RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 MAP1LC3CQ9BXW4 147 aa3.52□□□□□ -1.85
C9orf3-205ENST00000427193 ANAPC11Q9NYG5 84 aa3.52□□□□□ -1.85
C9orf3-205ENST00000427193 MRPL35Q9NZE8 188 aaKnown RBP3.52□□□□□ -1.85
C9orf3-205ENST00000427193 KLK12Q9UKR0 248 aa3.52□□□□□ -1.85
C9orf3-205ENST00000427193 A0A087WZ39 114 aa3.51□□□□□ -1.85
C9orf3-205ENST00000427193 A0A0J9YXV3 536 aa3.51□□□□□ -1.85
C9orf3-205ENST00000427193 C11orf86A6NJI1 115 aa3.51□□□□□ -1.85
C9orf3-205ENST00000427193 TMEM262E9PQX1 116 aa3.51□□□□□ -1.85
C9orf3-205ENST00000427193 M0QXV9 152 aa3.51□□□□□ -1.85
C9orf3-205ENST00000427193 IGHV3-30P01768 117 aa3.51□□□□□ -1.85
C9orf3-205ENST00000427193 IGHV3-33P01772 117 aa3.51□□□□□ -1.85
C9orf3-205ENST00000427193 IGHV3-30-3P0DP02 117 aa3.51□□□□□ -1.85
C9orf3-205ENST00000427193 IGHV3-30-5P0DP03 117 aa3.51□□□□□ -1.85
C9orf3-205ENST00000427193 JOSD1Q15040 202 aaPredicted RBP3.51□□□□□ -1.85
C9orf3-205ENST00000427193 RNASE13Q5GAN3 156 aaKnown RBP3.51□□□□□ -1.85
C9orf3-205ENST00000427193 AMMECR1LQ6DCA0 310 aa3.51□□□□□ -1.85
C9orf3-205ENST00000427193 TEX43Q6ZNM6 134 aa3.51□□□□□ -1.85
C9orf3-205ENST00000427193 Q6ZVH6 145 aa3.51□□□□□ -1.85
C9orf3-205ENST00000427193 OR10D4PQ8NGN7 298 aa3.51□□□□□ -1.85
C9orf3-205ENST00000427193 CHCHD10Q8WYQ3 142 aaPredicted RBP3.51□□□□□ -1.85
C9orf3-205ENST00000427193 TMEM101Q96IK0 257 aa3.51□□□□□ -1.85
C9orf3-205ENST00000427193 TRAV9-2A0A087WT02 112 aa3.5□□□□□ -1.85
C9orf3-205ENST00000427193 TRAV8-3A0A0A6YYJ7 113 aa3.5□□□□□ -1.85
C9orf3-205ENST00000427193 ANGP03950 147 aaKnown RBP3.5□□□□□ -1.85
C9orf3-205ENST00000427193 ZNF22P17026 224 aaPredicted RBP3.5□□□□□ -1.85
C9orf3-205ENST00000427193 S100A2P29034 98 aa3.5□□□□□ -1.85
C9orf3-205ENST00000427193 KIAA0087Q14695 138 aa3.5□□□□□ -1.85
C9orf3-205ENST00000427193 TTC32Q5I0X7 151 aa3.5□□□□□ -1.85
C9orf3-205ENST00000427193 Q6ZN92 141 aa3.5□□□□□ -1.85
C9orf3-205ENST00000427193 UBE2WQ96B02 151 aa3.5□□□□□ -1.85
C9orf3-205ENST00000427193 CDKN2A-AS1Q9UH64 79 aa3.5□□□□□ -1.85
C9orf3-205ENST00000427193 TRAV13-1A0A0B4J241 112 aa3.49□□□□□ -1.85
C9orf3-205ENST00000427193 TMEM223A0PJW6 202 aa3.49□□□□□ -1.85
C9orf3-205ENST00000427193 LRCOL1A6NCL2 159 aa3.49□□□□□ -1.85
C9orf3-205ENST00000427193 M0R2N4 97 aa3.49□□□□□ -1.85
C9orf3-205ENST00000427193 DPM2O94777 84 aa3.49□□□□□ -1.85
C9orf3-205ENST00000427193 PLNP26678 52 aa3.49□□□□□ -1.85
C9orf3-205ENST00000427193 KRTDAPP60985 99 aa3.49□□□□□ -1.85
C9orf3-205ENST00000427193 HERVK_113P63121 156 aa3.49□□□□□ -1.85
C9orf3-205ENST00000427193 SEC11AP67812 179 aa3.49□□□□□ -1.85
C9orf3-205ENST00000427193 C2orf88Q9BSF0 95 aa3.49□□□□□ -1.85
C9orf3-205ENST00000427193 CHAC1Q9BUX1 264 aa3.49□□□□□ -1.85
C9orf3-205ENST00000427193 LRP2P98164 4655 aa3.48□□□□□ -1.85
C9orf3-205ENST00000427193 GVQW2A0A096LPI5 108 aaPredicted RBP3.48□□□□□ -1.85
C9orf3-205ENST00000427193 IGKCP01834 107 aa3.48□□□□□ -1.85
C9orf3-205ENST00000427193 SMIM6P0DI80 62 aa3.48□□□□□ -1.85
C9orf3-205ENST00000427193 AKR1D1P51857 326 aa3.48□□□□□ -1.85
C9orf3-205ENST00000427193 WFDC2Q14508 124 aa3.48□□□□□ -1.85
C9orf3-205ENST00000427193 SS18Q15532 418 aa3.48□□□□□ -1.85
C9orf3-205ENST00000427193 C1orf134Q5TEV5 83 aa3.48□□□□□ -1.85
C9orf3-205ENST00000427193 CLPSL2Q6UWE3 100 aa3.48□□□□□ -1.85
C9orf3-205ENST00000427193 UBE2DNLQ8IWF7 75 aa3.48□□□□□ -1.85
C9orf3-205ENST00000427193 C15orf56Q8N910 161 aa3.48□□□□□ -1.85
C9orf3-205ENST00000427193 LINC00167Q96N53 147 aa3.48□□□□□ -1.85
C9orf3-205ENST00000427193 PMCHL2Q9BQD1 86 aa3.48□□□□□ -1.85
C9orf3-205ENST00000427193 IGLV10-54A0A075B6I4 117 aa3.47□□□□□ -1.85
C9orf3-205ENST00000427193 IGHV3-64A0A075B6Q5 118 aa3.47□□□□□ -1.85
C9orf3-205ENST00000427193 IGKV2D-26A0A0A0MRZ7 120 aa3.47□□□□□ -1.85
C9orf3-205ENST00000427193 IGHV1-58A0A0C4DH39 117 aa3.47□□□□□ -1.85
C9orf3-205ENST00000427193 E9PLD3 99 aa3.47□□□□□ -1.85
C9orf3-205ENST00000427193 COX7A2LO14548 114 aa3.47□□□□□ -1.85
C9orf3-205ENST00000427193 CRPP02741 224 aa3.47□□□□□ -1.85
C9orf3-205ENST00000427193 XCL1P47992 114 aa3.47□□□□□ -1.85
C9orf3-205ENST00000427193 SRSF9Q13242 221 aaKnown RBP eCLIP3.47□□□□□ -1.85
C9orf3-205ENST00000427193 Q5VSD8 79 aa3.47□□□□□ -1.85
C9orf3-205ENST00000427193 ZNF625Q96I27 306 aaPredicted RBP3.47□□□□□ -1.85
C9orf3-205ENST00000427193 C20orf202A1L168 122 aa3.46□□□□□ -1.86
C9orf3-205ENST00000427193 TSPEAR-AS2P59090 65 aa3.46□□□□□ -1.86
C9orf3-205ENST00000427193 C5orf38Q86SI9 138 aa3.46□□□□□ -1.86
C9orf3-205ENST00000427193 C6orf223Q8N319 242 aa3.46□□□□□ -1.86
C9orf3-205ENST00000427193 RMI2Q96E14 147 aa3.46□□□□□ -1.86
C9orf3-205ENST00000427193 C12orf57Q99622 126 aa3.46□□□□□ -1.86
C9orf3-205ENST00000427193 V9GYY9 64 aa3.46□□□□□ -1.86
C9orf3-205ENST00000427193 PKHD1L1Q86WI1 4243 aa3.46□□□□□ -1.86
C9orf3-205ENST00000427193 IGKV2D-24A0A075B6R9 120 aa3.45□□□□□ -1.86
C9orf3-205ENST00000427193 IGKV3OR2-268A0A0C4DH90 116 aa3.45□□□□□ -1.86
C9orf3-205ENST00000427193 CNBPP62633 177 aaKnown RBP3.45□□□□□ -1.86
C9orf3-205ENST00000427193 Q8IZM0 81 aa3.45□□□□□ -1.86
C9orf3-205ENST00000427193 ATOH7Q8N100 152 aa3.45□□□□□ -1.86
C9orf3-205ENST00000427193 Q9HAA7 133 aa3.45□□□□□ -1.86
C9orf3-205ENST00000427193 A0A087WTM6 91 aa3.44□□□□□ -1.86
C9orf3-205ENST00000427193 A0A1B0GV72 72 aa3.44□□□□□ -1.86
C9orf3-205ENST00000427193 H3BRM9 83 aa3.44□□□□□ -1.86
C9orf3-205ENST00000427193 LEPROTO15243 131 aa3.44□□□□□ -1.86
C9orf3-205ENST00000427193 DLEU1O43261 78 aa3.44□□□□□ -1.86
C9orf3-205ENST00000427193 SPINK8P0C7L1 97 aa3.44□□□□□ -1.86
C9orf3-205ENST00000427193 TMEM170BQ5T4T1 132 aa3.44□□□□□ -1.86
C9orf3-205ENST00000427193 REG3GQ6UW15 175 aa3.44□□□□□ -1.86
C9orf3-205ENST00000427193 FAT4Q6V0I7 4981 aa3.44□□□□□ -1.86
C9orf3-205ENST00000427193 LRP1Q07954 4544 aaKnown RBP3.43□□□□□ -1.86
C9orf3-205ENST00000427193 LINC00587B1AMM8 73 aa3.43□□□□□ -1.86
C9orf3-205ENST00000427193 J3QQQ9 107 aa3.43□□□□□ -1.86
C9orf3-205ENST00000427193 NDUFA1O15239 70 aa3.43□□□□□ -1.86
C9orf3-205ENST00000427193 NMUP48645 174 aa3.43□□□□□ -1.86
C9orf3-205ENST00000427193 PCP2Q8IVA1 136 aa3.43□□□□□ -1.86
C9orf3-205ENST00000427193 COX7B2Q8TF08 81 aa3.43□□□□□ -1.86
C9orf3-205ENST00000427193 PLEKHB2Q96CS7 222 aa3.43□□□□□ -1.86
C9orf3-205ENST00000427193 LOC107984156A0A0G2JMH3 177 aa3.42□□□□□ -1.86
C9orf3-205ENST00000427193 APOMO95445 188 aa3.42□□□□□ -1.86
C9orf3-205ENST00000427193 TSPAN13O95857 204 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms