RNA–Protein interactions for RNA: ENST00000422344.5

TRAF4-204, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-204ENST00000422344 IGKV2-28A0A075B6P5 120 aa13.17□□□□□ -0.3
TRAF4-204ENST00000422344 A0A0U1RRA0 63 aa13.17□□□□□ -0.3
TRAF4-204ENST00000422344 SCO1O75880 301 aa13.17□□□□□ -0.3
TRAF4-204ENST00000422344 IGKV2D-28P01615 120 aa13.17□□□□□ -0.3
TRAF4-204ENST00000422344 KRTAP1-4P0C5Y4 121 aa13.17□□□□□ -0.3
TRAF4-204ENST00000422344 PLNP26678 52 aa13.16□□□□□ -0.3
TRAF4-204ENST00000422344 MEIG1Q5JSS6 88 aa13.16□□□□□ -0.3
TRAF4-204ENST00000422344 UBE2AP49459 152 aa13.15□□□□□ -0.3
TRAF4-204ENST00000422344 HERV-K104P63124 156 aa13.15□□□□□ -0.3
TRAF4-204ENST00000422344 RPL13AP40429 203 aaKnown RBP13.14□□□□□ -0.31
TRAF4-204ENST00000422344 NDUFA12Q9UI09 145 aa13.14□□□□□ -0.31
TRAF4-204ENST00000422344 MYMXA0A1B0GTQ4 84 aa13.12□□□□□ -0.31
TRAF4-204ENST00000422344 LINC00587B1AMM8 73 aa13.12□□□□□ -0.31
TRAF4-204ENST00000422344 DPM2O94777 84 aa13.12□□□□□ -0.31
TRAF4-204ENST00000422344 SMIM13P0DJ93 91 aa13.12□□□□□ -0.31
TRAF4-204ENST00000422344 HERVK_113P61574 105 aa13.11□□□□□ -0.31
TRAF4-204ENST00000422344 MAP1LC3CQ9BXW4 147 aa13.11□□□□□ -0.31
TRAF4-204ENST00000422344 LEPROTO15243 131 aa13.1□□□□□ -0.31
TRAF4-204ENST00000422344 PLEKHB2Q96CS7 222 aa13.1□□□□□ -0.31
TRAF4-204ENST00000422344 PMCHL2Q9BQD1 86 aa13.1□□□□□ -0.31
TRAF4-204ENST00000422344 Q8NDZ9 215 aa13.09□□□□□ -0.31
TRAF4-204ENST00000422344 IGKCP01834 107 aa13.08□□□□□ -0.32
TRAF4-204ENST00000422344 MIR7-3HGQ8N6C7 128 aa13.08□□□□□ -0.32
TRAF4-204ENST00000422344 TMEM126AQ9H061 195 aa13.08□□□□□ -0.32
TRAF4-204ENST00000422344 TMEM238C9JI98 176 aa13.07□□□□□ -0.32
TRAF4-204ENST00000422344 HIST1H2BKO60814 126 aa13.07□□□□□ -0.32
TRAF4-204ENST00000422344 HIST1H2BJP06899 126 aa13.07□□□□□ -0.32
TRAF4-204ENST00000422344 HIST1H2BOP23527 126 aa13.07□□□□□ -0.32
TRAF4-204ENST00000422344 HIST1H2BBP33778 126 aa13.07□□□□□ -0.32
TRAF4-204ENST00000422344 HIST1H2BDP58876 126 aa13.07□□□□□ -0.32
TRAF4-204ENST00000422344 HIST1H2BCP62807 126 aa13.07□□□□□ -0.32
TRAF4-204ENST00000422344 HIST2H2BEQ16778 126 aa13.07□□□□□ -0.32
TRAF4-204ENST00000422344 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.07□□□□□ -0.32
TRAF4-204ENST00000422344 FAM19A1Q7Z5A9 133 aa13.07□□□□□ -0.32
TRAF4-204ENST00000422344 BOD1L2Q8IYS8 172 aa13.07□□□□□ -0.32
TRAF4-204ENST00000422344 HIST1H2BHQ93079 126 aa13.07□□□□□ -0.32
TRAF4-204ENST00000422344 HIST1H2BNQ99877 126 aa13.07□□□□□ -0.32
TRAF4-204ENST00000422344 HIST1H2BMQ99879 126 aa13.07□□□□□ -0.32
TRAF4-204ENST00000422344 KRTAP13-1Q8IUC0 172 aa13.06□□□□□ -0.32
TRAF4-204ENST00000422344 J3QQQ9 107 aa13.05□□□□□ -0.32
TRAF4-204ENST00000422344 M0R378 163 aa13.05□□□□□ -0.32
TRAF4-204ENST00000422344 LGALS3P17931 250 aaKnown RBP13.05□□□□□ -0.32
TRAF4-204ENST00000422344 TSPEAR-AS2P59090 65 aa13.05□□□□□ -0.32
TRAF4-204ENST00000422344 PRLHP81277 87 aa13.05□□□□□ -0.32
TRAF4-204ENST00000422344 LPAP08519 4548 aa13.02□□□□□ -0.32
TRAF4-204ENST00000422344 CRYGAP11844 174 aa13.02□□□□□ -0.33
TRAF4-204ENST00000422344 NMUP48645 174 aa13.02□□□□□ -0.33
TRAF4-204ENST00000422344 SYS1-DBNDD2H3BUS1 97 aa13□□□□□ -0.33
TRAF4-204ENST00000422344 NCR3O14931 201 aa13□□□□□ -0.33
TRAF4-204ENST00000422344 A0A087X002 238 aa12.98□□□□□ -0.33
TRAF4-204ENST00000422344 IGKV2D-26A0A0A0MRZ7 120 aa12.98□□□□□ -0.33
TRAF4-204ENST00000422344 DAND5Q8N907 189 aa12.97□□□□□ -0.33
TRAF4-204ENST00000422344 TYMSOSQ8TAI1 123 aa12.97□□□□□ -0.33
TRAF4-204ENST00000422344 MIEN1Q9BRT3 115 aa12.97□□□□□ -0.33
TRAF4-204ENST00000422344 PRYO14603 147 aa12.96□□□□□ -0.33
TRAF4-204ENST00000422344 S100A12P80511 92 aa12.96□□□□□ -0.33
TRAF4-204ENST00000422344 ANAPC11Q9NYG5 84 aa12.96□□□□□ -0.33
TRAF4-204ENST00000422344 E9PLD3 99 aa12.95□□□□□ -0.34
TRAF4-204ENST00000422344 HIGD2AQ9BW72 106 aa12.95□□□□□ -0.34
TRAF4-204ENST00000422344 FAM229BQ4G0N7 80 aa12.94□□□□□ -0.34
TRAF4-204ENST00000422344 PET117Q6UWS5 81 aa12.93□□□□□ -0.34
TRAF4-204ENST00000422344 LOC107984156A0A0G2JMH3 177 aa12.91□□□□□ -0.34
TRAF4-204ENST00000422344 TRBV10-3A0A0K0K1G6 114 aa12.91□□□□□ -0.34
TRAF4-204ENST00000422344 LINC01545Q5VT33 79 aa12.91□□□□□ -0.34
TRAF4-204ENST00000422344 ARL17AQ8IVW1 177 aa12.91□□□□□ -0.34
TRAF4-204ENST00000422344 KCNQ1DNQ9H478 68 aa12.91□□□□□ -0.34
TRAF4-204ENST00000422344 ETDCA0A1B0GVM5 59 aa12.9□□□□□ -0.34
TRAF4-204ENST00000422344 A0A0J9YXY3 114 aa12.89□□□□□ -0.35
TRAF4-204ENST00000422344 TSPAN13O95857 204 aa12.89□□□□□ -0.35
TRAF4-204ENST00000422344 COA6Q5JTJ3 125 aaKnown RBP12.89□□□□□ -0.35
TRAF4-204ENST00000422344 LINC00337Q8N6G1 96 aa12.89□□□□□ -0.35
TRAF4-204ENST00000422344 TRBV10-2A0A0K0K1G8 114 aa12.88□□□□□ -0.35
TRAF4-204ENST00000422344 SPANXB1Q9NS25 103 aaPredicted RBP12.88□□□□□ -0.35
TRAF4-204ENST00000422344 C3orf79P0CE67 100 aa12.87□□□□□ -0.35
TRAF4-204ENST00000422344 DDTP30046 118 aa12.87□□□□□ -0.35
TRAF4-204ENST00000422344 KRTDAPP60985 99 aa12.87□□□□□ -0.35
TRAF4-204ENST00000422344 KRTAP13-2Q52LG2 175 aa12.87□□□□□ -0.35
TRAF4-204ENST00000422344 ZNF706Q9Y5V0 76 aaPredicted RBP12.87□□□□□ -0.35
TRAF4-204ENST00000422344 SPRR1AP35321 89 aa12.86□□□□□ -0.35
TRAF4-204ENST00000422344 NPC2P61916 151 aa12.86□□□□□ -0.35
TRAF4-204ENST00000422344 PRR4Q16378 134 aa12.86□□□□□ -0.35
TRAF4-204ENST00000422344 NDUFC2O95298 119 aa12.85□□□□□ -0.35
TRAF4-204ENST00000422344 S100A7L2Q5SY68 101 aa12.85□□□□□ -0.35
TRAF4-204ENST00000422344 C20orf202A1L168 122 aa12.83□□□□□ -0.36
TRAF4-204ENST00000422344 ADAMTSL4-AS1Q5T5F5 129 aa12.83□□□□□ -0.36
TRAF4-204ENST00000422344 SPRR4Q96PI1 79 aa12.83□□□□□ -0.36
TRAF4-204ENST00000422344 LINC00304Q8N9R0 145 aa12.82□□□□□ -0.36
TRAF4-204ENST00000422344 ZNF815PA8K554 130 aa12.81□□□□□ -0.36
TRAF4-204ENST00000422344 KRTAP4-16G5E9R7 235 aaPredicted RBP12.81□□□□□ -0.36
TRAF4-204ENST00000422344 SMCR5Q8TEV8 140 aa12.81□□□□□ -0.36
TRAF4-204ENST00000422344 SOSTDC1Q6X4U4 206 aa12.8□□□□□ -0.36
TRAF4-204ENST00000422344 TIMM17BO60830 172 aa12.79□□□□□ -0.36
TRAF4-204ENST00000422344 B5MCH6 92 aa12.78□□□□□ -0.36
TRAF4-204ENST00000422344 IGLV6-57P01721 117 aa12.78□□□□□ -0.36
TRAF4-204ENST00000422344 MUC2Q02817 5179 aa12.77□□□□□ -0.37
TRAF4-204ENST00000422344 TRAV23DV6A0A075B6W5 121 aa12.76□□□□□ -0.37
TRAF4-204ENST00000422344 EIF4EBP3O60516 100 aaPredicted RBP12.76□□□□□ -0.37
TRAF4-204ENST00000422344 S100A1P23297 94 aa12.76□□□□□ -0.37
TRAF4-204ENST00000422344 C3orf22Q8N5N4 141 aa12.76□□□□□ -0.37
TRAF4-204ENST00000422344 LINC00308Q8TCZ7 52 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms