RNA–Protein interactions for RNA: ENST00000416781.1

TTC39DP-201, Transcript of tetratricopeptide repeat domain 39D, pseudogene, humanhuman

BASIC

Gene TTC39DP, Length 1,688 nt, Biotype unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39DP-201ENST00000416781 RPS27LQ71UM5 84 aaKnown RBP3.04□□□□□ -1.92
TTC39DP-201ENST00000416781 ANAPC11Q9NYG5 84 aa3.04□□□□□ -1.92
TTC39DP-201ENST00000416781 KCNQ1DNQ9H478 68 aa3.03□□□□□ -1.92
TTC39DP-201ENST00000416781 IGLV4-69A0A075B6H9 119 aa3.02□□□□□ -1.93
TTC39DP-201ENST00000416781 Q96NJ1 140 aa3.02□□□□□ -1.93
TTC39DP-201ENST00000416781 A0A1W2PNN7 141 aa3.01□□□□□ -1.93
TTC39DP-201ENST00000416781 RPL38P63173 70 aaKnown RBP3.01□□□□□ -1.93
TTC39DP-201ENST00000416781 HAMPP81172 84 aa3.01□□□□□ -1.93
TTC39DP-201ENST00000416781 TFF3Q07654 80 aa3.01□□□□□ -1.93
TTC39DP-201ENST00000416781 CCL26Q9Y258 94 aa3.01□□□□□ -1.93
TTC39DP-201ENST00000416781 ETDCA0A1B0GVM5 59 aa3□□□□□ -1.93
TTC39DP-201ENST00000416781 NCR3O14931 201 aa3□□□□□ -1.93
TTC39DP-201ENST00000416781 COX17Q14061 63 aa3□□□□□ -1.93
TTC39DP-201ENST00000416781 LCE3EQ5T5B0 92 aa3□□□□□ -1.93
TTC39DP-201ENST00000416781 TRGV2A0A075B6R0 118 aa2.99□□□□□ -1.93
TTC39DP-201ENST00000416781 IGKV4-1P06312 121 aa2.99□□□□□ -1.93
TTC39DP-201ENST00000416781 RPL37AP61513 92 aaKnown RBP2.99□□□□□ -1.93
TTC39DP-201ENST00000416781 TPRXLQ17RH7 258 aa2.99□□□□□ -1.93
TTC39DP-201ENST00000416781 C5orf56Q8N8D9 126 aa2.99□□□□□ -1.93
TTC39DP-201ENST00000416781 IGLV4-60A0A075B6I1 120 aa2.98□□□□□ -1.93
TTC39DP-201ENST00000416781 IGKV2-29A2NJV5 120 aaPredicted RBP2.98□□□□□ -1.93
TTC39DP-201ENST00000416781 KRTAP11-1Q8IUC1 163 aa2.98□□□□□ -1.93
TTC39DP-201ENST00000416781 SPACA4Q8TDM5 124 aa2.98□□□□□ -1.93
TTC39DP-201ENST00000416781 RTTNQ86VV8 2226 aa2.98□□□□□ -1.93
TTC39DP-201ENST00000416781 CADP27708 2225 aa2.98□□□□□ -1.93
TTC39DP-201ENST00000416781 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.98□□□□□ -1.93
TTC39DP-201ENST00000416781 TRGV1A0A0A0MS02 117 aa2.98□□□□□ -1.93
TTC39DP-201ENST00000416781 PDE4DIPQ5VU43 2346 aa2.98□□□□□ -1.93
TTC39DP-201ENST00000416781 ATRXP46100 2492 aa2.97□□□□□ -1.93
TTC39DP-201ENST00000416781 ABCA1O95477 2261 aa2.97□□□□□ -1.93
TTC39DP-201ENST00000416781 COX7BP24311 80 aa2.97□□□□□ -1.93
TTC39DP-201ENST00000416781 LINC00304Q8N9R0 145 aa2.97□□□□□ -1.93
TTC39DP-201ENST00000416781 A0A0G2JQZ4 141 aa2.96□□□□□ -1.94
TTC39DP-201ENST00000416781 IAPPP10997 89 aa2.96□□□□□ -1.94
TTC39DP-201ENST00000416781 LY6EQ16553 131 aa2.96□□□□□ -1.94
TTC39DP-201ENST00000416781 ARHGAP5-AS1Q96IT6 56 aa2.96□□□□□ -1.94
TTC39DP-201ENST00000416781 CNFNQ9BYD5 112 aa2.96□□□□□ -1.94
TTC39DP-201ENST00000416781 COL4A2P08572 1712 aa2.95□□□□□ -1.94
TTC39DP-201ENST00000416781 CPSF4LA6NMK7 179 aaKnown RBP2.95□□□□□ -1.94
TTC39DP-201ENST00000416781 KRTAP12-2P59991 146 aa2.95□□□□□ -1.94
TTC39DP-201ENST00000416781 A0A1B0GU69 56 aa2.95□□□□□ -1.94
TTC39DP-201ENST00000416781 HRES1P13985 223 aa2.95□□□□□ -1.94
TTC39DP-201ENST00000416781 SSC5DA1L4H1 1573 aa2.95□□□□□ -1.94
TTC39DP-201ENST00000416781 SORL1Q92673 2214 aa2.94□□□□□ -1.94
TTC39DP-201ENST00000416781 IGLV6-57P01721 117 aa2.93□□□□□ -1.94
TTC39DP-201ENST00000416781 TECTAO75443 2155 aa2.93□□□□□ -1.94
TTC39DP-201ENST00000416781 SHANK1Q9Y566 2161 aa2.93□□□□□ -1.94
TTC39DP-201ENST00000416781 URB1O60287 2271 aaKnown RBP2.92□□□□□ -1.94
TTC39DP-201ENST00000416781 C10orf55Q5SWW7 151 aa2.92□□□□□ -1.94
TTC39DP-201ENST00000416781 LINC01590Q5TEZ4 76 aa2.92□□□□□ -1.94
TTC39DP-201ENST00000416781 KNTC1P50748 2209 aa2.91□□□□□ -1.94
TTC39DP-201ENST00000416781 ALMS1Q8TCU4 4167 aa2.91□□□□□ -1.94
TTC39DP-201ENST00000416781 LINC00315P59091 139 aa2.91□□□□□ -1.94
TTC39DP-201ENST00000416781 FXYD4P59646 89 aa2.91□□□□□ -1.94
TTC39DP-201ENST00000416781 LINC00308Q8TCZ7 52 aa2.91□□□□□ -1.94
TTC39DP-201ENST00000416781 SMIM2Q9BVW6 85 aa2.91□□□□□ -1.94
TTC39DP-201ENST00000416781 TTTY10Q9BZA0 68 aa2.91□□□□□ -1.94
TTC39DP-201ENST00000416781 CEP350Q5VT06 3117 aa2.9□□□□□ -1.95
TTC39DP-201ENST00000416781 PRB2P02812 416 aaPredicted RBP2.9□□□□□ -1.95
TTC39DP-201ENST00000416781 PCNTO95613 3336 aa2.9□□□□□ -1.95
TTC39DP-201ENST00000416781 FN1P02751 2386 aaKnown RBP2.89□□□□□ -1.95
TTC39DP-201ENST00000416781 AHCTF1Q8WYP5 2266 aa2.89□□□□□ -1.95
TTC39DP-201ENST00000416781 ACYP2P14621 99 aa2.88□□□□□ -1.95
TTC39DP-201ENST00000416781 CRIP1P50238 77 aa2.88□□□□□ -1.95
TTC39DP-201ENST00000416781 PTPRQQ9UMZ3 2332 aa2.88□□□□□ -1.95
TTC39DP-201ENST00000416781 CNOT1A5YKK6 2376 aaKnown RBP2.87□□□□□ -1.95
TTC39DP-201ENST00000416781 DEFB131BA0A096LNP1 70 aa2.87□□□□□ -1.95
TTC39DP-201ENST00000416781 COL4A4P53420 1690 aaPredicted RBP2.87□□□□□ -1.95
TTC39DP-201ENST00000416781 NDUFA1O15239 70 aa2.86□□□□□ -1.95
TTC39DP-201ENST00000416781 PRB1P04280 392 aa2.86□□□□□ -1.95
TTC39DP-201ENST00000416781 INE1O15225 51 aa2.85□□□□□ -1.95
TTC39DP-201ENST00000416781 LINC00158P58513 81 aa2.85□□□□□ -1.95
TTC39DP-201ENST00000416781 DEFB134Q4QY38 66 aa2.85□□□□□ -1.95
TTC39DP-201ENST00000416781 H3BRN7 92 aa2.85□□□□□ -1.95
TTC39DP-201ENST00000416781 CCL19Q99731 98 aa2.85□□□□□ -1.95
TTC39DP-201ENST00000416781 ASXL3Q9C0F0 2248 aa2.84□□□□□ -1.95
TTC39DP-201ENST00000416781 Q6ZQY7 126 aa2.84□□□□□ -1.95
TTC39DP-201ENST00000416781 Q8N9L7 120 aa2.84□□□□□ -1.95
TTC39DP-201ENST00000416781 SMIM11BQ8TCY0 68 aa2.84□□□□□ -1.95
TTC39DP-201ENST00000416781 MRPL33O75394 65 aaKnown RBP2.83□□□□□ -1.96
TTC39DP-201ENST00000416781 M0R2N4 97 aa2.82□□□□□ -1.96
TTC39DP-201ENST00000416781 G3V318 75 aa2.82□□□□□ -1.96
TTC39DP-201ENST00000416781 LY6G6CO95867 125 aa2.82□□□□□ -1.96
TTC39DP-201ENST00000416781 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.81□□□□□ -1.96
TTC39DP-201ENST00000416781 BRCA2P51587 3418 aa2.81□□□□□ -1.96
TTC39DP-201ENST00000416781 LOC730098B7Z3J9 87 aa2.81□□□□□ -1.96
TTC39DP-201ENST00000416781 SSBP3-AS1Q7Z2R9 100 aa2.8□□□□□ -1.96
TTC39DP-201ENST00000416781 GPR179Q6PRD1 2367 aa2.8□□□□□ -1.96
TTC39DP-201ENST00000416781 KRTAP10-8P60410 259 aa2.79□□□□□ -1.96
TTC39DP-201ENST00000416781 Q8IZM0 81 aa2.79□□□□□ -1.96
TTC39DP-201ENST00000416781 CDKN2A-AS1Q9UH64 79 aa2.79□□□□□ -1.96
TTC39DP-201ENST00000416781 NOTCH2Q04721 2471 aa2.79□□□□□ -1.96
TTC39DP-201ENST00000416781 DOPEY2Q9Y3R5 2298 aa2.79□□□□□ -1.96
TTC39DP-201ENST00000416781 CENPFP49454 3210 aa2.79□□□□□ -1.96
TTC39DP-201ENST00000416781 IGKV2D-24A0A075B6R9 120 aa2.79□□□□□ -1.96
TTC39DP-201ENST00000416781 KNL1Q8NG31 2342 aa2.78□□□□□ -1.96
TTC39DP-201ENST00000416781 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.78□□□□□ -1.96
TTC39DP-201ENST00000416781 HTTP42858 3142 aa2.78□□□□□ -1.96
TTC39DP-201ENST00000416781 IGKV2-28A0A075B6P5 120 aa2.77□□□□□ -1.97
TTC39DP-201ENST00000416781 H3BSH0 61 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms