RNA–Protein interactions for RNA: ENST00000421263.1

VARS2-202, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 460 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-202ENST00000421263 PLEKHB2Q96CS7 222 aa10.96□□□□□ -0.65
VARS2-202ENST00000421263 IGKV2D-26A0A0A0MRZ7 120 aa10.95□□□□□ -0.66
VARS2-202ENST00000421263 TMEM170BQ5T4T1 132 aa10.95□□□□□ -0.66
VARS2-202ENST00000421263 MUC17Q685J3 4493 aa10.93□□□□□ -0.66
VARS2-202ENST00000421263 FAT4Q6V0I7 4981 aa10.93□□□□□ -0.66
VARS2-202ENST00000421263 RETNLBQ9BQ08 111 aa10.92□□□□□ -0.66
VARS2-202ENST00000421263 CHTOPQ9Y3Y2 248 aaKnown RBP10.92□□□□□ -0.66
VARS2-202ENST00000421263 APOC3P02656 99 aa10.91□□□□□ -0.66
VARS2-202ENST00000421263 A0A0U1RQV1 116 aa10.9□□□□□ -0.66
VARS2-202ENST00000421263 TMEM223A0PJW6 202 aa10.9□□□□□ -0.66
VARS2-202ENST00000421263 SNAPINO95295 136 aa10.9□□□□□ -0.66
VARS2-202ENST00000421263 LINC00158P58513 81 aa10.9□□□□□ -0.66
VARS2-202ENST00000421263 CBLN2Q8IUK8 224 aa10.9□□□□□ -0.66
VARS2-202ENST00000421263 TRAV12-1A0A0B4J245 112 aa10.89□□□□□ -0.67
VARS2-202ENST00000421263 NDUFA5Q16718 116 aa10.89□□□□□ -0.67
VARS2-202ENST00000421263 SVBPQ8N300 66 aa10.89□□□□□ -0.67
VARS2-202ENST00000421263 TPRXLQ17RH7 258 aa10.88□□□□□ -0.67
VARS2-202ENST00000421263 C3orf22Q8N5N4 141 aa10.88□□□□□ -0.67
VARS2-202ENST00000421263 CHCHD1Q96BP2 118 aaKnown RBP10.87□□□□□ -0.67
VARS2-202ENST00000421263 IFI27L1Q96BM0 104 aa10.86□□□□□ -0.67
VARS2-202ENST00000421263 YPEL4Q96NS1 127 aa10.86□□□□□ -0.67
VARS2-202ENST00000421263 SPRR4Q96PI1 79 aa10.86□□□□□ -0.67
VARS2-202ENST00000421263 HIGD2AQ9BW72 106 aa10.86□□□□□ -0.67
VARS2-202ENST00000421263 IGLV7-46A0A075B6I9 117 aa10.85□□□□□ -0.67
VARS2-202ENST00000421263 A0A0U1RRA0 63 aa10.85□□□□□ -0.67
VARS2-202ENST00000421263 SMIM13P0DJ93 91 aa10.84□□□□□ -0.67
VARS2-202ENST00000421263 SPAG11AQ6PDA7 123 aa10.84□□□□□ -0.67
VARS2-202ENST00000421263 SPRR1AP35321 89 aa10.83□□□□□ -0.68
VARS2-202ENST00000421263 LCE2AQ5TA79 106 aaPredicted RBP10.83□□□□□ -0.68
VARS2-202ENST00000421263 KCNQ1DNQ9H478 68 aa10.83□□□□□ -0.68
VARS2-202ENST00000421263 CDIP1Q9H305 208 aa10.82□□□□□ -0.68
VARS2-202ENST00000421263 KRTAP4-16G5E9R7 235 aaPredicted RBP10.81□□□□□ -0.68
VARS2-202ENST00000421263 PRYO14603 147 aa10.81□□□□□ -0.68
VARS2-202ENST00000421263 HERV-K104P63124 156 aa10.81□□□□□ -0.68
VARS2-202ENST00000421263 BOD1L2Q8IYS8 172 aa10.81□□□□□ -0.68
VARS2-202ENST00000421263 LINC00337Q8N6G1 96 aa10.81□□□□□ -0.68
VARS2-202ENST00000421263 MIR7-3HGQ8N6C7 128 aa10.8□□□□□ -0.68
VARS2-202ENST00000421263 ATP6V1G1O75348 118 aa10.79□□□□□ -0.68
VARS2-202ENST00000421263 PPDPFQ9H3Y8 114 aa10.79□□□□□ -0.68
VARS2-202ENST00000421263 ZNF706Q9Y5V0 76 aaPredicted RBP10.79□□□□□ -0.68
VARS2-202ENST00000421263 LINC00587B1AMM8 73 aa10.78□□□□□ -0.68
VARS2-202ENST00000421263 MEIG1Q5JSS6 88 aa10.78□□□□□ -0.68
VARS2-202ENST00000421263 SMCR5Q8TEV8 140 aa10.77□□□□□ -0.69
VARS2-202ENST00000421263 NDUFA12Q9UI09 145 aa10.77□□□□□ -0.69
VARS2-202ENST00000421263 LOC107984156A0A0G2JMH3 177 aa10.76□□□□□ -0.69
VARS2-202ENST00000421263 NCR3O14931 201 aa10.76□□□□□ -0.69
VARS2-202ENST00000421263 ARL17AQ8IVW1 177 aa10.76□□□□□ -0.69
VARS2-202ENST00000421263 FAM19A2Q8N3H0 131 aa10.76□□□□□ -0.69
VARS2-202ENST00000421263 MYMXA0A1B0GTQ4 84 aa10.75□□□□□ -0.69
VARS2-202ENST00000421263 HSBP1O75506 76 aa10.75□□□□□ -0.69
VARS2-202ENST00000421263 FP248Q71RG6 208 aaPredicted RBP10.75□□□□□ -0.69
VARS2-202ENST00000421263 TRBV10-3A0A0K0K1G6 114 aa10.74□□□□□ -0.69
VARS2-202ENST00000421263 ETDCA0A1B0GVM5 59 aa10.73□□□□□ -0.69
VARS2-202ENST00000421263 LINC00483Q53H64 154 aa10.73□□□□□ -0.69
VARS2-202ENST00000421263 C4orf48Q5BLP8 95 aa10.73□□□□□ -0.69
VARS2-202ENST00000421263 MAP1LC3CQ9BXW4 147 aa10.73□□□□□ -0.69
VARS2-202ENST00000421263 DAND5Q8N907 189 aa10.72□□□□□ -0.69
VARS2-202ENST00000421263 Q8NBF4 154 aa10.72□□□□□ -0.69
VARS2-202ENST00000421263 TSPEAR-AS2P59090 65 aa10.71□□□□□ -0.69
VARS2-202ENST00000421263 B5MCH6 92 aa10.7□□□□□ -0.7
VARS2-202ENST00000421263 LEPROTO15243 131 aa10.7□□□□□ -0.7
VARS2-202ENST00000421263 LINC00310P59036 64 aa10.7□□□□□ -0.7
VARS2-202ENST00000421263 KRTAP9-2Q9BYQ4 174 aa10.7□□□□□ -0.7
VARS2-202ENST00000421263 TRBV10-2A0A0K0K1G8 114 aa10.69□□□□□ -0.7
VARS2-202ENST00000421263 SPINK1P00995 79 aa10.69□□□□□ -0.7
VARS2-202ENST00000421263 LEPROTL1O95214 131 aa10.68□□□□□ -0.7
VARS2-202ENST00000421263 TRGC2P03986 189 aa10.68□□□□□ -0.7
VARS2-202ENST00000421263 KRTAP13-3Q3SY46 172 aa10.68□□□□□ -0.7
VARS2-202ENST00000421263 H0Y8G0 127 aa10.67□□□□□ -0.7
VARS2-202ENST00000421263 ERC2-IT1O76042 136 aa10.67□□□□□ -0.7
VARS2-202ENST00000421263 S100A12P80511 92 aa10.67□□□□□ -0.7
VARS2-202ENST00000421263 PLNP26678 52 aa10.66□□□□□ -0.7
VARS2-202ENST00000421263 DDTP30046 118 aa10.66□□□□□ -0.7
VARS2-202ENST00000421263 GAGE2AQ6NT46 116 aa10.66□□□□□ -0.7
VARS2-202ENST00000421263 J3QQQ9 107 aa10.65□□□□□ -0.7
VARS2-202ENST00000421263 SERF1AO75920 110 aa10.65□□□□□ -0.7
VARS2-202ENST00000421263 SSBP3-AS1Q7Z2R9 100 aa10.65□□□□□ -0.7
VARS2-202ENST00000421263 Q9BRP9 147 aa10.65□□□□□ -0.7
VARS2-202ENST00000421263 NDUFC2O95298 119 aa10.63□□□□□ -0.71
VARS2-202ENST00000421263 NMUP48645 174 aa10.63□□□□□ -0.71
VARS2-202ENST00000421263 RPS29P62273 56 aaKnown RBP10.63□□□□□ -0.71
VARS2-202ENST00000421263 Q6ZRX8 168 aa10.63□□□□□ -0.71
VARS2-202ENST00000421263 SPANXB1Q9NS25 103 aaPredicted RBP10.63□□□□□ -0.71
VARS2-202ENST00000421263 DPM2O94777 84 aa10.62□□□□□ -0.71
VARS2-202ENST00000421263 IGLV6-57P01721 117 aa10.62□□□□□ -0.71
VARS2-202ENST00000421263 ASB16-AS1Q495Z4 193 aa10.62□□□□□ -0.71
VARS2-202ENST00000421263 HSPB8Q9UJY1 196 aa10.61□□□□□ -0.71
VARS2-202ENST00000421263 HERVK_113P61574 105 aa10.6□□□□□ -0.71
VARS2-202ENST00000421263 MOBPQ13875 183 aa10.6□□□□□ -0.71
VARS2-202ENST00000421263 PMCHL2Q9BQD1 86 aa10.6□□□□□ -0.71
VARS2-202ENST00000421263 IGLV9-49A0A0B4J1Y8 123 aa10.59□□□□□ -0.71
VARS2-202ENST00000421263 IGKCP01834 107 aa10.59□□□□□ -0.71
VARS2-202ENST00000421263 FABP4P15090 132 aa10.59□□□□□ -0.71
VARS2-202ENST00000421263 Q8N377 158 aa10.59□□□□□ -0.71
VARS2-202ENST00000421263 LGALS3P17931 250 aaKnown RBP10.58□□□□□ -0.72
VARS2-202ENST00000421263 MIEN1Q9BRT3 115 aa10.58□□□□□ -0.72
VARS2-202ENST00000421263 EIF4EBP3O60516 100 aaPredicted RBP10.57□□□□□ -0.72
VARS2-202ENST00000421263 S100A7L2Q5SY68 101 aa10.57□□□□□ -0.72
VARS2-202ENST00000421263 SOSTDC1Q6X4U4 206 aa10.57□□□□□ -0.72
VARS2-202ENST00000421263 ADAMTSL4-AS1Q5T5F5 129 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms