RNA–Protein interactions for RNA: ENST00000424339.1

EPHA4-206, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 492 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-206ENST00000424339 J3QQQ9 107 aa4.62□□□□□ -1.67
EPHA4-206ENST00000424339 KRTAP5-11Q6L8G4 156 aa4.62□□□□□ -1.67
EPHA4-206ENST00000424339 Q8N814 137 aa4.62□□□□□ -1.67
EPHA4-206ENST00000424339 CDKN2A-AS1Q9UH64 79 aa4.62□□□□□ -1.67
EPHA4-206ENST00000424339 SACSQ9NZJ4 4579 aa4.62□□□□□ -1.67
EPHA4-206ENST00000424339 F8W1H4 67 aa4.61□□□□□ -1.67
EPHA4-206ENST00000424339 TSPAN13O95857 204 aa4.61□□□□□ -1.67
EPHA4-206ENST00000424339 CXCL5P42830 114 aa4.61□□□□□ -1.67
EPHA4-206ENST00000424339 CNBPP62633 177 aaKnown RBP4.61□□□□□ -1.67
EPHA4-206ENST00000424339 TMEM170BQ5T4T1 132 aa4.61□□□□□ -1.67
EPHA4-206ENST00000424339 SCGB1D4Q6XE38 83 aa4.61□□□□□ -1.67
EPHA4-206ENST00000424339 C5orf38Q86SI9 138 aa4.61□□□□□ -1.67
EPHA4-206ENST00000424339 C2orf48Q96LS8 159 aa4.61□□□□□ -1.67
EPHA4-206ENST00000424339 VPS25Q9BRG1 176 aa4.61□□□□□ -1.67
EPHA4-206ENST00000424339 KMT2CQ8NEZ4 4911 aaKnown RBP4.6□□□□□ -1.67
EPHA4-206ENST00000424339 PRSS2P07478 247 aa4.6□□□□□ -1.67
EPHA4-206ENST00000424339 LGALS3P17931 250 aaKnown RBP4.6□□□□□ -1.67
EPHA4-206ENST00000424339 COX6A2Q02221 97 aa4.6□□□□□ -1.67
EPHA4-206ENST00000424339 SRSF9Q13242 221 aaKnown RBP eCLIP4.6□□□□□ -1.67
EPHA4-206ENST00000424339 Q8IZM0 81 aa4.6□□□□□ -1.67
EPHA4-206ENST00000424339 C15orf56Q8N910 161 aa4.6□□□□□ -1.67
EPHA4-206ENST00000424339 HYDINQ4G0P3 5121 aa4.59□□□□□ -1.67
EPHA4-206ENST00000424339 IGLV5-39A0A0G2JS06 123 aa4.59□□□□□ -1.67
EPHA4-206ENST00000424339 A4D1N5 150 aa4.59□□□□□ -1.67
EPHA4-206ENST00000424339 SMIM1B2RUZ4 78 aa4.59□□□□□ -1.67
EPHA4-206ENST00000424339 CFC1BP0CG36 223 aa4.59□□□□□ -1.67
EPHA4-206ENST00000424339 CFC1P0CG37 223 aa4.59□□□□□ -1.67
EPHA4-206ENST00000424339 SPAG11BQ08648 103 aa4.59□□□□□ -1.67
EPHA4-206ENST00000424339 WFDC2Q14508 124 aa4.59□□□□□ -1.67
EPHA4-206ENST00000424339 LYRM7Q5U5X0 104 aa4.59□□□□□ -1.67
EPHA4-206ENST00000424339 A0A0A0MQY5 61 aa4.58□□□□□ -1.68
EPHA4-206ENST00000424339 A0A0B4J2C4 111 aa4.58□□□□□ -1.68
EPHA4-206ENST00000424339 H3BMG7 143 aa4.58□□□□□ -1.68
EPHA4-206ENST00000424339 LECT2O14960 151 aa4.58□□□□□ -1.68
EPHA4-206ENST00000424339 NDUFA1O15239 70 aa4.58□□□□□ -1.68
EPHA4-206ENST00000424339 CKS1BP61024 79 aa4.58□□□□□ -1.68
EPHA4-206ENST00000424339 SYCNQ0VAF6 134 aa4.58□□□□□ -1.68
EPHA4-206ENST00000424339 C6orf226Q5I0X4 101 aa4.58□□□□□ -1.68
EPHA4-206ENST00000424339 CAMK2N2Q96S95 79 aa4.58□□□□□ -1.68
EPHA4-206ENST00000424339 LITAFQ99732 161 aa4.58□□□□□ -1.68
EPHA4-206ENST00000424339 RYR2Q92736 4967 aa4.58□□□□□ -1.68
EPHA4-206ENST00000424339 IGLV5-52A0A0A0MRZ9 124 aa4.57□□□□□ -1.68
EPHA4-206ENST00000424339 A0A0J9YXY3 114 aa4.57□□□□□ -1.68
EPHA4-206ENST00000424339 TRBV30A0A0K0K1B3 111 aa4.57□□□□□ -1.68
EPHA4-206ENST00000424339 A0A1B0GVY2 172 aa4.57□□□□□ -1.68
EPHA4-206ENST00000424339 TMEM238C9JI98 176 aa4.57□□□□□ -1.68
EPHA4-206ENST00000424339 TIMM17BO60830 172 aa4.57□□□□□ -1.68
EPHA4-206ENST00000424339 RPL24P83731 157 aaKnown RBP4.57□□□□□ -1.68
EPHA4-206ENST00000424339 HIGD2BQ4VC39 106 aa4.57□□□□□ -1.68
EPHA4-206ENST00000424339 C9orf163Q8N9P6 203 aa4.57□□□□□ -1.68
EPHA4-206ENST00000424339 COX7B2Q8TF08 81 aa4.57□□□□□ -1.68
EPHA4-206ENST00000424339 CARD19Q96LW7 228 aa4.57□□□□□ -1.68
EPHA4-206ENST00000424339 SPANXDQ9BXN6 97 aa4.57□□□□□ -1.68
EPHA4-206ENST00000424339 SPANXCQ9NY87 97 aa4.57□□□□□ -1.68
EPHA4-206ENST00000424339 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.56□□□□□ -1.68
EPHA4-206ENST00000424339 TRBV20-1A0A075B6N2 111 aa4.56□□□□□ -1.68
EPHA4-206ENST00000424339 M0QXV9 152 aa4.56□□□□□ -1.68
EPHA4-206ENST00000424339 SPINK8P0C7L1 97 aa4.56□□□□□ -1.68
EPHA4-206ENST00000424339 HERV-K104P63124 156 aa4.56□□□□□ -1.68
EPHA4-206ENST00000424339 KIAA0087Q14695 138 aa4.56□□□□□ -1.68
EPHA4-206ENST00000424339 ETDBQ3ZM63 59 aa4.56□□□□□ -1.68
EPHA4-206ENST00000424339 TOMM7Q9P0U1 55 aa4.56□□□□□ -1.68
EPHA4-206ENST00000424339 LINC00474Q9P2X8 69 aa4.56□□□□□ -1.68
EPHA4-206ENST00000424339 PRO1854Q9UHT4 67 aa4.56□□□□□ -1.68
EPHA4-206ENST00000424339 J3QR89 54 aa4.55□□□□□ -1.68
EPHA4-206ENST00000424339 TCL1BO95988 128 aa4.55□□□□□ -1.68
EPHA4-206ENST00000424339 MUSTN1Q8IVN3 82 aa4.55□□□□□ -1.68
EPHA4-206ENST00000424339 LINC01600Q96MT4 127 aa4.55□□□□□ -1.68
EPHA4-206ENST00000424339 NDUFA12Q9UI09 145 aa4.55□□□□□ -1.68
EPHA4-206ENST00000424339 LOC107984156A0A0G2JMH3 177 aa4.54□□□□□ -1.68
EPHA4-206ENST00000424339 LOC107984640A0A0U1RRK4 108 aa4.54□□□□□ -1.68
EPHA4-206ENST00000424339 C16orf90A8MZG2 172 aa4.54□□□□□ -1.68
EPHA4-206ENST00000424339 TLX1NBP0CAT3 122 aa4.54□□□□□ -1.68
EPHA4-206ENST00000424339 PSMB2P49721 201 aa4.54□□□□□ -1.68
EPHA4-206ENST00000424339 COX17Q14061 63 aa4.54□□□□□ -1.68
EPHA4-206ENST00000424339 LCE1AQ5T7P2 110 aa4.54□□□□□ -1.68
EPHA4-206ENST00000424339 ARL17AQ8IVW1 177 aa4.54□□□□□ -1.68
EPHA4-206ENST00000424339 MTURNQ8N3F0 131 aa4.54□□□□□ -1.68
EPHA4-206ENST00000424339 NDUFC2-KCTD14E9PQ53 114 aa4.53□□□□□ -1.68
EPHA4-206ENST00000424339 SCGB1A1P11684 91 aa4.53□□□□□ -1.68
EPHA4-206ENST00000424339 IFITM1P13164 125 aa4.53□□□□□ -1.68
EPHA4-206ENST00000424339 ADAMTSL4-AS1Q5T5F5 129 aa4.53□□□□□ -1.68
EPHA4-206ENST00000424339 Q6ZRU5 148 aa4.53□□□□□ -1.68
EPHA4-206ENST00000424339 TEN1Q86WV5 123 aa4.53□□□□□ -1.68
EPHA4-206ENST00000424339 PPDPFLQ8WWR9 84 aa4.53□□□□□ -1.68
EPHA4-206ENST00000424339 ZNF625Q96I27 306 aaPredicted RBP4.53□□□□□ -1.68
EPHA4-206ENST00000424339 ERG28Q9UKR5 140 aa4.53□□□□□ -1.68
EPHA4-206ENST00000424339 DNAH17Q9UFH2 4485 aa4.52□□□□□ -1.69
EPHA4-206ENST00000424339 FRAS1Q86XX4 4008 aa4.52□□□□□ -1.69
EPHA4-206ENST00000424339 C2orf82Q6UX34 121 aa4.52□□□□□ -1.69
EPHA4-206ENST00000424339 UNQ6190/PRO20217Q6UXQ8 127 aa4.52□□□□□ -1.69
EPHA4-206ENST00000424339 SDIM1Q6ZPB5 146 aa4.52□□□□□ -1.69
EPHA4-206ENST00000424339 LINC00526Q96FQ7 95 aa4.52□□□□□ -1.69
EPHA4-206ENST00000424339 PPDPFQ9H3Y8 114 aa4.52□□□□□ -1.69
EPHA4-206ENST00000424339 C6orf48Q9UBA6 75 aa4.52□□□□□ -1.69
EPHA4-206ENST00000424339 KRTAP10-6P60371 365 aaPredicted RBP4.51□□□□□ -1.69
EPHA4-206ENST00000424339 CIRBPQ14011 172 aaKnown RBP4.51□□□□□ -1.69
EPHA4-206ENST00000424339 Q6ZSA8 131 aa4.51□□□□□ -1.69
EPHA4-206ENST00000424339 SIGMAR1Q99720 223 aa4.51□□□□□ -1.69
EPHA4-206ENST00000424339 DNAH2Q9P225 4427 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms