RNA–Protein interactions for RNA: ENST00000416571.5

MDC1-202, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-202ENST00000416571 CST9LQ9H4G1 147 aa5.69□□□□□ -1.5
MDC1-202ENST00000416571 SND1-IT1Q9HBX3 110 aa5.69□□□□□ -1.5
MDC1-202ENST00000416571 ERG28Q9UKR5 140 aa5.69□□□□□ -1.5
MDC1-202ENST00000416571 ADCYAP1P18509 176 aa5.68□□□□□ -1.5
MDC1-202ENST00000416571 PMVKQ15126 192 aa5.68□□□□□ -1.5
MDC1-202ENST00000416571 SPRR4Q96PI1 79 aa5.68□□□□□ -1.5
MDC1-202ENST00000416571 NDUFA12Q9UI09 145 aa5.68□□□□□ -1.5
MDC1-202ENST00000416571 COX17Q14061 63 aa5.67□□□□□ -1.5
MDC1-202ENST00000416571 KIAA1644Q3SXP7 199 aa5.67□□□□□ -1.5
MDC1-202ENST00000416571 DAND5Q8N907 189 aa5.67□□□□□ -1.5
MDC1-202ENST00000416571 Q8NBF4 154 aa5.67□□□□□ -1.5
MDC1-202ENST00000416571 A0A1B0GVG6 124 aa5.66□□□□□ -1.5
MDC1-202ENST00000416571 SPINK1P00995 79 aa5.66□□□□□ -1.5
MDC1-202ENST00000416571 ZNF625Q96I27 306 aaPredicted RBP5.66□□□□□ -1.5
MDC1-202ENST00000416571 SLC7A5P1Q8MH63 180 aa5.65□□□□□ -1.5
MDC1-202ENST00000416571 FAM19A2Q8N3H0 131 aa5.65□□□□□ -1.5
MDC1-202ENST00000416571 IGLV5-39A0A0G2JS06 123 aa5.64□□□□□ -1.51
MDC1-202ENST00000416571 NDUFA6P56556 154 aa5.64□□□□□ -1.51
MDC1-202ENST00000416571 KRTAP4-1Q9BYQ7 146 aa5.64□□□□□ -1.51
MDC1-202ENST00000416571 SMCO4Q9NRQ5 59 aa5.64□□□□□ -1.51
MDC1-202ENST00000416571 ATP6V1G1O75348 118 aa5.63□□□□□ -1.51
MDC1-202ENST00000416571 IGLC3P0DOY3 106 aa5.63□□□□□ -1.51
MDC1-202ENST00000416571 SFTA2Q6UW10 78 aa5.63□□□□□ -1.51
MDC1-202ENST00000416571 FA2HQ7L5A8 372 aa5.63□□□□□ -1.51
MDC1-202ENST00000416571 Q8NDZ9 215 aa5.63□□□□□ -1.51
MDC1-202ENST00000416571 SVIPQ8NHG7 77 aa5.63□□□□□ -1.51
MDC1-202ENST00000416571 ZNF22P17026 224 aaPredicted RBP5.62□□□□□ -1.51
MDC1-202ENST00000416571 LINC00158P58513 81 aa5.62□□□□□ -1.51
MDC1-202ENST00000416571 LINC01546A6NGU7 62 aa5.61□□□□□ -1.51
MDC1-202ENST00000416571 PRYO14603 147 aa5.61□□□□□ -1.51
MDC1-202ENST00000416571 SMCR5Q8TEV8 140 aa5.61□□□□□ -1.51
MDC1-202ENST00000416571 A0A0U1RRA0 63 aa5.6□□□□□ -1.51
MDC1-202ENST00000416571 ETDCA0A1B0GVM5 59 aa5.6□□□□□ -1.51
MDC1-202ENST00000416571 S100A12P80511 92 aa5.6□□□□□ -1.51
MDC1-202ENST00000416571 TMEM170BQ5T4T1 132 aa5.6□□□□□ -1.51
MDC1-202ENST00000416571 TRAV9-1A0A075B6T8 112 aa5.59□□□□□ -1.51
MDC1-202ENST00000416571 IGLV9-49A0A0B4J1Y8 123 aa5.59□□□□□ -1.51
MDC1-202ENST00000416571 SLC25A20O43772 301 aa5.59□□□□□ -1.51
MDC1-202ENST00000416571 RPS29P62273 56 aaKnown RBP5.59□□□□□ -1.51
MDC1-202ENST00000416571 MOBPQ13875 183 aa5.59□□□□□ -1.51
MDC1-202ENST00000416571 ANKRD39Q53RE8 183 aa5.59□□□□□ -1.51
MDC1-202ENST00000416571 GAGE2AQ6NT46 116 aa5.59□□□□□ -1.51
MDC1-202ENST00000416571 S100PP25815 95 aa5.58□□□□□ -1.52
MDC1-202ENST00000416571 XP32Q5T750 250 aa5.58□□□□□ -1.52
MDC1-202ENST00000416571 Q8N377 158 aa5.58□□□□□ -1.52
MDC1-202ENST00000416571 NCR3O14931 201 aa5.57□□□□□ -1.52
MDC1-202ENST00000416571 LINC00483Q53H64 154 aa5.57□□□□□ -1.52
MDC1-202ENST00000416571 SSBP3-AS1Q7Z2R9 100 aa5.57□□□□□ -1.52
MDC1-202ENST00000416571 BOD1L2Q8IYS8 172 aa5.57□□□□□ -1.52
MDC1-202ENST00000416571 C11orf86A6NJI1 115 aa5.56□□□□□ -1.52
MDC1-202ENST00000416571 CFC1BP0CG36 223 aa5.56□□□□□ -1.52
MDC1-202ENST00000416571 SPRR1AP35321 89 aa5.56□□□□□ -1.52
MDC1-202ENST00000416571 FABP9Q0Z7S8 132 aa5.56□□□□□ -1.52
MDC1-202ENST00000416571 COX19Q49B96 90 aa5.56□□□□□ -1.52
MDC1-202ENST00000416571 MEIG1Q5JSS6 88 aa5.56□□□□□ -1.52
MDC1-202ENST00000416571 BAGE3Q86Y29 109 aa5.56□□□□□ -1.52
MDC1-202ENST00000416571 KCNQ1DNQ9H478 68 aa5.56□□□□□ -1.52
MDC1-202ENST00000416571 HBDP02042 147 aa5.55□□□□□ -1.52
MDC1-202ENST00000416571 SMIM13P0DJ93 91 aa5.55□□□□□ -1.52
MDC1-202ENST00000416571 TRBV10-3A0A0K0K1G6 114 aa5.54□□□□□ -1.52
MDC1-202ENST00000416571 KRTAP4-16G5E9R7 235 aaPredicted RBP5.54□□□□□ -1.52
MDC1-202ENST00000416571 LCE2CQ5TA81 110 aa5.54□□□□□ -1.52
MDC1-202ENST00000416571 A0A096LNJ9 63 aa5.53□□□□□ -1.52
MDC1-202ENST00000416571 LINC00614P0C842 121 aa5.53□□□□□ -1.52
MDC1-202ENST00000416571 C9orf153Q5TBE3 101 aa5.53□□□□□ -1.52
MDC1-202ENST00000416571 MIR7-3HGQ8N6C7 128 aa5.53□□□□□ -1.52
MDC1-202ENST00000416571 LINC00587B1AMM8 73 aa5.52□□□□□ -1.53
MDC1-202ENST00000416571 B5MCH6 92 aa5.52□□□□□ -1.53
MDC1-202ENST00000416571 PMCHL1Q16048 86 aa5.52□□□□□ -1.53
MDC1-202ENST00000416571 MAP1LC3CQ9BXW4 147 aa5.52□□□□□ -1.53
MDC1-202ENST00000416571 SEC11CQ9BY50 192 aa5.52□□□□□ -1.53
MDC1-202ENST00000416571 CHTOPQ9Y3Y2 248 aaKnown RBP5.52□□□□□ -1.53
MDC1-202ENST00000416571 IGLV8-61A0A075B6I0 122 aa5.51□□□□□ -1.53
MDC1-202ENST00000416571 TMEM223A0PJW6 202 aa5.51□□□□□ -1.53
MDC1-202ENST00000416571 ERC2-IT1O76042 136 aa5.51□□□□□ -1.53
MDC1-202ENST00000416571 HERV-K104P63124 156 aa5.51□□□□□ -1.53
MDC1-202ENST00000416571 MT1HP80294 61 aa5.51□□□□□ -1.53
MDC1-202ENST00000416571 SYNE2Q8WXH0 6885 aaKnown RBP5.5□□□□□ -1.53
MDC1-202ENST00000416571 DDTP30046 118 aa5.5□□□□□ -1.53
MDC1-202ENST00000416571 PCOTHQ58A44 107 aa5.5□□□□□ -1.53
MDC1-202ENST00000416571 C18orf32Q8TCD1 76 aa5.5□□□□□ -1.53
MDC1-202ENST00000416571 JOSD1Q15040 202 aaPredicted RBP5.49□□□□□ -1.53
MDC1-202ENST00000416571 Q6ZRX8 168 aa5.49□□□□□ -1.53
MDC1-202ENST00000416571 URB1-AS1Q96HZ7 61 aa5.49□□□□□ -1.53
MDC1-202ENST00000416571 MYMXA0A1B0GTQ4 84 aa5.48□□□□□ -1.53
MDC1-202ENST00000416571 TMEM218A2RU14 115 aa5.48□□□□□ -1.53
MDC1-202ENST00000416571 M0R2T5 61 aa5.48□□□□□ -1.53
MDC1-202ENST00000416571 KRTAP19-2Q3LHN2 52 aa5.48□□□□□ -1.53
MDC1-202ENST00000416571 UQCC3Q6UW78 93 aa5.48□□□□□ -1.53
MDC1-202ENST00000416571 Q9BRP9 147 aa5.48□□□□□ -1.53
MDC1-202ENST00000416571 LIMD2Q9BT23 127 aa5.48□□□□□ -1.53
MDC1-202ENST00000416571 TRAPPC1Q9Y5R8 145 aa5.48□□□□□ -1.53
MDC1-202ENST00000416571 TRBV10-2A0A0K0K1G8 114 aa5.47□□□□□ -1.53
MDC1-202ENST00000416571 C9orf92A6NGG3 77 aa5.47□□□□□ -1.53
MDC1-202ENST00000416571 S100A7L2Q5SY68 101 aa5.47□□□□□ -1.53
MDC1-202ENST00000416571 MIEN1Q9BRT3 115 aa5.47□□□□□ -1.53
MDC1-202ENST00000416571 TRAV12-1A0A0B4J245 112 aa5.46□□□□□ -1.54
MDC1-202ENST00000416571 S100A6P06703 90 aa5.46□□□□□ -1.54
MDC1-202ENST00000416571 S100A1P23297 94 aa5.46□□□□□ -1.54
MDC1-202ENST00000416571 CLLU1Q5K131 121 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms