RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 F8WDY8 70 aa10.35□□□□□ -0.75
SHOX2-202ENST00000425436 TCL1BO95988 128 aa10.35□□□□□ -0.75
SHOX2-202ENST00000425436 TNP2Q05952 138 aa10.35□□□□□ -0.75
SHOX2-202ENST00000425436 GVQW2A0A096LPI5 108 aaPredicted RBP10.34□□□□□ -0.75
SHOX2-202ENST00000425436 C2orf82Q6UX34 121 aa10.34□□□□□ -0.75
SHOX2-202ENST00000425436 C1orf43Q9BWL3 253 aa10.34□□□□□ -0.75
SHOX2-202ENST00000425436 IGKV2D-24A0A075B6R9 120 aa10.33□□□□□ -0.76
SHOX2-202ENST00000425436 K7ERU9 68 aa10.33□□□□□ -0.76
SHOX2-202ENST00000425436 TRIAP1O43715 76 aa10.33□□□□□ -0.76
SHOX2-202ENST00000425436 PRO0461Q9UI25 63 aa10.33□□□□□ -0.76
SHOX2-202ENST00000425436 PSCAO43653 123 aa10.32□□□□□ -0.76
SHOX2-202ENST00000425436 NDUFC2O95298 119 aa10.32□□□□□ -0.76
SHOX2-202ENST00000425436 OCIAD2Q56VL3 154 aa10.32□□□□□ -0.76
SHOX2-202ENST00000425436 LINC00336Q6ZUF6 198 aa10.32□□□□□ -0.76
SHOX2-202ENST00000425436 ZNF561-AS1K7EIQ3 104 aa10.31□□□□□ -0.76
SHOX2-202ENST00000425436 M0QXV9 152 aa10.31□□□□□ -0.76
SHOX2-202ENST00000425436 KRTAP26-1Q6PEX3 210 aa10.31□□□□□ -0.76
SHOX2-202ENST00000425436 NTN5Q8WTR8 489 aaPredicted RBP10.31□□□□□ -0.76
SHOX2-202ENST00000425436 RMI2Q96E14 147 aa10.3□□□□□ -0.76
SHOX2-202ENST00000425436 PKD1P98161 4303 aa10.3□□□□□ -0.76
SHOX2-202ENST00000425436 WFDC2Q14508 124 aa10.29□□□□□ -0.76
SHOX2-202ENST00000425436 C2orf48Q96LS8 159 aa10.29□□□□□ -0.76
SHOX2-202ENST00000425436 RPL28P46779 137 aaKnown RBP10.28□□□□□ -0.76
SHOX2-202ENST00000425436 UNQ6190/PRO20217Q6UXQ8 127 aa10.28□□□□□ -0.76
SHOX2-202ENST00000425436 IGKV2-28A0A075B6P5 120 aa10.28□□□□□ -0.76
SHOX2-202ENST00000425436 J3QR89 54 aa10.28□□□□□ -0.76
SHOX2-202ENST00000425436 IGKV2D-28P01615 120 aa10.28□□□□□ -0.76
SHOX2-202ENST00000425436 LECT2O14960 151 aa10.27□□□□□ -0.77
SHOX2-202ENST00000425436 LINC01600Q96MT4 127 aa10.27□□□□□ -0.77
SHOX2-202ENST00000425436 DNAH11Q96DT5 4516 aa10.27□□□□□ -0.77
SHOX2-202ENST00000425436 A0A087WTM6 91 aa10.26□□□□□ -0.77
SHOX2-202ENST00000425436 LST1O00453 97 aa10.26□□□□□ -0.77
SHOX2-202ENST00000425436 LINC01620Q4KN68 170 aa10.26□□□□□ -0.77
SHOX2-202ENST00000425436 LRCOL1A6NCL2 159 aa10.25□□□□□ -0.77
SHOX2-202ENST00000425436 LINC00337Q8N6G1 96 aa10.25□□□□□ -0.77
SHOX2-202ENST00000425436 CAMK2N2Q96S95 79 aa10.25□□□□□ -0.77
SHOX2-202ENST00000425436 EPPK1P58107 5090 aaKnown RBP10.25□□□□□ -0.77
SHOX2-202ENST00000425436 TRBV10-2A0A0K0K1G8 114 aa10.24□□□□□ -0.77
SHOX2-202ENST00000425436 A0A1B0GVY2 172 aa10.24□□□□□ -0.77
SHOX2-202ENST00000425436 H0YGX0 51 aa10.24□□□□□ -0.77
SHOX2-202ENST00000425436 SLC25A20O43772 301 aa10.24□□□□□ -0.77
SHOX2-202ENST00000425436 C10orf25Q5T742 122 aa10.24□□□□□ -0.77
SHOX2-202ENST00000425436 HECTD4Q9Y4D8 3996 aa10.24□□□□□ -0.77
SHOX2-202ENST00000425436 C9JAW5 83 aa10.23□□□□□ -0.77
SHOX2-202ENST00000425436 FUSP35637 526 aaKnown RBP eCLIP10.23□□□□□ -0.77
SHOX2-202ENST00000425436 ETDBQ3ZM63 59 aa10.23□□□□□ -0.77
SHOX2-202ENST00000425436 C9orf116Q5BN46 136 aaPredicted RBP10.23□□□□□ -0.77
SHOX2-202ENST00000425436 OR13C6PQ8NH95 151 aa10.23□□□□□ -0.77
SHOX2-202ENST00000425436 TMEM126AQ9H061 195 aa10.23□□□□□ -0.77
SHOX2-202ENST00000425436 H3BT86 120 aa10.22□□□□□ -0.77
SHOX2-202ENST00000425436 SMCPP49901 116 aaPredicted RBP10.22□□□□□ -0.77
SHOX2-202ENST00000425436 ANKRD29Q8N6D5 301 aa10.22□□□□□ -0.77
SHOX2-202ENST00000425436 C15orf56Q8N910 161 aa10.22□□□□□ -0.77
SHOX2-202ENST00000425436 CARD19Q96LW7 228 aa10.22□□□□□ -0.77
SHOX2-202ENST00000425436 C6orf48Q9UBA6 75 aa10.22□□□□□ -0.77
SHOX2-202ENST00000425436 TRACP01848 142 aa10.21□□□□□ -0.78
SHOX2-202ENST00000425436 TEN1Q86WV5 123 aa10.21□□□□□ -0.78
SHOX2-202ENST00000425436 KRTAP10-2P60368 255 aa10.2□□□□□ -0.78
SHOX2-202ENST00000425436 HIGD2BQ4VC39 106 aa10.2□□□□□ -0.78
SHOX2-202ENST00000425436 LCE2AQ5TA79 106 aaPredicted RBP10.2□□□□□ -0.78
SHOX2-202ENST00000425436 MTURNQ8N3F0 131 aa10.2□□□□□ -0.78
SHOX2-202ENST00000425436 SMIM11BQ8TCY0 68 aa10.2□□□□□ -0.78
SHOX2-202ENST00000425436 CLEC2BQ92478 149 aa10.2□□□□□ -0.78
SHOX2-202ENST00000425436 LINC00526Q96FQ7 95 aa10.2□□□□□ -0.78
SHOX2-202ENST00000425436 PKHD1P08F94 4074 aa10.2□□□□□ -0.78
SHOX2-202ENST00000425436 RNF151Q2KHN1 245 aa10.19□□□□□ -0.78
SHOX2-202ENST00000425436 USP17L23D6RBM5 183 aa10.18□□□□□ -0.78
SHOX2-202ENST00000425436 Q8N814 137 aa10.18□□□□□ -0.78
SHOX2-202ENST00000425436 PPDPFLQ8WWR9 84 aa10.18□□□□□ -0.78
SHOX2-202ENST00000425436 SYCNQ0VAF6 134 aa10.17□□□□□ -0.78
SHOX2-202ENST00000425436 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.17□□□□□ -0.78
SHOX2-202ENST00000425436 NDUFC2-KCTD14E9PQ53 114 aa10.17□□□□□ -0.78
SHOX2-202ENST00000425436 Q6ZRU5 148 aa10.17□□□□□ -0.78
SHOX2-202ENST00000425436 S100A7L2Q5SY68 101 aa10.16□□□□□ -0.78
SHOX2-202ENST00000425436 CBY1Q9Y3M2 126 aa10.16□□□□□ -0.78
SHOX2-202ENST00000425436 A0A1B0GX51 115 aa10.15□□□□□ -0.78
SHOX2-202ENST00000425436 SNCGO76070 127 aa10.15□□□□□ -0.78
SHOX2-202ENST00000425436 DNAH5Q8TE73 4624 aa10.13□□□□□ -0.79
SHOX2-202ENST00000425436 DNAL4O96015 105 aa10.12□□□□□ -0.79
SHOX2-202ENST00000425436 VPS25Q9BRG1 176 aa10.12□□□□□ -0.79
SHOX2-202ENST00000425436 TLX1NBP0CAT3 122 aa10.12□□□□□ -0.79
SHOX2-202ENST00000425436 PRR3P79522 188 aaKnown RBP10.12□□□□□ -0.79
SHOX2-202ENST00000425436 C14orf177Q52M58 125 aa10.12□□□□□ -0.79
SHOX2-202ENST00000425436 IGLV5-52A0A0A0MRZ9 124 aa10.11□□□□□ -0.79
SHOX2-202ENST00000425436 C16orf90A8MZG2 172 aa10.11□□□□□ -0.79
SHOX2-202ENST00000425436 NCR3O14931 201 aa10.1□□□□□ -0.79
SHOX2-202ENST00000425436 IGLV6-57P01721 117 aa10.1□□□□□ -0.79
SHOX2-202ENST00000425436 DYNC1H1Q14204 4646 aaKnown RBP10.1□□□□□ -0.79
SHOX2-202ENST00000425436 M0R378 163 aa10.08□□□□□ -0.8
SHOX2-202ENST00000425436 BAALC-AS2P0C853 105 aa10.08□□□□□ -0.8
SHOX2-202ENST00000425436 FAM218AQ96MZ4 157 aa10.08□□□□□ -0.8
SHOX2-202ENST00000425436 XAGE1AQ9HD64 81 aa10.08□□□□□ -0.8
SHOX2-202ENST00000425436 SLPIP03973 132 aa10.07□□□□□ -0.8
SHOX2-202ENST00000425436 RPL18AQ02543 176 aaKnown RBP10.07□□□□□ -0.8
SHOX2-202ENST00000425436 Q8NDZ9 215 aa10.07□□□□□ -0.8
SHOX2-202ENST00000425436 VPREB1P12018 145 aa10.06□□□□□ -0.8
SHOX2-202ENST00000425436 GAGE2EQ4V326 116 aa10.06□□□□□ -0.8
SHOX2-202ENST00000425436 Q6ZRP5 223 aa10.06□□□□□ -0.8
SHOX2-202ENST00000425436 GAGE2DQ9UEU5 116 aa10.06□□□□□ -0.8
SHOX2-202ENST00000425436 PLA2G2DQ9UNK4 145 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms