RNA–Protein interactions for RNA: ENST00000424059.1

PMS1-209, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 2,004 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-209ENST00000424059 A0A1B0GU33 70 aa1.7□□□□□ -2.14
PMS1-209ENST00000424059 NDUFA1O15239 70 aa1.7□□□□□ -2.14
PMS1-209ENST00000424059 MGPP08493 103 aa1.7□□□□□ -2.14
PMS1-209ENST00000424059 LINC00472Q9H8W2 130 aa1.7□□□□□ -2.14
PMS1-209ENST00000424059 PRR14LQ5THK1 2151 aa1.7□□□□□ -2.14
PMS1-209ENST00000424059 COL4A4P53420 1690 aaPredicted RBP1.7□□□□□ -2.14
PMS1-209ENST00000424059 TRBV6-4A0A1B0GX49 114 aa1.69□□□□□ -2.14
PMS1-209ENST00000424059 M0R2N4 97 aa1.69□□□□□ -2.14
PMS1-209ENST00000424059 SPINK9Q5DT21 86 aa1.69□□□□□ -2.14
PMS1-209ENST00000424059 SMIM11BQ8TCY0 68 aa1.69□□□□□ -2.14
PMS1-209ENST00000424059 COL4A5P29400 1685 aa1.69□□□□□ -2.14
PMS1-209ENST00000424059 SHANK1Q9Y566 2161 aa1.69□□□□□ -2.14
PMS1-209ENST00000424059 PRB2P02812 416 aaPredicted RBP1.69□□□□□ -2.14
PMS1-209ENST00000424059 PRB1P04280 392 aa1.69□□□□□ -2.14
PMS1-209ENST00000424059 PIGYQ3MUY2 71 aa1.69□□□□□ -2.14
PMS1-209ENST00000424059 ST20-AS1Q8NBB2 130 aa1.69□□□□□ -2.14
PMS1-209ENST00000424059 PRRC2BQ5JSZ5 2229 aaKnown RBP1.68□□□□□ -2.14
PMS1-209ENST00000424059 Q8N9L7 120 aa1.68□□□□□ -2.14
PMS1-209ENST00000424059 C16orf74Q96GX8 76 aa1.68□□□□□ -2.14
PMS1-209ENST00000424059 RNF5Q99942 180 aa1.68□□□□□ -2.14
PMS1-209ENST00000424059 ZNF318Q5VUA4 2279 aa1.68□□□□□ -2.14
PMS1-209ENST00000424059 TNCP24821 2201 aa1.67□□□□□ -2.14
PMS1-209ENST00000424059 COL4A2P08572 1712 aa1.67□□□□□ -2.14
PMS1-209ENST00000424059 BPTFQ12830 3046 aa1.67□□□□□ -2.14
PMS1-209ENST00000424059 IGKV2-28A0A075B6P5 120 aa1.67□□□□□ -2.14
PMS1-209ENST00000424059 IGKV2D-28P01615 120 aa1.67□□□□□ -2.14
PMS1-209ENST00000424059 POLR2KP53803 58 aaKnown RBP1.67□□□□□ -2.14
PMS1-209ENST00000424059 SDK1Q7Z5N4 2213 aa1.67□□□□□ -2.14
PMS1-209ENST00000424059 IGLV7-43P04211 117 aa1.66□□□□□ -2.14
PMS1-209ENST00000424059 COX7BP24311 80 aa1.66□□□□□ -2.14
PMS1-209ENST00000424059 SPINT4Q6UDR6 99 aa1.66□□□□□ -2.14
PMS1-209ENST00000424059 CACNA1DQ01668 2161 aa1.66□□□□□ -2.14
PMS1-209ENST00000424059 NBDYA0A0U1RRE5 68 aa1.66□□□□□ -2.14
PMS1-209ENST00000424059 LINC00158P58513 81 aa1.66□□□□□ -2.14
PMS1-209ENST00000424059 KRTAP10-1P60331 282 aa1.66□□□□□ -2.14
PMS1-209ENST00000424059 PATE1Q8WXA2 126 aa1.66□□□□□ -2.14
PMS1-209ENST00000424059 ALPK2Q86TB3 2170 aa1.65□□□□□ -2.14
PMS1-209ENST00000424059 LINC00315P59091 139 aa1.65□□□□□ -2.15
PMS1-209ENST00000424059 RPL39P62891 51 aaKnown RBP1.65□□□□□ -2.15
PMS1-209ENST00000424059 DEFB132Q7Z7B7 95 aa1.65□□□□□ -2.15
PMS1-209ENST00000424059 RPL39LQ96EH5 51 aaKnown RBP1.65□□□□□ -2.15
PMS1-209ENST00000424059 Q96NJ1 140 aa1.65□□□□□ -2.15
PMS1-209ENST00000424059 ANAPC11Q9NYG5 84 aa1.65□□□□□ -2.15
PMS1-209ENST00000424059 ABCA4P78363 2273 aa1.65□□□□□ -2.15
PMS1-209ENST00000424059 PRCDQ00LT1 54 aa1.64□□□□□ -2.15
PMS1-209ENST00000424059 A0A096LNT2 108 aa1.64□□□□□ -2.15
PMS1-209ENST00000424059 TRGV1A0A0A0MS02 117 aa1.64□□□□□ -2.15
PMS1-209ENST00000424059 A0A1B0GU69 56 aa1.64□□□□□ -2.15
PMS1-209ENST00000424059 PRB3Q04118 309 aaPredicted RBP1.64□□□□□ -2.15
PMS1-209ENST00000424059 IGKV2-40A0A087WW87 121 aaPredicted RBP1.63□□□□□ -2.15
PMS1-209ENST00000424059 IGKV2D-40P01614 121 aaPredicted RBP1.63□□□□□ -2.15
PMS1-209ENST00000424059 HRES1P13985 223 aa1.63□□□□□ -2.15
PMS1-209ENST00000424059 PRO2289Q9P1D8 64 aa1.63□□□□□ -2.15
PMS1-209ENST00000424059 DEFB131BA0A096LNP1 70 aa1.62□□□□□ -2.15
PMS1-209ENST00000424059 LINC00575Q6W349 94 aa1.62□□□□□ -2.15
PMS1-209ENST00000424059 Q6ZQY7 126 aa1.62□□□□□ -2.15
PMS1-209ENST00000424059 LINC00304Q8N9R0 145 aa1.62□□□□□ -2.15
PMS1-209ENST00000424059 SEC16AO15027 2179 aa1.62□□□□□ -2.15
PMS1-209ENST00000424059 KNTC1P50748 2209 aa1.62□□□□□ -2.15
PMS1-209ENST00000424059 DEFB116Q30KQ4 102 aa1.62□□□□□ -2.15
PMS1-209ENST00000424059 C5orf56Q8N8D9 126 aa1.62□□□□□ -2.15
PMS1-209ENST00000424059 PRO3102Q9H379 93 aa1.62□□□□□ -2.15
PMS1-209ENST00000424059 IGKV2D-24A0A075B6R9 120 aa1.61□□□□□ -2.15
PMS1-209ENST00000424059 FAM168BA1KXE4 195 aa1.61□□□□□ -2.15
PMS1-209ENST00000424059 COX17Q14061 63 aa1.61□□□□□ -2.15
PMS1-209ENST00000424059 Q8IZM0 81 aa1.61□□□□□ -2.15
PMS1-209ENST00000424059 LEAP2Q969E1 77 aa1.61□□□□□ -2.15
PMS1-209ENST00000424059 CDKN2A-AS1Q9UH64 79 aa1.61□□□□□ -2.15
PMS1-209ENST00000424059 A0A1W2PNN7 141 aa1.61□□□□□ -2.15
PMS1-209ENST00000424059 H3BRN7 92 aa1.61□□□□□ -2.15
PMS1-209ENST00000424059 KRTAP11-1Q8IUC1 163 aa1.61□□□□□ -2.15
PMS1-209ENST00000424059 CACNA1CQ13936 2221 aa1.6□□□□□ -2.15
PMS1-209ENST00000424059 I3L2K1 104 aa1.6□□□□□ -2.15
PMS1-209ENST00000424059 C4orf3Q8WVX3 66 aa1.6□□□□□ -2.15
PMS1-209ENST00000424059 F5P12259 2224 aa1.6□□□□□ -2.15
PMS1-209ENST00000424059 UNC13CQ8NB66 2214 aa1.6□□□□□ -2.15
PMS1-209ENST00000424059 RP1P56715 2156 aa1.6□□□□□ -2.15
PMS1-209ENST00000424059 CUL9Q8IWT3 2517 aa1.6□□□□□ -2.15
PMS1-209ENST00000424059 RPL37AP61513 92 aaKnown RBP1.59□□□□□ -2.15
PMS1-209ENST00000424059 TYMSOSQ8TAI1 123 aa1.59□□□□□ -2.15
PMS1-209ENST00000424059 CCL19Q99731 98 aa1.59□□□□□ -2.15
PMS1-209ENST00000424059 R4GN34 69 aa1.59□□□□□ -2.15
PMS1-209ENST00000424059 CADP27708 2225 aa1.59□□□□□ -2.15
PMS1-209ENST00000424059 A0A0G2JQZ4 141 aa1.59□□□□□ -2.16
PMS1-209ENST00000424059 IGLV6-57P01721 117 aa1.59□□□□□ -2.16
PMS1-209ENST00000424059 TPRXLQ17RH7 258 aa1.59□□□□□ -2.16
PMS1-209ENST00000424059 PSORS1C2Q9UIG4 136 aa1.59□□□□□ -2.16
PMS1-209ENST00000424059 COL27A1Q8IZC6 1860 aaPredicted RBP1.58□□□□□ -2.16
PMS1-209ENST00000424059 SPAG17Q6Q759 2223 aa1.58□□□□□ -2.16
PMS1-209ENST00000424059 MRPL33O75394 65 aaKnown RBP1.58□□□□□ -2.16
PMS1-209ENST00000424059 ALMS1Q8TCU4 4167 aa1.57□□□□□ -2.16
PMS1-209ENST00000424059 SPACA4Q8TDM5 124 aa1.57□□□□□ -2.16
PMS1-209ENST00000424059 COX6A2Q02221 97 aa1.57□□□□□ -2.16
PMS1-209ENST00000424059 CCL26Q9Y258 94 aa1.57□□□□□ -2.16
PMS1-209ENST00000424059 MED13LQ71F56 2210 aa1.57□□□□□ -2.16
PMS1-209ENST00000424059 PKD1L2Q7Z442 2459 aa1.56□□□□□ -2.16
PMS1-209ENST00000424059 K7EQZ3 153 aa1.56□□□□□ -2.16
PMS1-209ENST00000424059 M0QY20 66 aa1.56□□□□□ -2.16
PMS1-209ENST00000424059 ACYP2P14621 99 aa1.56□□□□□ -2.16
PMS1-209ENST00000424059 WT1-ASQ06250 92 aa1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms