RNA–Protein interactions for RNA: ENST00000425537.1

HMGB4-201, Transcript of high mobility group box 4, humanhuman

TSL 1 (best)

Gene HMGB4, Length 630 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-201ENST00000425537 CARD19Q96LW7 228 aa6.29□□□□□ -1.4
HMGB4-201ENST00000425537 C6orf48Q9UBA6 75 aa6.29□□□□□ -1.4
HMGB4-201ENST00000425537 IGKV2-28A0A075B6P5 120 aa6.28□□□□□ -1.4
HMGB4-201ENST00000425537 TRBV10-2A0A0K0K1G8 114 aa6.28□□□□□ -1.4
HMGB4-201ENST00000425537 C9JAW5 83 aa6.28□□□□□ -1.4
HMGB4-201ENST00000425537 NDUFC2-KCTD14E9PQ53 114 aa6.28□□□□□ -1.4
HMGB4-201ENST00000425537 LST1O00453 97 aa6.28□□□□□ -1.4
HMGB4-201ENST00000425537 IGKV2D-28P01615 120 aa6.28□□□□□ -1.4
HMGB4-201ENST00000425537 C14orf177Q52M58 125 aa6.28□□□□□ -1.4
HMGB4-201ENST00000425537 OCIAD2Q56VL3 154 aa6.28□□□□□ -1.4
HMGB4-201ENST00000425537 C9orf116Q5BN46 136 aaPredicted RBP6.28□□□□□ -1.4
HMGB4-201ENST00000425537 C10orf25Q5T742 122 aa6.28□□□□□ -1.4
HMGB4-201ENST00000425537 LINC00337Q8N6G1 96 aa6.28□□□□□ -1.4
HMGB4-201ENST00000425537 H3BT86 120 aa6.27□□□□□ -1.41
HMGB4-201ENST00000425537 SLC25A20O43772 301 aa6.27□□□□□ -1.41
HMGB4-201ENST00000425537 TRACP01848 142 aa6.27□□□□□ -1.41
HMGB4-201ENST00000425537 S100A7L2Q5SY68 101 aa6.27□□□□□ -1.41
HMGB4-201ENST00000425537 PRO0461Q9UI25 63 aa6.27□□□□□ -1.41
HMGB4-201ENST00000425537 USP17L23D6RBM5 183 aa6.26□□□□□ -1.41
HMGB4-201ENST00000425537 PSCAO43653 123 aa6.26□□□□□ -1.41
HMGB4-201ENST00000425537 WFDC2Q14508 124 aa6.26□□□□□ -1.41
HMGB4-201ENST00000425537 Q6ZRU5 148 aa6.26□□□□□ -1.41
HMGB4-201ENST00000425537 LINC00526Q96FQ7 95 aa6.26□□□□□ -1.41
HMGB4-201ENST00000425537 LINC01600Q96MT4 127 aa6.26□□□□□ -1.41
HMGB4-201ENST00000425537 PKIGQ9Y2B9 76 aa6.26□□□□□ -1.41
HMGB4-201ENST00000425537 STAB2Q8WWQ8 2551 aa6.25□□□□□ -1.41
HMGB4-201ENST00000425537 A0A1B0GX51 115 aa6.25□□□□□ -1.41
HMGB4-201ENST00000425537 DNAL4O96015 105 aa6.25□□□□□ -1.41
HMGB4-201ENST00000425537 TEN1Q86WV5 123 aa6.25□□□□□ -1.41
HMGB4-201ENST00000425537 ANKRD29Q8N6D5 301 aa6.25□□□□□ -1.41
HMGB4-201ENST00000425537 SMIM11BQ8TCY0 68 aa6.25□□□□□ -1.41
HMGB4-201ENST00000425537 TLX1NBP0CAT3 122 aa6.24□□□□□ -1.41
HMGB4-201ENST00000425537 ETDBQ3ZM63 59 aa6.24□□□□□ -1.41
HMGB4-201ENST00000425537 CASC10Q5T4H9 136 aa6.24□□□□□ -1.41
HMGB4-201ENST00000425537 CLEC2BQ92478 149 aa6.24□□□□□ -1.41
HMGB4-201ENST00000425537 M0R378 163 aa6.23□□□□□ -1.41
HMGB4-201ENST00000425537 PPDPFLQ8WWR9 84 aa6.23□□□□□ -1.41
HMGB4-201ENST00000425537 LOC107984640A0A0U1RRK4 108 aa6.22□□□□□ -1.41
HMGB4-201ENST00000425537 NCR3O14931 201 aa6.22□□□□□ -1.41
HMGB4-201ENST00000425537 LINC00528Q8N1L1 170 aa6.22□□□□□ -1.41
HMGB4-201ENST00000425537 NBDYA0A0U1RRE5 68 aa6.21□□□□□ -1.42
HMGB4-201ENST00000425537 H3BQ85 93 aa6.21□□□□□ -1.42
HMGB4-201ENST00000425537 GHRHP01286 108 aa6.21□□□□□ -1.42
HMGB4-201ENST00000425537 IGLV6-57P01721 117 aa6.21□□□□□ -1.42
HMGB4-201ENST00000425537 LORP23490 312 aaPredicted RBP6.21□□□□□ -1.42
HMGB4-201ENST00000425537 RPL18AQ02543 176 aaKnown RBP6.21□□□□□ -1.42
HMGB4-201ENST00000425537 MTURNQ8N3F0 131 aa6.21□□□□□ -1.42
HMGB4-201ENST00000425537 NKAPP1Q8N9T2 125 aa6.21□□□□□ -1.42
HMGB4-201ENST00000425537 XAGE1AQ9HD64 81 aa6.21□□□□□ -1.42
HMGB4-201ENST00000425537 PLA2G2DQ9UNK4 145 aa6.21□□□□□ -1.42
HMGB4-201ENST00000425537 C3orf84H3BNL1 204 aa6.2□□□□□ -1.42
HMGB4-201ENST00000425537 GAGE2EQ4V326 116 aa6.2□□□□□ -1.42
HMGB4-201ENST00000425537 GAGE2DQ9UEU5 116 aa6.2□□□□□ -1.42
HMGB4-201ENST00000425537 TRBV7-6A0A0J9YX20 115 aa6.19□□□□□ -1.42
HMGB4-201ENST00000425537 VPREB1P12018 145 aa6.19□□□□□ -1.42
HMGB4-201ENST00000425537 PRR3P79522 188 aaKnown RBP6.19□□□□□ -1.42
HMGB4-201ENST00000425537 DNAH7Q8WXX0 4024 aa6.18□□□□□ -1.42
HMGB4-201ENST00000425537 TRAV23DV6A0A075B6W5 121 aa6.18□□□□□ -1.42
HMGB4-201ENST00000425537 BAALC-AS2P0C853 105 aa6.18□□□□□ -1.42
HMGB4-201ENST00000425537 CNBPP62633 177 aaKnown RBP6.18□□□□□ -1.42
HMGB4-201ENST00000425537 Q6ZRP5 223 aa6.18□□□□□ -1.42
HMGB4-201ENST00000425537 DIRC1Q969H9 104 aa6.18□□□□□ -1.42
HMGB4-201ENST00000425537 VPS25Q9BRG1 176 aa6.18□□□□□ -1.42
HMGB4-201ENST00000425537 TRBV10-3A0A0K0K1G6 114 aa6.17□□□□□ -1.42
HMGB4-201ENST00000425537 LECT2O14960 151 aa6.17□□□□□ -1.42
HMGB4-201ENST00000425537 C6orf99Q4VX62 202 aa6.17□□□□□ -1.42
HMGB4-201ENST00000425537 ORMDL1Q9P0S3 153 aa6.17□□□□□ -1.42
HMGB4-201ENST00000425537 IGLV5-37A0A075B6J1 123 aa6.16□□□□□ -1.42
HMGB4-201ENST00000425537 INAFM2P0DMQ5 153 aa6.16□□□□□ -1.42
HMGB4-201ENST00000425537 KRTAP1-5Q9BYS1 174 aa6.16□□□□□ -1.42
HMGB4-201ENST00000425537 STARD9Q9P2P6 4700 aa6.16□□□□□ -1.42
HMGB4-201ENST00000425537 A0A087WYN8 130 aa6.15□□□□□ -1.42
HMGB4-201ENST00000425537 ZNF73O43830 326 aaPredicted RBP6.15□□□□□ -1.42
HMGB4-201ENST00000425537 COX7BP24311 80 aa6.15□□□□□ -1.42
HMGB4-201ENST00000425537 Q8N814 137 aa6.15□□□□□ -1.42
HMGB4-201ENST00000425537 Q8NDZ9 215 aa6.15□□□□□ -1.42
HMGB4-201ENST00000425537 FAM218AQ96MZ4 157 aa6.15□□□□□ -1.42
HMGB4-201ENST00000425537 CSMD3Q7Z407 3707 aa6.15□□□□□ -1.43
HMGB4-201ENST00000425537 hADV29S1A0JD25 119 aa6.14□□□□□ -1.43
HMGB4-201ENST00000425537 TMEM256-PLSCR3K7ERE1 68 aa6.14□□□□□ -1.43
HMGB4-201ENST00000425537 LY6G6CO95867 125 aa6.14□□□□□ -1.43
HMGB4-201ENST00000425537 SLPIP03973 132 aa6.14□□□□□ -1.43
HMGB4-201ENST00000425537 GAGE2BQ13066 116 aa6.14□□□□□ -1.43
HMGB4-201ENST00000425537 C9orf129Q5T035 196 aaKnown RBP6.14□□□□□ -1.43
HMGB4-201ENST00000425537 LINC00575Q6W349 94 aa6.14□□□□□ -1.43
HMGB4-201ENST00000425537 LINC00167Q96N53 147 aa6.14□□□□□ -1.43
HMGB4-201ENST00000425537 C16orf90A8MZG2 172 aa6.13□□□□□ -1.43
HMGB4-201ENST00000425537 LINC00474Q9P2X8 69 aa6.13□□□□□ -1.43
HMGB4-201ENST00000425537 JMJD7-PLA2G4BH0Y9G9 81 aa6.12□□□□□ -1.43
HMGB4-201ENST00000425537 PRYO14603 147 aa6.12□□□□□ -1.43
HMGB4-201ENST00000425537 ACYP1P07311 99 aa6.12□□□□□ -1.43
HMGB4-201ENST00000425537 ELOF1P60002 83 aaKnown RBP6.12□□□□□ -1.43
HMGB4-201ENST00000425537 KCNQ1DNQ9H478 68 aa6.12□□□□□ -1.43
HMGB4-201ENST00000425537 TENM2Q9NT68 2774 aa6.12□□□□□ -1.43
HMGB4-201ENST00000425537 LCE6AA0A183 80 aa6.11□□□□□ -1.43
HMGB4-201ENST00000425537 TEX49A0A1B0GTD5 131 aa6.11□□□□□ -1.43
HMGB4-201ENST00000425537 C21orf62-AS1Q17RA5 79 aa6.11□□□□□ -1.43
HMGB4-201ENST00000425537 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.11□□□□□ -1.43
HMGB4-201ENST00000425537 C7orf33Q8WU49 177 aa6.11□□□□□ -1.43
HMGB4-201ENST00000425537 LINC00476Q8WZB0 136 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms