RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 LAMTOR3Q9UHA4 124 aa10.26□□□□□ -0.77
C9orf3-204ENST00000424143 A0A096LPF7 62 aa10.25□□□□□ -0.77
C9orf3-204ENST00000424143 TRBV7-4A0A0J9YYF1 115 aa10.25□□□□□ -0.77
C9orf3-204ENST00000424143 Q6ZVQ6 151 aa10.25□□□□□ -0.77
C9orf3-204ENST00000424143 DIRC1Q969H9 104 aa10.25□□□□□ -0.77
C9orf3-204ENST00000424143 IGLV10-54A0A075B6I4 117 aa10.25□□□□□ -0.77
C9orf3-204ENST00000424143 EPM2AB3EWF7 344 aa10.25□□□□□ -0.77
C9orf3-204ENST00000424143 KRTAP10-3P60369 221 aa10.25□□□□□ -0.77
C9orf3-204ENST00000424143 ABCA12Q86UK0 2595 aa10.24□□□□□ -0.77
C9orf3-204ENST00000424143 KLKP1Q107X0 134 aa10.24□□□□□ -0.77
C9orf3-204ENST00000424143 F8WDY8 70 aa10.23□□□□□ -0.77
C9orf3-204ENST00000424143 Q8NAQ8 132 aa10.23□□□□□ -0.77
C9orf3-204ENST00000424143 SPART-AS1P0CW21 52 aa10.22□□□□□ -0.77
C9orf3-204ENST00000424143 COX7BP24311 80 aa10.22□□□□□ -0.77
C9orf3-204ENST00000424143 ELOF1P60002 83 aaKnown RBP10.22□□□□□ -0.77
C9orf3-204ENST00000424143 Q6ZQY7 126 aa10.22□□□□□ -0.77
C9orf3-204ENST00000424143 WFDC9Q8NEX5 89 aa10.22□□□□□ -0.77
C9orf3-204ENST00000424143 WIPF1O43516 503 aa10.21□□□□□ -0.78
C9orf3-204ENST00000424143 Q8N3U1 123 aa10.21□□□□□ -0.78
C9orf3-204ENST00000424143 SPATA3Q8NHX4 192 aa10.21□□□□□ -0.78
C9orf3-204ENST00000424143 C6orf48Q9UBA6 75 aa10.21□□□□□ -0.78
C9orf3-204ENST00000424143 SONP18583 2426 aaKnown RBP10.21□□□□□ -0.78
C9orf3-204ENST00000424143 H3BNG1 76 aa10.2□□□□□ -0.78
C9orf3-204ENST00000424143 ZNF73O43830 326 aaPredicted RBP10.2□□□□□ -0.78
C9orf3-204ENST00000424143 APCP25054 2843 aa10.2□□□□□ -0.78
C9orf3-204ENST00000424143 NDUFC1O43677 76 aa10.19□□□□□ -0.78
C9orf3-204ENST00000424143 EGFEM1PQ0D2K5 195 aa10.19□□□□□ -0.78
C9orf3-204ENST00000424143 CENPEQ02224 2701 aa10.19□□□□□ -0.78
C9orf3-204ENST00000424143 FAM236DA0A1B0GTK5 79 aa10.18□□□□□ -0.78
C9orf3-204ENST00000424143 M0R378 163 aa10.18□□□□□ -0.78
C9orf3-204ENST00000424143 OXTP01178 125 aa10.18□□□□□ -0.78
C9orf3-204ENST00000424143 FAM236CP0DP71 79 aa10.18□□□□□ -0.78
C9orf3-204ENST00000424143 DEFB135Q30KP9 77 aa10.18□□□□□ -0.78
C9orf3-204ENST00000424143 C20orf197Q8N268 126 aa10.18□□□□□ -0.78
C9orf3-204ENST00000424143 SERP1Q9Y6X1 66 aa10.18□□□□□ -0.78
C9orf3-204ENST00000424143 H7BZZ5 65 aa10.18□□□□□ -0.78
C9orf3-204ENST00000424143 ERC2-IT1O76042 136 aa10.18□□□□□ -0.78
C9orf3-204ENST00000424143 CELA1Q9UNI1 258 aa10.18□□□□□ -0.78
C9orf3-204ENST00000424143 VPREB1P12018 145 aa10.17□□□□□ -0.78
C9orf3-204ENST00000424143 HAMPP81172 84 aa10.17□□□□□ -0.78
C9orf3-204ENST00000424143 KLK12Q9UKR0 248 aa10.17□□□□□ -0.78
C9orf3-204ENST00000424143 CSMD2Q7Z408 3487 aa10.17□□□□□ -0.78
C9orf3-204ENST00000424143 M0R2N4 97 aa10.16□□□□□ -0.78
C9orf3-204ENST00000424143 ATP5EP56381 51 aaPredicted RBP10.15□□□□□ -0.78
C9orf3-204ENST00000424143 ANK3Q12955 4377 aaKnown RBP10.15□□□□□ -0.78
C9orf3-204ENST00000424143 A0A1B0GW54 56 aa10.15□□□□□ -0.79
C9orf3-204ENST00000424143 FLNAP21333 2647 aaKnown RBP10.14□□□□□ -0.79
C9orf3-204ENST00000424143 Q5XG85 94 aa10.14□□□□□ -0.79
C9orf3-204ENST00000424143 KRTAP26-1Q6PEX3 210 aa10.14□□□□□ -0.79
C9orf3-204ENST00000424143 LINC00528Q8N1L1 170 aa10.14□□□□□ -0.79
C9orf3-204ENST00000424143 NF1P21359 2839 aa10.12□□□□□ -0.79
C9orf3-204ENST00000424143 TRAV10A0A0B4J240 114 aa10.11□□□□□ -0.79
C9orf3-204ENST00000424143 FN1P02751 2386 aaKnown RBP10.11□□□□□ -0.79
C9orf3-204ENST00000424143 NBPF19A0A087WUL8 3843 aa10.11□□□□□ -0.79
C9orf3-204ENST00000424143 DEFB4AO15263 64 aa10.11□□□□□ -0.79
C9orf3-204ENST00000424143 ZFYVE26Q68DK2 2539 aa10.1□□□□□ -0.79
C9orf3-204ENST00000424143 J3QKU1 62 aa10.1□□□□□ -0.79
C9orf3-204ENST00000424143 CAMK2N2Q96S95 79 aa10.1□□□□□ -0.79
C9orf3-204ENST00000424143 XAGE1AQ9HD64 81 aa10.09□□□□□ -0.79
C9orf3-204ENST00000424143 ZNF469Q96JG9 3925 aaPredicted RBP10.08□□□□□ -0.8
C9orf3-204ENST00000424143 CCDC168Q8NDH2 2452 aa10.07□□□□□ -0.8
C9orf3-204ENST00000424143 KCNQ1DNQ9H478 68 aa10.05□□□□□ -0.8
C9orf3-204ENST00000424143 PLA2G2DQ9UNK4 145 aa10.05□□□□□ -0.8
C9orf3-204ENST00000424143 SMIM26A0A096LP01 95 aa10.04□□□□□ -0.8
C9orf3-204ENST00000424143 HTN3P15516 51 aa10.04□□□□□ -0.8
C9orf3-204ENST00000424143 C15orf56Q8N910 161 aa10.04□□□□□ -0.8
C9orf3-204ENST00000424143 PDZD2O15018 2839 aa10.04□□□□□ -0.8
C9orf3-204ENST00000424143 SETD2Q9BYW2 2564 aaPredicted RBP10.04□□□□□ -0.8
C9orf3-204ENST00000424143 Q6ZRU5 148 aa10.04□□□□□ -0.8
C9orf3-204ENST00000424143 IGLV5-48A0A075B6I7 105 aa10.03□□□□□ -0.8
C9orf3-204ENST00000424143 NREPQ16612 68 aa10.03□□□□□ -0.8
C9orf3-204ENST00000424143 C4orf26Q17RF5 130 aa10.03□□□□□ -0.8
C9orf3-204ENST00000424143 NIPBLQ6KC79 2804 aaeCLIP10.03□□□□□ -0.8
C9orf3-204ENST00000424143 BPY2O14599 106 aa10.02□□□□□ -0.81
C9orf3-204ENST00000424143 IGKV4-1P06312 121 aa10.01□□□□□ -0.81
C9orf3-204ENST00000424143 TLX1NBP0CAT3 122 aa10.01□□□□□ -0.81
C9orf3-204ENST00000424143 RMI2Q96E14 147 aa10.01□□□□□ -0.81
C9orf3-204ENST00000424143 TM2D3Q9BRN9 247 aa10.01□□□□□ -0.81
C9orf3-204ENST00000424143 F8WEM9 126 aa10□□□□□ -0.81
C9orf3-204ENST00000424143 KPRPQ5T749 579 aaPredicted RBP10□□□□□ -0.81
C9orf3-204ENST00000424143 HIGD2BQ4VC39 106 aa10□□□□□ -0.81
C9orf3-204ENST00000424143 LINC01556Q5JQF7 62 aa10□□□□□ -0.81
C9orf3-204ENST00000424143 OCR1Q9BZK8 76 aa10□□□□□ -0.81
C9orf3-204ENST00000424143 IGLV5-37A0A075B6J1 123 aa9.99□□□□□ -0.81
C9orf3-204ENST00000424143 WFDC10BQ8IUB3 73 aa9.99□□□□□ -0.81
C9orf3-204ENST00000424143 DHRS4-AS1Q9P1J3 65 aa9.99□□□□□ -0.81
C9orf3-204ENST00000424143 GCN1Q92616 2671 aaKnown RBP9.98□□□□□ -0.81
C9orf3-204ENST00000424143 TMEM254Q8TBM7 123 aa9.98□□□□□ -0.81
C9orf3-204ENST00000424143 SNURFQ9Y675 71 aa9.98□□□□□ -0.81
C9orf3-204ENST00000424143 MTORP42345 2549 aa9.98□□□□□ -0.81
C9orf3-204ENST00000424143 SYCNQ0VAF6 134 aa9.97□□□□□ -0.81
C9orf3-204ENST00000424143 MRAPQ8TCY5 172 aa9.97□□□□□ -0.81
C9orf3-204ENST00000424143 C1orf43Q9BWL3 253 aa9.97□□□□□ -0.81
C9orf3-204ENST00000424143 ACANP16112 2415 aa9.97□□□□□ -0.81
C9orf3-204ENST00000424143 HRCT1Q6UXD1 115 aa9.96□□□□□ -0.81
C9orf3-204ENST00000424143 Q6ZRP5 223 aa9.96□□□□□ -0.81
C9orf3-204ENST00000424143 HIVEP2P31629 2446 aa9.96□□□□□ -0.81
C9orf3-204ENST00000424143 A0A0U1RQV1 116 aa9.96□□□□□ -0.82
C9orf3-204ENST00000424143 Q8N377 158 aa9.96□□□□□ -0.82
C9orf3-204ENST00000424143 PRYO14603 147 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms