RNA–Protein interactions for RNA: ENST00000427722.2

RFX3-AS1-202, RFX3 antisense RNA 1, humanhuman

TSL 5 BASIC

Gene RFX3-AS1, Length 1,088 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-AS1-202ENST00000427722 ODF1Q14990 250 aa5.62□□□□□ -1.51
RFX3-AS1-202ENST00000427722 DIRC1Q969H9 104 aa5.62□□□□□ -1.51
RFX3-AS1-202ENST00000427722 CHTOPQ9Y3Y2 248 aaKnown RBP5.62□□□□□ -1.51
RFX3-AS1-202ENST00000427722 C22orf24Q9Y442 160 aa5.62□□□□□ -1.51
RFX3-AS1-202ENST00000427722 PFN2P35080 140 aa5.61□□□□□ -1.51
RFX3-AS1-202ENST00000427722 LBHQ53QV2 105 aaPredicted RBP5.61□□□□□ -1.51
RFX3-AS1-202ENST00000427722 MRPL55Q7Z7F7 128 aaKnown RBP5.61□□□□□ -1.51
RFX3-AS1-202ENST00000427722 IFI27L1Q96BM0 104 aa5.61□□□□□ -1.51
RFX3-AS1-202ENST00000427722 HMCN2Q8NDA2 5059 aa5.6□□□□□ -1.51
RFX3-AS1-202ENST00000427722 H0Y9J4 135 aa5.6□□□□□ -1.51
RFX3-AS1-202ENST00000427722 FAM19A2Q8N3H0 131 aa5.6□□□□□ -1.51
RFX3-AS1-202ENST00000427722 ZNF625Q96I27 306 aaPredicted RBP5.6□□□□□ -1.51
RFX3-AS1-202ENST00000427722 TP73-AS1Q9UF72 201 aa5.6□□□□□ -1.51
RFX3-AS1-202ENST00000427722 GAGE10A6NGK3 116 aa5.59□□□□□ -1.51
RFX3-AS1-202ENST00000427722 H0Y8G0 127 aa5.59□□□□□ -1.51
RFX3-AS1-202ENST00000427722 SERF1AO75920 110 aa5.59□□□□□ -1.51
RFX3-AS1-202ENST00000427722 NKAPP1Q8N9T2 125 aa5.59□□□□□ -1.51
RFX3-AS1-202ENST00000427722 ERG28Q9UKR5 140 aa5.59□□□□□ -1.51
RFX3-AS1-202ENST00000427722 TRAV12-1A0A0B4J245 112 aa5.58□□□□□ -1.52
RFX3-AS1-202ENST00000427722 RPL37AP8A6NKH3 93 aa5.58□□□□□ -1.52
RFX3-AS1-202ENST00000427722 KRTAP10-8P60410 259 aa5.58□□□□□ -1.52
RFX3-AS1-202ENST00000427722 TMEM223A0PJW6 202 aa5.57□□□□□ -1.52
RFX3-AS1-202ENST00000427722 NUPR1O60356 82 aa5.57□□□□□ -1.52
RFX3-AS1-202ENST00000427722 SFTA2Q6UW10 78 aa5.57□□□□□ -1.52
RFX3-AS1-202ENST00000427722 PRR26Q8N8Z3 221 aa5.57□□□□□ -1.52
RFX3-AS1-202ENST00000427722 LINC00167Q96N53 147 aa5.57□□□□□ -1.52
RFX3-AS1-202ENST00000427722 SND1-IT1Q9HBX3 110 aa5.57□□□□□ -1.52
RFX3-AS1-202ENST00000427722 IGLV5-37A0A075B6J1 123 aa5.56□□□□□ -1.52
RFX3-AS1-202ENST00000427722 ZNF861PO60384 105 aa5.56□□□□□ -1.52
RFX3-AS1-202ENST00000427722 HIST1H2BKO60814 126 aa5.56□□□□□ -1.52
RFX3-AS1-202ENST00000427722 LEPROTL1O95214 131 aa5.56□□□□□ -1.52
RFX3-AS1-202ENST00000427722 HIST1H2BJP06899 126 aa5.56□□□□□ -1.52
RFX3-AS1-202ENST00000427722 HIST1H2BOP23527 126 aa5.56□□□□□ -1.52
RFX3-AS1-202ENST00000427722 HIST1H2BBP33778 126 aa5.56□□□□□ -1.52
RFX3-AS1-202ENST00000427722 HIST1H2BDP58876 126 aa5.56□□□□□ -1.52
RFX3-AS1-202ENST00000427722 HIST1H2BCP62807 126 aa5.56□□□□□ -1.52
RFX3-AS1-202ENST00000427722 HIST2H2BEQ16778 126 aa5.56□□□□□ -1.52
RFX3-AS1-202ENST00000427722 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.56□□□□□ -1.52
RFX3-AS1-202ENST00000427722 HIST1H2BHQ93079 126 aa5.56□□□□□ -1.52
RFX3-AS1-202ENST00000427722 HIST1H2BNQ99877 126 aa5.56□□□□□ -1.52
RFX3-AS1-202ENST00000427722 HIST1H2BMQ99879 126 aa5.56□□□□□ -1.52
RFX3-AS1-202ENST00000427722 TNXBP22105 4242 aa5.56□□□□□ -1.52
RFX3-AS1-202ENST00000427722 A0A0U1RRA0 63 aa5.55□□□□□ -1.52
RFX3-AS1-202ENST00000427722 BCE1O60756 84 aa5.55□□□□□ -1.52
RFX3-AS1-202ENST00000427722 KRTAP1-4P0C5Y4 121 aa5.55□□□□□ -1.52
RFX3-AS1-202ENST00000427722 VPREB1P12018 145 aa5.55□□□□□ -1.52
RFX3-AS1-202ENST00000427722 COX17Q14061 63 aa5.55□□□□□ -1.52
RFX3-AS1-202ENST00000427722 IGKV2-28A0A075B6P5 120 aa5.54□□□□□ -1.52
RFX3-AS1-202ENST00000427722 IGKV2D-28P01615 120 aa5.54□□□□□ -1.52
RFX3-AS1-202ENST00000427722 FABP4P15090 132 aa5.54□□□□□ -1.52
RFX3-AS1-202ENST00000427722 RPL28P46779 137 aaKnown RBP5.54□□□□□ -1.52
RFX3-AS1-202ENST00000427722 LINC00158P58513 81 aa5.54□□□□□ -1.52
RFX3-AS1-202ENST00000427722 HSPB8Q9UJY1 196 aa5.54□□□□□ -1.52
RFX3-AS1-202ENST00000427722 IGLV1-50A0A075B6I6 118 aa5.53□□□□□ -1.52
RFX3-AS1-202ENST00000427722 UBE2AP49459 152 aa5.53□□□□□ -1.52
RFX3-AS1-202ENST00000427722 RPL24P83731 157 aaKnown RBP5.53□□□□□ -1.52
RFX3-AS1-202ENST00000427722 MEIG1Q5JSS6 88 aa5.53□□□□□ -1.52
RFX3-AS1-202ENST00000427722 Q8NDZ9 215 aa5.53□□□□□ -1.52
RFX3-AS1-202ENST00000427722 KRTAP9-8Q9BYQ0 159 aa5.53□□□□□ -1.52
RFX3-AS1-202ENST00000427722 NDUFA12Q9UI09 145 aa5.53□□□□□ -1.52
RFX3-AS1-202ENST00000427722 SMIM13P0DJ93 91 aa5.52□□□□□ -1.53
RFX3-AS1-202ENST00000427722 PLNP26678 52 aa5.52□□□□□ -1.53
RFX3-AS1-202ENST00000427722 TSPEAR-AS2P59090 65 aa5.52□□□□□ -1.53
RFX3-AS1-202ENST00000427722 COA6Q5JTJ3 125 aaKnown RBP5.52□□□□□ -1.53
RFX3-AS1-202ENST00000427722 PMCHL2Q9BQD1 86 aa5.52□□□□□ -1.53
RFX3-AS1-202ENST00000427722 TMEM238C9JI98 176 aa5.51□□□□□ -1.53
RFX3-AS1-202ENST00000427722 DPM2O94777 84 aa5.51□□□□□ -1.53
RFX3-AS1-202ENST00000427722 KRTAP23-1A1A580 65 aa5.5□□□□□ -1.53
RFX3-AS1-202ENST00000427722 RPL13AP40429 203 aaKnown RBP5.5□□□□□ -1.53
RFX3-AS1-202ENST00000427722 HERVK_113P61574 105 aa5.5□□□□□ -1.53
RFX3-AS1-202ENST00000427722 HERV-K104P63124 156 aa5.5□□□□□ -1.53
RFX3-AS1-202ENST00000427722 PRLHP81277 87 aa5.5□□□□□ -1.53
RFX3-AS1-202ENST00000427722 KRTAP13-1Q8IUC0 172 aa5.5□□□□□ -1.53
RFX3-AS1-202ENST00000427722 MIR7-3HGQ8N6C7 128 aa5.5□□□□□ -1.53
RFX3-AS1-202ENST00000427722 MAP1LC3CQ9BXW4 147 aa5.5□□□□□ -1.53
RFX3-AS1-202ENST00000427722 TMEM126AQ9H061 195 aa5.5□□□□□ -1.53
RFX3-AS1-202ENST00000427722 MYMXA0A1B0GTQ4 84 aa5.49□□□□□ -1.53
RFX3-AS1-202ENST00000427722 NCR3O14931 201 aa5.49□□□□□ -1.53
RFX3-AS1-202ENST00000427722 LEPROTO15243 131 aa5.49□□□□□ -1.53
RFX3-AS1-202ENST00000427722 IGKCP01834 107 aa5.49□□□□□ -1.53
RFX3-AS1-202ENST00000427722 FAM19A1Q7Z5A9 133 aa5.49□□□□□ -1.53
RFX3-AS1-202ENST00000427722 BOD1L2Q8IYS8 172 aa5.49□□□□□ -1.53
RFX3-AS1-202ENST00000427722 PLEKHB2Q96CS7 222 aa5.49□□□□□ -1.53
RFX3-AS1-202ENST00000427722 J3QQQ9 107 aa5.48□□□□□ -1.53
RFX3-AS1-202ENST00000427722 M0R378 163 aa5.48□□□□□ -1.53
RFX3-AS1-202ENST00000427722 LGALS3P17931 250 aaKnown RBP5.48□□□□□ -1.53
RFX3-AS1-202ENST00000427722 A0A087X002 238 aa5.47□□□□□ -1.53
RFX3-AS1-202ENST00000427722 LINC00587B1AMM8 73 aa5.47□□□□□ -1.53
RFX3-AS1-202ENST00000427722 DAND5Q8N907 189 aa5.47□□□□□ -1.53
RFX3-AS1-202ENST00000427722 ANAPC11Q9NYG5 84 aa5.47□□□□□ -1.53
RFX3-AS1-202ENST00000427722 UBR4Q5T4S7 5183 aa5.46□□□□□ -1.53
RFX3-AS1-202ENST00000427722 SYS1-DBNDD2H3BUS1 97 aa5.46□□□□□ -1.54
RFX3-AS1-202ENST00000427722 CRYGAP11844 174 aa5.46□□□□□ -1.54
RFX3-AS1-202ENST00000427722 NMUP48645 174 aa5.45□□□□□ -1.54
RFX3-AS1-202ENST00000427722 HIGD2AQ9BW72 106 aa5.45□□□□□ -1.54
RFX3-AS1-202ENST00000427722 LRP2P98164 4655 aa5.44□□□□□ -1.54
RFX3-AS1-202ENST00000427722 IGKV2D-26A0A0A0MRZ7 120 aa5.44□□□□□ -1.54
RFX3-AS1-202ENST00000427722 TRBV10-3A0A0K0K1G6 114 aa5.44□□□□□ -1.54
RFX3-AS1-202ENST00000427722 C5orf52A6NGY3 159 aa5.44□□□□□ -1.54
RFX3-AS1-202ENST00000427722 PRYO14603 147 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms