RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 A0A0B4J2C4 111 aa9.2□□□□□ -0.94
SHMT1P1-201ENST00000419974 A4D1N5 150 aa9.2□□□□□ -0.94
SHMT1P1-201ENST00000419974 A6NDN8 102 aa9.2□□□□□ -0.94
SHMT1P1-201ENST00000419974 EIF4EBP3O60516 100 aaPredicted RBP9.2□□□□□ -0.94
SHMT1P1-201ENST00000419974 A0A0U1RRA0 63 aa9.19□□□□□ -0.94
SHMT1P1-201ENST00000419974 C16orf90A8MZG2 172 aa9.18□□□□□ -0.94
SHMT1P1-201ENST00000419974 TNP2Q05952 138 aa9.18□□□□□ -0.94
SHMT1P1-201ENST00000419974 A0A1B0GVY2 172 aa9.17□□□□□ -0.94
SHMT1P1-201ENST00000419974 CFC1BP0CG36 223 aa9.17□□□□□ -0.94
SHMT1P1-201ENST00000419974 CFC1P0CG37 223 aa9.17□□□□□ -0.94
SHMT1P1-201ENST00000419974 COL5A1-AS1Q5SY13 56 aa9.17□□□□□ -0.94
SHMT1P1-201ENST00000419974 SDIM1Q6ZPB5 146 aa9.17□□□□□ -0.94
SHMT1P1-201ENST00000419974 LINC00474Q9P2X8 69 aa9.17□□□□□ -0.94
SHMT1P1-201ENST00000419974 TRBV10-2A0A0K0K1G8 114 aa9.16□□□□□ -0.94
SHMT1P1-201ENST00000419974 PGPEP1Q9NXJ5 209 aa9.16□□□□□ -0.94
SHMT1P1-201ENST00000419974 PKD1P98161 4303 aa9.16□□□□□ -0.94
SHMT1P1-201ENST00000419974 DNAH5Q8TE73 4624 aa9.15□□□□□ -0.94
SHMT1P1-201ENST00000419974 HERC2O95714 4834 aa9.15□□□□□ -0.94
SHMT1P1-201ENST00000419974 PKHD1P08F94 4074 aa9.15□□□□□ -0.94
SHMT1P1-201ENST00000419974 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.15□□□□□ -0.94
SHMT1P1-201ENST00000419974 IGLV5-37A0A075B6J1 123 aa9.14□□□□□ -0.95
SHMT1P1-201ENST00000419974 C9orf129Q5T035 196 aaKnown RBP9.14□□□□□ -0.95
SHMT1P1-201ENST00000419974 NHP2Q9NX24 153 aaKnown RBP9.14□□□□□ -0.95
SHMT1P1-201ENST00000419974 IGKV2-28A0A075B6P5 120 aa9.13□□□□□ -0.95
SHMT1P1-201ENST00000419974 TRAV13-2A0A0B4J235 113 aa9.13□□□□□ -0.95
SHMT1P1-201ENST00000419974 EPM2AB3EWF7 344 aa9.13□□□□□ -0.95
SHMT1P1-201ENST00000419974 IGKV2D-28P01615 120 aa9.13□□□□□ -0.95
SHMT1P1-201ENST00000419974 NPC2P61916 151 aa9.13□□□□□ -0.95
SHMT1P1-201ENST00000419974 PRO1854Q9UHT4 67 aa9.13□□□□□ -0.95
SHMT1P1-201ENST00000419974 KIAA1109Q2LD37 5005 aa9.12□□□□□ -0.95
SHMT1P1-201ENST00000419974 VPREB1P12018 145 aa9.12□□□□□ -0.95
SHMT1P1-201ENST00000419974 RPL18AQ02543 176 aaKnown RBP9.12□□□□□ -0.95
SHMT1P1-201ENST00000419974 XAGE1AQ9HD64 81 aa9.12□□□□□ -0.95
SHMT1P1-201ENST00000419974 BATFQ16520 125 aa9.11□□□□□ -0.95
SHMT1P1-201ENST00000419974 GAGE2EQ4V326 116 aa9.11□□□□□ -0.95
SHMT1P1-201ENST00000419974 GAGE2DQ9UEU5 116 aa9.11□□□□□ -0.95
SHMT1P1-201ENST00000419974 IGLV5-52A0A0A0MRZ9 124 aa9.1□□□□□ -0.95
SHMT1P1-201ENST00000419974 Q8NDZ9 215 aa9.1□□□□□ -0.95
SHMT1P1-201ENST00000419974 RAB37Q96AX2 223 aa9.1□□□□□ -0.95
SHMT1P1-201ENST00000419974 A0A096LNI7 61 aa9.09□□□□□ -0.95
SHMT1P1-201ENST00000419974 TAX1BP3O14907 124 aa9.09□□□□□ -0.95
SHMT1P1-201ENST00000419974 GAGE2BQ13066 116 aa9.09□□□□□ -0.95
SHMT1P1-201ENST00000419974 LINC00337Q8N6G1 96 aa9.08□□□□□ -0.96
SHMT1P1-201ENST00000419974 TMEM126AQ9H061 195 aa9.08□□□□□ -0.96
SHMT1P1-201ENST00000419974 DNAH8Q96JB1 4490 aa9.08□□□□□ -0.96
SHMT1P1-201ENST00000419974 DYNC1H1Q14204 4646 aaKnown RBP9.08□□□□□ -0.96
SHMT1P1-201ENST00000419974 M0R378 163 aa9.07□□□□□ -0.96
SHMT1P1-201ENST00000419974 IGLV6-57P01721 117 aa9.07□□□□□ -0.96
SHMT1P1-201ENST00000419974 CBY1Q9Y3M2 126 aa9.07□□□□□ -0.96
SHMT1P1-201ENST00000419974 C9orf118A6NHY6 69 aa9.06□□□□□ -0.96
SHMT1P1-201ENST00000419974 K7ERJ3 54 aa9.06□□□□□ -0.96
SHMT1P1-201ENST00000419974 KRTAP10-2P60368 255 aa9.06□□□□□ -0.96
SHMT1P1-201ENST00000419974 KRTAP7-1Q8IUC3 87 aa9.06□□□□□ -0.96
SHMT1P1-201ENST00000419974 SPACA4Q8TDM5 124 aa9.06□□□□□ -0.96
SHMT1P1-201ENST00000419974 SERTAD4-AS1Q5TG53 156 aa9.05□□□□□ -0.96
SHMT1P1-201ENST00000419974 TSPAN13O95857 204 aa9.04□□□□□ -0.96
SHMT1P1-201ENST00000419974 RPL13AP40429 203 aaKnown RBP9.04□□□□□ -0.96
SHMT1P1-201ENST00000419974 RPL28P46779 137 aaKnown RBP9.04□□□□□ -0.96
SHMT1P1-201ENST00000419974 PRR3P79522 188 aaKnown RBP9.04□□□□□ -0.96
SHMT1P1-201ENST00000419974 Q6ZSA8 131 aa9.04□□□□□ -0.96
SHMT1P1-201ENST00000419974 NKAPP1Q8N9T2 125 aa9.03□□□□□ -0.96
SHMT1P1-201ENST00000419974 C22orf24Q9Y442 160 aa9.03□□□□□ -0.96
SHMT1P1-201ENST00000419974 IGKV2-24A0A0C4DH68 120 aa9.02□□□□□ -0.97
SHMT1P1-201ENST00000419974 A0A1W2PNN7 141 aa9.02□□□□□ -0.97
SHMT1P1-201ENST00000419974 KCNQ1DNQ9H478 68 aa9.02□□□□□ -0.97
SHMT1P1-201ENST00000419974 PLAC8Q9NZF1 115 aa9.02□□□□□ -0.97
SHMT1P1-201ENST00000419974 PCLOQ9Y6V0 5065 aa9.01□□□□□ -0.97
SHMT1P1-201ENST00000419974 FAM168BA1KXE4 195 aa9.01□□□□□ -0.97
SHMT1P1-201ENST00000419974 NCR3O14931 201 aa9.01□□□□□ -0.97
SHMT1P1-201ENST00000419974 LINC01620Q4KN68 170 aa9.01□□□□□ -0.97
SHMT1P1-201ENST00000419974 S100A7L2Q5SY68 101 aa9.01□□□□□ -0.97
SHMT1P1-201ENST00000419974 MRPL55Q7Z7F7 128 aaKnown RBP9.01□□□□□ -0.97
SHMT1P1-201ENST00000419974 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.01□□□□□ -0.97
SHMT1P1-201ENST00000419974 IGLV1-50A0A075B6I6 118 aa9□□□□□ -0.97
SHMT1P1-201ENST00000419974 C7orf33Q8WU49 177 aa9□□□□□ -0.97
SHMT1P1-201ENST00000419974 LRP1BQ9NZR2 4599 aa9□□□□□ -0.97
SHMT1P1-201ENST00000419974 TRBV7-6A0A0J9YX20 115 aa8.99□□□□□ -0.97
SHMT1P1-201ENST00000419974 TRBV10-3A0A0K0K1G6 114 aa8.99□□□□□ -0.97
SHMT1P1-201ENST00000419974 A0A1W2PPM0 123 aa8.99□□□□□ -0.97
SHMT1P1-201ENST00000419974 PANO1I0J062 215 aa8.99□□□□□ -0.97
SHMT1P1-201ENST00000419974 CHTF8P0CG12 524 aa8.99□□□□□ -0.97
SHMT1P1-201ENST00000419974 LYRM7Q5U5X0 104 aa8.99□□□□□ -0.97
SHMT1P1-201ENST00000419974 OR13C6PQ8NH95 151 aa8.99□□□□□ -0.97
SHMT1P1-201ENST00000419974 SMIM11BQ8TCY0 68 aa8.99□□□□□ -0.97
SHMT1P1-201ENST00000419974 RYR1P21817 5038 aa8.98□□□□□ -0.97
SHMT1P1-201ENST00000419974 COX6CP09669 75 aa8.98□□□□□ -0.97
SHMT1P1-201ENST00000419974 LINC00167Q96N53 147 aa8.98□□□□□ -0.97
SHMT1P1-201ENST00000419974 A0A087WYN8 130 aa8.97□□□□□ -0.97
SHMT1P1-201ENST00000419974 H3BUT2 72 aa8.97□□□□□ -0.97
SHMT1P1-201ENST00000419974 M0QXV9 152 aa8.97□□□□□ -0.97
SHMT1P1-201ENST00000419974 TRIAP1O43715 76 aa8.97□□□□□ -0.97
SHMT1P1-201ENST00000419974 SPRR1AP35321 89 aa8.97□□□□□ -0.97
SHMT1P1-201ENST00000419974 Q1RN00 199 aa8.97□□□□□ -0.97
SHMT1P1-201ENST00000419974 FAM19A5Q7Z5A7 132 aaPredicted RBP8.97□□□□□ -0.97
SHMT1P1-201ENST00000419974 KRTAP17-1Q9BYP8 105 aa8.97□□□□□ -0.97
SHMT1P1-201ENST00000419974 TRBV20-1A0A075B6N2 111 aa8.96□□□□□ -0.98
SHMT1P1-201ENST00000419974 TRAV23DV6A0A075B6W5 121 aa8.96□□□□□ -0.98
SHMT1P1-201ENST00000419974 H0YGX0 51 aa8.96□□□□□ -0.98
SHMT1P1-201ENST00000419974 FABP2P12104 132 aa8.96□□□□□ -0.98
SHMT1P1-201ENST00000419974 PRYO14603 147 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms