RNA–Protein interactions for RNA: ENST00000427534.6

SPG11-202, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 6,935 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-202ENST00000427534 PTPRBP23467 1997 aa9.07□□□□□ -0.96
SPG11-202ENST00000427534 Q96NJ1 140 aa9.07□□□□□ -0.96
SPG11-202ENST00000427534 LINC00588Q9Y4M8 146 aa9.07□□□□□ -0.96
SPG11-202ENST00000427534 TRBV7-7A0A0K0K1E9 115 aa9.07□□□□□ -0.96
SPG11-202ENST00000427534 C9orf92A6NGG3 77 aa9.06□□□□□ -0.96
SPG11-202ENST00000427534 NDUFC1O43677 76 aa9.06□□□□□ -0.96
SPG11-202ENST00000427534 V9GYY9 64 aa9.06□□□□□ -0.96
SPG11-202ENST00000427534 NBDYA0A0U1RRE5 68 aa9.05□□□□□ -0.96
SPG11-202ENST00000427534 hDV103S1A0JD37 113 aa9.04□□□□□ -0.96
SPG11-202ENST00000427534 C1orf64Q8NEQ6 169 aa9.04□□□□□ -0.96
SPG11-202ENST00000427534 FAM19A4Q96LR4 140 aa9.04□□□□□ -0.96
SPG11-202ENST00000427534 LINC01546A6NGU7 62 aa9.04□□□□□ -0.96
SPG11-202ENST00000427534 COX6B2Q6YFQ2 88 aa9.04□□□□□ -0.96
SPG11-202ENST00000427534 ATP5EP56381 51 aaPredicted RBP9.03□□□□□ -0.96
SPG11-202ENST00000427534 LINC01561Q8N1V8 128 aa9.03□□□□□ -0.96
SPG11-202ENST00000427534 ZFYVE26Q68DK2 2539 aa9.03□□□□□ -0.96
SPG11-202ENST00000427534 F8WDY8 70 aa9.03□□□□□ -0.96
SPG11-202ENST00000427534 EPM2AB3EWF7 344 aa9.03□□□□□ -0.96
SPG11-202ENST00000427534 LINC00846Q9NV44 126 aa9.02□□□□□ -0.96
SPG11-202ENST00000427534 PMAIP1Q13794 54 aa9.02□□□□□ -0.97
SPG11-202ENST00000427534 COL4A2P08572 1712 aa9.02□□□□□ -0.97
SPG11-202ENST00000427534 KRTAP10-11P60412 298 aa9.01□□□□□ -0.97
SPG11-202ENST00000427534 TRAV7A0A075B6U4 112 aa9.01□□□□□ -0.97
SPG11-202ENST00000427534 DNAH12Q6ZR08 3092 aa9□□□□□ -0.97
SPG11-202ENST00000427534 WWC2-AS2Q96NR7 200 aa9□□□□□ -0.97
SPG11-202ENST00000427534 FN1P02751 2386 aaKnown RBP9□□□□□ -0.97
SPG11-202ENST00000427534 IGLV5-39A0A0G2JS06 123 aa8.99□□□□□ -0.97
SPG11-202ENST00000427534 ABCA12Q86UK0 2595 aa8.99□□□□□ -0.97
SPG11-202ENST00000427534 USP9XQ93008 2570 aaPredicted RBP8.99□□□□□ -0.97
SPG11-202ENST00000427534 ANKRD11Q6UB99 2663 aaPredicted RBP8.99□□□□□ -0.97
SPG11-202ENST00000427534 LINC00313P59037 77 aa8.98□□□□□ -0.97
SPG11-202ENST00000427534 ANAPC11Q9NYG5 84 aa8.97□□□□□ -0.97
SPG11-202ENST00000427534 SPATA3Q8NHX4 192 aa8.97□□□□□ -0.97
SPG11-202ENST00000427534 TMEM254Q8TBM7 123 aa8.96□□□□□ -0.97
SPG11-202ENST00000427534 SPAG11AQ6PDA7 123 aa8.96□□□□□ -0.98
SPG11-202ENST00000427534 A0A0G2JQZ4 141 aa8.96□□□□□ -0.98
SPG11-202ENST00000427534 A0A1W2PNN7 141 aa8.96□□□□□ -0.98
SPG11-202ENST00000427534 IGHV3OR16-9A0A0B4J2B5 98 aa8.95□□□□□ -0.98
SPG11-202ENST00000427534 Q6ZRP5 223 aa8.95□□□□□ -0.98
SPG11-202ENST00000427534 C1orf195Q5TG92 126 aa8.95□□□□□ -0.98
SPG11-202ENST00000427534 LINC00476Q8WZB0 136 aa8.95□□□□□ -0.98
SPG11-202ENST00000427534 FAM218AQ96MZ4 157 aa8.94□□□□□ -0.98
SPG11-202ENST00000427534 Q8NAQ8 132 aa8.94□□□□□ -0.98
SPG11-202ENST00000427534 TLN2Q9Y4G6 2542 aa8.93□□□□□ -0.98
SPG11-202ENST00000427534 ATP11AUNQ6ZP68 121 aa8.93□□□□□ -0.98
SPG11-202ENST00000427534 A0A1B0GU69 56 aa8.92□□□□□ -0.98
SPG11-202ENST00000427534 K7EIL1 84 aa8.92□□□□□ -0.98
SPG11-202ENST00000427534 USP9YO00507 2555 aaPredicted RBP8.9□□□□□ -0.98
SPG11-202ENST00000427534 KRTAP10-3P60369 221 aa8.9□□□□□ -0.98
SPG11-202ENST00000427534 IGLV5-45A0A087WSX0 123 aa8.89□□□□□ -0.99
SPG11-202ENST00000427534 DSCR10P59022 87 aa8.89□□□□□ -0.99
SPG11-202ENST00000427534 ZNF462Q96JM2 2506 aa8.88□□□□□ -0.99
SPG11-202ENST00000427534 C5orf42Q9H799 3197 aa8.88□□□□□ -0.99
SPG11-202ENST00000427534 PCNTO95613 3336 aa8.87□□□□□ -0.99
SPG11-202ENST00000427534 KLK9Q2XQG4 91 aa8.87□□□□□ -0.99
SPG11-202ENST00000427534 CDIP1Q9H305 208 aa8.87□□□□□ -0.99
SPG11-202ENST00000427534 SMIM26A0A096LP01 95 aa8.87□□□□□ -0.99
SPG11-202ENST00000427534 SETD2Q9BYW2 2564 aaPredicted RBP8.86□□□□□ -0.99
SPG11-202ENST00000427534 Q8NBF4 154 aa8.86□□□□□ -0.99
SPG11-202ENST00000427534 CHD8Q9HCK8 2581 aa8.86□□□□□ -0.99
SPG11-202ENST00000427534 OBSCN-AS1Q96MR7 158 aa8.85□□□□□ -0.99
SPG11-202ENST00000427534 Q6ZRX8 168 aa8.84□□□□□ -0.99
SPG11-202ENST00000427534 PCSK5Q92824 1860 aa8.84□□□□□ -0.99
SPG11-202ENST00000427534 H3BNG1 76 aa8.84□□□□□ -0.99
SPG11-202ENST00000427534 ELOF1P60002 83 aaKnown RBP8.83□□□□□ -1
SPG11-202ENST00000427534 LINC01554Q52M75 96 aa8.83□□□□□ -1
SPG11-202ENST00000427534 APLNQ9ULZ1 77 aa8.83□□□□□ -1
SPG11-202ENST00000427534 BCE1O60756 84 aa8.83□□□□□ -1
SPG11-202ENST00000427534 IGLV6-57P01721 117 aa8.82□□□□□ -1
SPG11-202ENST00000427534 SMCPP49901 116 aaPredicted RBP8.82□□□□□ -1
SPG11-202ENST00000427534 TM2D3Q9BRN9 247 aa8.82□□□□□ -1
SPG11-202ENST00000427534 ACYP2P14621 99 aa8.81□□□□□ -1
SPG11-202ENST00000427534 C15orf56Q8N910 161 aa8.8□□□□□ -1
SPG11-202ENST00000427534 CXCL6P80162 114 aa8.8□□□□□ -1
SPG11-202ENST00000427534 SPTBN4Q9H254 2564 aa8.79□□□□□ -1
SPG11-202ENST00000427534 PRO0461Q9UI25 63 aa8.77□□□□□ -1
SPG11-202ENST00000427534 CASC10Q5T4H9 136 aa8.77□□□□□ -1.01
SPG11-202ENST00000427534 K7EQZ3 153 aa8.76□□□□□ -1.01
SPG11-202ENST00000427534 ANKRD17O75179 2603 aaKnown RBP8.76□□□□□ -1.01
SPG11-202ENST00000427534 SPINT4Q6UDR6 99 aa8.76□□□□□ -1.01
SPG11-202ENST00000427534 LINC00304Q8N9R0 145 aa8.75□□□□□ -1.01
SPG11-202ENST00000427534 POLQO75417 2590 aa8.75□□□□□ -1.01
SPG11-202ENST00000427534 PKD1L2Q7Z442 2459 aa8.74□□□□□ -1.01
SPG11-202ENST00000427534 GVQW2A0A096LPI5 108 aaPredicted RBP8.74□□□□□ -1.01
SPG11-202ENST00000427534 Q6ZQT0 140 aa8.73□□□□□ -1.01
SPG11-202ENST00000427534 MTORP42345 2549 aa8.73□□□□□ -1.01
SPG11-202ENST00000427534 SSBP3-AS1Q7Z2R9 100 aa8.73□□□□□ -1.01
SPG11-202ENST00000427534 LITAFQ99732 161 aa8.72□□□□□ -1.01
SPG11-202ENST00000427534 A0A0D9SG42 100 aa8.7□□□□□ -1.02
SPG11-202ENST00000427534 ACANP16112 2415 aa8.7□□□□□ -1.02
SPG11-202ENST00000427534 A0A087WTM6 91 aa8.7□□□□□ -1.02
SPG11-202ENST00000427534 C4orf26Q17RF5 130 aa8.7□□□□□ -1.02
SPG11-202ENST00000427534 TRBV7-4A0A0J9YYF1 115 aa8.69□□□□□ -1.02
SPG11-202ENST00000427534 IGLV5-37A0A075B6J1 123 aa8.68□□□□□ -1.02
SPG11-202ENST00000427534 TP53AIP1Q9HCN2 124 aa8.68□□□□□ -1.02
SPG11-202ENST00000427534 VPREB1P12018 145 aa8.68□□□□□ -1.02
SPG11-202ENST00000427534 CSNK1G2-AS1Q8NCQ2 148 aa8.68□□□□□ -1.02
SPG11-202ENST00000427534 TRAV22A0A0B4J277 110 aa8.68□□□□□ -1.02
SPG11-202ENST00000427534 LOC110117498A0A087WWA1 95 aa8.67□□□□□ -1.02
SPG11-202ENST00000427534 IGLV1-50A0A075B6I6 118 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms