RNA–Protein interactions for RNA: ENST00000421625.6

USP48-205, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-205ENST00000421625 COX17Q14061 63 aa14.53□□□□□ -0.08
USP48-205ENST00000421625 RBM3P98179 157 aaKnown RBP14.52□□□□□ -0.09
USP48-205ENST00000421625 SPATA3Q8NHX4 192 aa14.52□□□□□ -0.09
USP48-205ENST00000421625 CHCHD10Q8WYQ3 142 aaPredicted RBP14.52□□□□□ -0.09
USP48-205ENST00000421625 ANK3Q12955 4377 aaKnown RBP14.52□□□□□ -0.09
USP48-205ENST00000421625 OTOGQ6ZRI0 2925 aa14.51□□□□□ -0.09
USP48-205ENST00000421625 CD164L2Q6UWJ8 174 aa14.51□□□□□ -0.09
USP48-205ENST00000421625 LAMTOR3Q9UHA4 124 aa14.5□□□□□ -0.09
USP48-205ENST00000421625 NDUFC2-KCTD14E9PQ53 114 aa14.49□□□□□ -0.09
USP48-205ENST00000421625 IGHV4-28A0A0C4DH34 117 aa14.48□□□□□ -0.09
USP48-205ENST00000421625 ZNF561-AS1K7EIQ3 104 aa14.48□□□□□ -0.09
USP48-205ENST00000421625 LINC00612Q8N6U2 182 aa14.48□□□□□ -0.09
USP48-205ENST00000421625 LINC01547P58512 204 aaPredicted RBP14.47□□□□□ -0.09
USP48-205ENST00000421625 C10orf25Q5T742 122 aa14.47□□□□□ -0.09
USP48-205ENST00000421625 ANGP03950 147 aaKnown RBP14.47□□□□□ -0.09
USP48-205ENST00000421625 HAMPP81172 84 aa14.47□□□□□ -0.09
USP48-205ENST00000421625 C6orf223Q8N319 242 aa14.47□□□□□ -0.09
USP48-205ENST00000421625 LINC01006Q8NI28 216 aa14.46□□□□□ -0.09
USP48-205ENST00000421625 PRO0255Q9UI72 69 aa14.46□□□□□ -0.09
USP48-205ENST00000421625 LOC110117498A0A087WWA1 95 aa14.46□□□□□ -0.1
USP48-205ENST00000421625 FAM236DA0A1B0GTK5 79 aa14.45□□□□□ -0.1
USP48-205ENST00000421625 FAM236CP0DP71 79 aa14.45□□□□□ -0.1
USP48-205ENST00000421625 REG3AQ06141 175 aa14.45□□□□□ -0.1
USP48-205ENST00000421625 Q6ZVQ6 151 aa14.45□□□□□ -0.1
USP48-205ENST00000421625 TRAV10A0A0B4J240 114 aa14.44□□□□□ -0.1
USP48-205ENST00000421625 UNQ6190/PRO20217Q6UXQ8 127 aa14.44□□□□□ -0.1
USP48-205ENST00000421625 H7BZZ5 65 aa14.43□□□□□ -0.1
USP48-205ENST00000421625 Q6ZQY7 126 aa14.43□□□□□ -0.1
USP48-205ENST00000421625 TRAV7A0A075B6U4 112 aa14.42□□□□□ -0.1
USP48-205ENST00000421625 FLNBO75369 2602 aaKnown RBP14.42□□□□□ -0.1
USP48-205ENST00000421625 LINC00482Q8N8I6 264 aa14.42□□□□□ -0.1
USP48-205ENST00000421625 X6R8D5 127 aa14.41□□□□□ -0.1
USP48-205ENST00000421625 SNURFQ9Y675 71 aa14.39□□□□□ -0.11
USP48-205ENST00000421625 DEFB4AO15263 64 aa14.38□□□□□ -0.11
USP48-205ENST00000421625 IGLV6-57P01721 117 aa14.38□□□□□ -0.11
USP48-205ENST00000421625 SPAG11BQ08648 103 aa14.38□□□□□ -0.11
USP48-205ENST00000421625 RMI2Q96E14 147 aa14.37□□□□□ -0.11
USP48-205ENST00000421625 HIVEP1P15822 2718 aa14.36□□□□□ -0.11
USP48-205ENST00000421625 CYSRT1A8MQ03 144 aa14.36□□□□□ -0.11
USP48-205ENST00000421625 SCXQ7RTU7 201 aa14.36□□□□□ -0.11
USP48-205ENST00000421625 BCE1O60756 84 aa14.35□□□□□ -0.11
USP48-205ENST00000421625 LINC00336Q6ZUF6 198 aa14.34□□□□□ -0.11
USP48-205ENST00000421625 PKIGQ9Y2B9 76 aa14.34□□□□□ -0.11
USP48-205ENST00000421625 NSD1Q96L73 2696 aaPredicted RBP14.34□□□□□ -0.11
USP48-205ENST00000421625 MUC7Q8TAX7 377 aa14.34□□□□□ -0.11
USP48-205ENST00000421625 KLKP1Q107X0 134 aa14.33□□□□□ -0.11
USP48-205ENST00000421625 C9orf66Q5T8R8 295 aa14.33□□□□□ -0.11
USP48-205ENST00000421625 EPM2AB3EWF7 344 aa14.33□□□□□ -0.12
USP48-205ENST00000421625 C1orf43Q9BWL3 253 aa14.33□□□□□ -0.12
USP48-205ENST00000421625 SERP1Q9Y6X1 66 aa14.33□□□□□ -0.12
USP48-205ENST00000421625 CXCL6P80162 114 aa14.32□□□□□ -0.12
USP48-205ENST00000421625 VWFP04275 2813 aa14.31□□□□□ -0.12
USP48-205ENST00000421625 C16orf95Q9H693 158 aa14.31□□□□□ -0.12
USP48-205ENST00000421625 XAGE1AQ9HD64 81 aa14.31□□□□□ -0.12
USP48-205ENST00000421625 A0A0J9YWU9 116 aa14.3□□□□□ -0.12
USP48-205ENST00000421625 IGHV4-30-4P0DP06 118 aa14.3□□□□□ -0.12
USP48-205ENST00000421625 F8WEM9 126 aa14.29□□□□□ -0.12
USP48-205ENST00000421625 TM2D3Q9BRN9 247 aa14.29□□□□□ -0.12
USP48-205ENST00000421625 PDE6GP18545 87 aa14.28□□□□□ -0.12
USP48-205ENST00000421625 DIRC1Q969H9 104 aa14.28□□□□□ -0.12
USP48-205ENST00000421625 TENM1Q9UKZ4 2725 aa14.27□□□□□ -0.12
USP48-205ENST00000421625 TRBV7-4A0A0J9YYF1 115 aa14.27□□□□□ -0.13
USP48-205ENST00000421625 LYRM9A8MSI8 78 aa14.26□□□□□ -0.13
USP48-205ENST00000421625 DEFB135Q30KP9 77 aa14.25□□□□□ -0.13
USP48-205ENST00000421625 C6orf48Q9UBA6 75 aa14.25□□□□□ -0.13
USP48-205ENST00000421625 KLK12Q9UKR0 248 aa14.25□□□□□ -0.13
USP48-205ENST00000421625 ATRQ13535 2644 aa14.24□□□□□ -0.13
USP48-205ENST00000421625 ZNF73O43830 326 aaPredicted RBP14.24□□□□□ -0.13
USP48-205ENST00000421625 INAFM1C9JVW0 142 aa14.23□□□□□ -0.13
USP48-205ENST00000421625 COX7BP24311 80 aa14.23□□□□□ -0.13
USP48-205ENST00000421625 DAD1P61803 113 aa14.22□□□□□ -0.13
USP48-205ENST00000421625 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP14.22□□□□□ -0.13
USP48-205ENST00000421625 CELA1Q9UNI1 258 aa14.22□□□□□ -0.13
USP48-205ENST00000421625 H3BQ85 93 aa14.21□□□□□ -0.13
USP48-205ENST00000421625 HTN3P15516 51 aa14.2□□□□□ -0.14
USP48-205ENST00000421625 MRAPQ8TCY5 172 aa14.2□□□□□ -0.14
USP48-205ENST00000421625 ELOF1P60002 83 aaKnown RBP14.19□□□□□ -0.14
USP48-205ENST00000421625 KRTAP10-3P60369 221 aa14.19□□□□□ -0.14
USP48-205ENST00000421625 FP248Q71RG6 208 aaPredicted RBP14.19□□□□□ -0.14
USP48-205ENST00000421625 Q8N9L7 120 aa14.19□□□□□ -0.14
USP48-205ENST00000421625 GVQW2A0A096LPI5 108 aaPredicted RBP14.18□□□□□ -0.14
USP48-205ENST00000421625 PRR34Q9NV39 138 aa14.18□□□□□ -0.14
USP48-205ENST00000421625 A0A0U1RQV1 116 aa14.17□□□□□ -0.14
USP48-205ENST00000421625 NREPQ16612 68 aa14.17□□□□□ -0.14
USP48-205ENST00000421625 LELP1Q5T871 98 aa14.17□□□□□ -0.14
USP48-205ENST00000421625 F8P00451 2351 aa14.16□□□□□ -0.14
USP48-205ENST00000421625 MIFP14174 115 aa14.15□□□□□ -0.14
USP48-205ENST00000421625 PRO0628Q9UI54 55 aa14.15□□□□□ -0.14
USP48-205ENST00000421625 TRBV7-6A0A0J9YX20 115 aa14.15□□□□□ -0.14
USP48-205ENST00000421625 TEP1Q99973 2627 aaKnown RBP14.15□□□□□ -0.14
USP48-205ENST00000421625 BPY2O14599 106 aa14.14□□□□□ -0.15
USP48-205ENST00000421625 HIGD2BQ4VC39 106 aa14.14□□□□□ -0.15
USP48-205ENST00000421625 LINC00474Q9P2X8 69 aa14.14□□□□□ -0.15
USP48-205ENST00000421625 SMIM26A0A096LP01 95 aa14.13□□□□□ -0.15
USP48-205ENST00000421625 VPREB1P12018 145 aa14.13□□□□□ -0.15
USP48-205ENST00000421625 TRRAPQ9Y4A5 3859 aa14.12□□□□□ -0.15
USP48-205ENST00000421625 TMEM254Q8TBM7 123 aa14.12□□□□□ -0.15
USP48-205ENST00000421625 NDUFC1O43677 76 aa14.11□□□□□ -0.15
USP48-205ENST00000421625 IGKV4-1P06312 121 aa14.09□□□□□ -0.15
USP48-205ENST00000421625 Q8NAQ8 132 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 139.4 ms