.83□□□□□ -1.16
TRIM39-207ENST00000428404 LBHQ53QV2 105 aaPredicted RBP7.83□□□□□ -1.16
TRIM39-207ENST00000428404 SCXQ7RTU7 201 aa7.83□□□□□ -1.16
TRIM39-207ENST00000428404 CIRBP-AS1Q8TBR5 109 aa7.83□□□□□ -1.16
TRIM39-207ENST00000428404 TMEM126AQ9H061 195 aa7.83□□□□□ -1.16
TRIM39-207ENST00000428404 IGLV1-50A0A075B6I6 118 aa7.82□□□□□ -1.16
TRIM39-207ENST00000428404 GAGE10A6NGK3 116 aa7.82□□□□□ -1.16
TRIM39-207ENST00000428404 S100A7L2Q5SY68 101 aa7.82□□□□□ -1.16
TRIM39-207ENST00000428404 PHF5AQ7RTV0 110 aaKnown RBP7.82□□□□□ -1.16
TRIM39-207ENST00000428404 OR13C6PQ8NH95 151 aa7.82□□□□□ -1.16
TRIM39-207ENST00000428404 APOBP04114 4563 aaKnown RBP7.81□□□□□ -1.16
TRIM39-207ENST00000428404 RPL13AP40429 203 aaKnown RBP7.81□□□□□ -1.16
TRIM39-207ENST00000428404 KCNQ1DNQ9H478 68 aa7.81□□□□□ -1.16
TRIM39-207ENST00000428404 RPL37AP8A6NKH3 93 aa7.8□□□□□ -1.16
TRIM39-207ENST00000428404 XGP55808 180 aa7.8□□□□□ -1.16
TRIM39-207ENST00000428404 KRTAP11-1Q8IUC1 163 aa7.8□□□□□ -1.16
TRIM39-207ENST00000428404 COL5A1-AS1Q5SY13 56 aa7.79□□□□□ -1.16
TRIM39-207ENST00000428404 SMIM11BQ8TCY0 68 aa7.79□□□□□ -1.16
TRIM39-207ENST00000428404 TAX1BP3O14907 124 aa7.78□□□□□ -1.16
TRIM39-207ENST00000428404 TSPAN13O95857 204 aa7.78□□□□□ -1.16
TRIM39-207ENST00000428404 RPL28P46779 137 aaKnown RBP7.78□□□□□ -1.16
TRIM39-207ENST00000428404 TRAV23DV6A0A075B6W5 121 aa7.77□□□□□ -1.17
TRIM39-207ENST00000428404 H7C2G1 150 aa7.77□□□□□ -1.17
TRIM39-207ENST00000428404 PRYO14603 147 aa7.77□□□□□ -1.17
TRIM39-207ENST00000428404 HAMPP81172 84 aa7.77□□□□□ -1.17
TRIM39-207ENST00000428404 CBY1Q9Y3M2 126 aa7.77□□□□□ -1.17
TRIM39-207ENST00000428404 SPRR1AP35321 89 aa7.76□□□□□ -1.17
TRIM39-207ENST00000428404 EPPK1P58107 5090 aaKnown RBP7.75□□□□□ -1.17
TRIM39-207ENST00000428404 KRTAP4-16G5E9R7 235 aaPredicted RBP7.75□□□□□ -1.17
TRIM39-207ENST00000428404 ZNF73O43830 326 aaPredicted RBP7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms