RNA–Protein interactions for RNA: ENST00000427383.6

CHEK1-202, Transcript of checkpoint kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CHEK1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-202ENST00000427383 Q6ZRP5 223 aa11.1□□□□□ -0.63
CHEK1-202ENST00000427383 Q8N814 137 aa11.09□□□□□ -0.63
CHEK1-202ENST00000427383 LCE6AA0A183 80 aa11.08□□□□□ -0.64
CHEK1-202ENST00000427383 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.08□□□□□ -0.64
CHEK1-202ENST00000427383 Q8NDZ9 215 aa11.08□□□□□ -0.64
CHEK1-202ENST00000427383 IGKV2-28A0A075B6P5 120 aa11.07□□□□□ -0.64
CHEK1-202ENST00000427383 IGKV2D-28P01615 120 aa11.07□□□□□ -0.64
CHEK1-202ENST00000427383 XAGE1AQ9HD64 81 aa11.06□□□□□ -0.64
CHEK1-202ENST00000427383 PKD1P98161 4303 aa11.06□□□□□ -0.64
CHEK1-202ENST00000427383 RTL8CO15255 209 aa11.05□□□□□ -0.64
CHEK1-202ENST00000427383 NDUFC2O95298 119 aa11.05□□□□□ -0.64
CHEK1-202ENST00000427383 DNAH5Q8TE73 4624 aa11.05□□□□□ -0.64
CHEK1-202ENST00000427383 RAB37Q96AX2 223 aa11.04□□□□□ -0.64
CHEK1-202ENST00000427383 PRO1854Q9UHT4 67 aa11.04□□□□□ -0.64
CHEK1-202ENST00000427383 RPL18AQ02543 176 aaKnown RBP11.03□□□□□ -0.64
CHEK1-202ENST00000427383 GAGE2EQ4V326 116 aa11.03□□□□□ -0.64
CHEK1-202ENST00000427383 C9orf129Q5T035 196 aaKnown RBP11.03□□□□□ -0.64
CHEK1-202ENST00000427383 LINC00337Q8N6G1 96 aa11.03□□□□□ -0.64
CHEK1-202ENST00000427383 C9orf163Q8N9P6 203 aa11.03□□□□□ -0.64
CHEK1-202ENST00000427383 GAGE2DQ9UEU5 116 aa11.03□□□□□ -0.64
CHEK1-202ENST00000427383 LOC107984640A0A0U1RRK4 108 aa11.02□□□□□ -0.64
CHEK1-202ENST00000427383 TNP2Q05952 138 aa11.01□□□□□ -0.65
CHEK1-202ENST00000427383 PGPEP1Q9NXJ5 209 aa11.01□□□□□ -0.65
CHEK1-202ENST00000427383 C9orf118A6NHY6 69 aa11.01□□□□□ -0.65
CHEK1-202ENST00000427383 TSPAN13O95857 204 aa11.01□□□□□ -0.65
CHEK1-202ENST00000427383 PRR3P79522 188 aaKnown RBP10.99□□□□□ -0.65
CHEK1-202ENST00000427383 TRAV13-2A0A0B4J235 113 aa10.98□□□□□ -0.65
CHEK1-202ENST00000427383 VPREB1P12018 145 aa10.98□□□□□ -0.65
CHEK1-202ENST00000427383 RPL13AP40429 203 aaKnown RBP10.98□□□□□ -0.65
CHEK1-202ENST00000427383 NAA38Q9BRA0 125 aaKnown RBP10.98□□□□□ -0.65
CHEK1-202ENST00000427383 A0A096LNI7 61 aa10.98□□□□□ -0.65
CHEK1-202ENST00000427383 C16orf90A8MZG2 172 aa10.98□□□□□ -0.65
CHEK1-202ENST00000427383 H3BUT2 72 aa10.97□□□□□ -0.65
CHEK1-202ENST00000427383 PLA2G2DQ9UNK4 145 aa10.97□□□□□ -0.65
CHEK1-202ENST00000427383 TRBV10-2A0A0K0K1G8 114 aa10.96□□□□□ -0.65
CHEK1-202ENST00000427383 GAGE2BQ13066 116 aa10.96□□□□□ -0.65
CHEK1-202ENST00000427383 SDIM1Q6ZPB5 146 aa10.96□□□□□ -0.65
CHEK1-202ENST00000427383 A0A1B0GV90 55 aa10.95□□□□□ -0.66
CHEK1-202ENST00000427383 NCR3O14931 201 aa10.95□□□□□ -0.66
CHEK1-202ENST00000427383 LINC01620Q4KN68 170 aa10.95□□□□□ -0.66
CHEK1-202ENST00000427383 SERTAD4-AS1Q5TG53 156 aa10.95□□□□□ -0.66
CHEK1-202ENST00000427383 KRTAP7-1Q8IUC3 87 aa10.95□□□□□ -0.66
CHEK1-202ENST00000427383 A0A1W2PPM0 123 aa10.94□□□□□ -0.66
CHEK1-202ENST00000427383 H7C2G1 150 aa10.94□□□□□ -0.66
CHEK1-202ENST00000427383 PKIGQ9Y2B9 76 aa10.94□□□□□ -0.66
CHEK1-202ENST00000427383 PKHD1P08F94 4074 aa10.93□□□□□ -0.66
CHEK1-202ENST00000427383 FAM168BA1KXE4 195 aa10.93□□□□□ -0.66
CHEK1-202ENST00000427383 FUSP35637 526 aaKnown RBP eCLIP10.93□□□□□ -0.66
CHEK1-202ENST00000427383 IGLV5-37A0A075B6J1 123 aa10.92□□□□□ -0.66
CHEK1-202ENST00000427383 RYR3Q15413 4870 aa10.92□□□□□ -0.66
CHEK1-202ENST00000427383 DNAH8Q96JB1 4490 aa10.92□□□□□ -0.66
CHEK1-202ENST00000427383 IGLV6-57P01721 117 aa10.92□□□□□ -0.66
CHEK1-202ENST00000427383 IGKV2-24A0A0C4DH68 120 aa10.91□□□□□ -0.66
CHEK1-202ENST00000427383 TRIAP1O43715 76 aa10.91□□□□□ -0.66
CHEK1-202ENST00000427383 Q1RN00 199 aa10.91□□□□□ -0.66
CHEK1-202ENST00000427383 TMEM126AQ9H061 195 aa10.91□□□□□ -0.66
CHEK1-202ENST00000427383 IGLV5-52A0A0A0MRZ9 124 aa10.9□□□□□ -0.66
CHEK1-202ENST00000427383 CHTF8P0CG12 524 aa10.9□□□□□ -0.66
CHEK1-202ENST00000427383 M0R378 163 aa10.89□□□□□ -0.67
CHEK1-202ENST00000427383 RPL28P46779 137 aaKnown RBP10.89□□□□□ -0.67
CHEK1-202ENST00000427383 KRTAP10-2P60368 255 aa10.89□□□□□ -0.67
CHEK1-202ENST00000427383 OR13C6PQ8NH95 151 aa10.89□□□□□ -0.67
CHEK1-202ENST00000427383 SMIM11BQ8TCY0 68 aa10.89□□□□□ -0.67
CHEK1-202ENST00000427383 PANO1I0J062 215 aa10.89□□□□□ -0.67
CHEK1-202ENST00000427383 FABP2P12104 132 aa10.88□□□□□ -0.67
CHEK1-202ENST00000427383 S100A7L2Q5SY68 101 aa10.88□□□□□ -0.67
CHEK1-202ENST00000427383 TRBV10-3A0A0K0K1G6 114 aa10.87□□□□□ -0.67
CHEK1-202ENST00000427383 LINC00474Q9P2X8 69 aa10.87□□□□□ -0.67
CHEK1-202ENST00000427383 A0A1W2PNN7 141 aa10.86□□□□□ -0.67
CHEK1-202ENST00000427383 PSMB2P49721 201 aa10.86□□□□□ -0.67
CHEK1-202ENST00000427383 FAM19A5Q7Z5A7 132 aaPredicted RBP10.86□□□□□ -0.67
CHEK1-202ENST00000427383 NKAPP1Q8N9T2 125 aa10.86□□□□□ -0.67
CHEK1-202ENST00000427383 SPACA4Q8TDM5 124 aa10.86□□□□□ -0.67
CHEK1-202ENST00000427383 C7orf33Q8WU49 177 aa10.85□□□□□ -0.67
CHEK1-202ENST00000427383 C22orf24Q9Y442 160 aa10.85□□□□□ -0.67
CHEK1-202ENST00000427383 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.85□□□□□ -0.67
CHEK1-202ENST00000427383 LINC00336Q6ZUF6 198 aa10.85□□□□□ -0.67
CHEK1-202ENST00000427383 VAMP3Q15836 100 aa10.84□□□□□ -0.67
CHEK1-202ENST00000427383 EPM2AB3EWF7 344 aa10.83□□□□□ -0.68
CHEK1-202ENST00000427383 LYRM7Q5U5X0 104 aa10.83□□□□□ -0.68
CHEK1-202ENST00000427383 MRPL55Q7Z7F7 128 aaKnown RBP10.83□□□□□ -0.68
CHEK1-202ENST00000427383 SPCS1Q9Y6A9 102 aa10.83□□□□□ -0.68
CHEK1-202ENST00000427383 K7EP34 96 aa10.82□□□□□ -0.68
CHEK1-202ENST00000427383 TRAV23DV6A0A075B6W5 121 aa10.82□□□□□ -0.68
CHEK1-202ENST00000427383 GAGE10A6NGK3 116 aa10.82□□□□□ -0.68
CHEK1-202ENST00000427383 M0QXV9 152 aa10.82□□□□□ -0.68
CHEK1-202ENST00000427383 COX6CP09669 75 aa10.81□□□□□ -0.68
CHEK1-202ENST00000427383 LINC00167Q96N53 147 aa10.81□□□□□ -0.68
CHEK1-202ENST00000427383 LRP1BQ9NZR2 4599 aa10.8□□□□□ -0.68
CHEK1-202ENST00000427383 IGLV1-50A0A075B6I6 118 aa10.8□□□□□ -0.68
CHEK1-202ENST00000427383 TCL1BO95988 128 aa10.8□□□□□ -0.68
CHEK1-202ENST00000427383 SCGB1C2P0DMR2 95 aa10.8□□□□□ -0.68
CHEK1-202ENST00000427383 TRBV20-1A0A075B6N2 111 aa10.79□□□□□ -0.68
CHEK1-202ENST00000427383 C6orf99Q4VX62 202 aa10.79□□□□□ -0.68
CHEK1-202ENST00000427383 KCNQ1DNQ9H478 68 aa10.79□□□□□ -0.68
CHEK1-202ENST00000427383 ZNF73O43830 326 aaPredicted RBP10.78□□□□□ -0.68
CHEK1-202ENST00000427383 CLEC2BQ92478 149 aa10.78□□□□□ -0.68
CHEK1-202ENST00000427383 A0A1B0GVY2 172 aa10.77□□□□□ -0.69
CHEK1-202ENST00000427383 UBE2V1Q13404 147 aa10.77□□□□□ -0.69
CHEK1-202ENST00000427383 GTF2H5Q6ZYL4 71 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms