RNA–Protein interactions for RNA: ENST00000416188.2

PHRF1-203, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PHRF1, Length 5,227 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-203ENST00000416188 LINC01547P58512 204 aaPredicted RBP10.84□□□□□ -0.67
PHRF1-203ENST00000416188 HTTP42858 3142 aa10.84□□□□□ -0.67
PHRF1-203ENST00000416188 CHD9Q3L8U1 2897 aa10.84□□□□□ -0.67
PHRF1-203ENST00000416188 FLNAP21333 2647 aaKnown RBP10.84□□□□□ -0.67
PHRF1-203ENST00000416188 LINC00315P59091 139 aa10.83□□□□□ -0.68
PHRF1-203ENST00000416188 IGHV6-1A0A0B4J1U7 121 aa10.83□□□□□ -0.68
PHRF1-203ENST00000416188 SERP1Q9Y6X1 66 aa10.82□□□□□ -0.68
PHRF1-203ENST00000416188 ATRQ13535 2644 aa10.82□□□□□ -0.68
PHRF1-203ENST00000416188 ITPR3Q14573 2671 aa10.82□□□□□ -0.68
PHRF1-203ENST00000416188 DEFB116Q30KQ4 102 aa10.82□□□□□ -0.68
PHRF1-203ENST00000416188 IGHV3OR16-9A0A0B4J2B5 98 aa10.81□□□□□ -0.68
PHRF1-203ENST00000416188 KRTAP10-11P60412 298 aa10.81□□□□□ -0.68
PHRF1-203ENST00000416188 PRLHP81277 87 aa10.81□□□□□ -0.68
PHRF1-203ENST00000416188 LINC01561Q8N1V8 128 aa10.81□□□□□ -0.68
PHRF1-203ENST00000416188 Q8NAQ8 132 aa10.8□□□□□ -0.68
PHRF1-203ENST00000416188 F8WDY8 70 aa10.8□□□□□ -0.68
PHRF1-203ENST00000416188 PRYO14603 147 aa10.8□□□□□ -0.68
PHRF1-203ENST00000416188 LINC00846Q9NV44 126 aa10.8□□□□□ -0.68
PHRF1-203ENST00000416188 IGLV5-39A0A0G2JS06 123 aa10.8□□□□□ -0.68
PHRF1-203ENST00000416188 KRTAP1-1Q07627 177 aa10.79□□□□□ -0.68
PHRF1-203ENST00000416188 NBDYA0A0U1RRE5 68 aa10.79□□□□□ -0.68
PHRF1-203ENST00000416188 C16orf90A8MZG2 172 aa10.79□□□□□ -0.68
PHRF1-203ENST00000416188 H3BNG1 76 aa10.79□□□□□ -0.68
PHRF1-203ENST00000416188 KRTAP10-3P60369 221 aa10.78□□□□□ -0.68
PHRF1-203ENST00000416188 FAM19A4Q96LR4 140 aa10.78□□□□□ -0.68
PHRF1-203ENST00000416188 Q9UF83 564 aa10.78□□□□□ -0.68
PHRF1-203ENST00000416188 Q6ZVQ6 151 aa10.78□□□□□ -0.68
PHRF1-203ENST00000416188 SMCPP49901 116 aaPredicted RBP10.77□□□□□ -0.69
PHRF1-203ENST00000416188 CENPEQ02224 2701 aa10.77□□□□□ -0.69
PHRF1-203ENST00000416188 SOSTDC1Q6X4U4 206 aa10.77□□□□□ -0.69
PHRF1-203ENST00000416188 SMIM26A0A096LP01 95 aa10.76□□□□□ -0.69
PHRF1-203ENST00000416188 C22orf24Q9Y442 160 aa10.76□□□□□ -0.69
PHRF1-203ENST00000416188 RETNLBQ9BQ08 111 aa10.75□□□□□ -0.69
PHRF1-203ENST00000416188 C5orf42Q9H799 3197 aa10.75□□□□□ -0.69
PHRF1-203ENST00000416188 ZNF292O60281 2723 aa10.75□□□□□ -0.69
PHRF1-203ENST00000416188 PCOTHQ58A44 107 aa10.75□□□□□ -0.69
PHRF1-203ENST00000416188 FAM229AH3BQW9 127 aa10.75□□□□□ -0.69
PHRF1-203ENST00000416188 LINC01546A6NGU7 62 aa10.74□□□□□ -0.69
PHRF1-203ENST00000416188 LINC00588Q9Y4M8 146 aa10.73□□□□□ -0.69
PHRF1-203ENST00000416188 SMCR5Q8TEV8 140 aa10.72□□□□□ -0.69
PHRF1-203ENST00000416188 PRO0461Q9UI25 63 aa10.72□□□□□ -0.69
PHRF1-203ENST00000416188 SETXQ7Z333 2677 aaKnown RBP10.72□□□□□ -0.69
PHRF1-203ENST00000416188 TRBV7-6A0A0J9YX20 115 aa10.72□□□□□ -0.69
PHRF1-203ENST00000416188 LAMA3Q16787 3333 aa10.71□□□□□ -0.7
PHRF1-203ENST00000416188 TRBV7-7A0A0K0K1E9 115 aa10.7□□□□□ -0.7
PHRF1-203ENST00000416188 TEP1Q99973 2627 aaKnown RBP10.69□□□□□ -0.7
PHRF1-203ENST00000416188 KIAA0087Q14695 138 aa10.68□□□□□ -0.7
PHRF1-203ENST00000416188 C6orf48Q9UBA6 75 aa10.68□□□□□ -0.7
PHRF1-203ENST00000416188 TMEM254Q8TBM7 123 aa10.68□□□□□ -0.7
PHRF1-203ENST00000416188 H0Y9P7 68 aa10.68□□□□□ -0.7
PHRF1-203ENST00000416188 RTL8CO15255 209 aa10.67□□□□□ -0.7
PHRF1-203ENST00000416188 C19orf73Q9NVV2 129 aa10.67□□□□□ -0.7
PHRF1-203ENST00000416188 KLK9Q2XQG4 91 aa10.67□□□□□ -0.7
PHRF1-203ENST00000416188 LINC00167Q96N53 147 aa10.66□□□□□ -0.7
PHRF1-203ENST00000416188 BAHCC1Q9P281 2608 aa10.66□□□□□ -0.7
PHRF1-203ENST00000416188 IGLV5-45A0A087WSX0 123 aa10.66□□□□□ -0.7
PHRF1-203ENST00000416188 HCG22E2RYF7 251 aa10.66□□□□□ -0.7
PHRF1-203ENST00000416188 MKI67P46013 3256 aaKnown RBP10.65□□□□□ -0.7
PHRF1-203ENST00000416188 SPINK1P00995 79 aa10.65□□□□□ -0.71
PHRF1-203ENST00000416188 C1orf195Q5TG92 126 aa10.63□□□□□ -0.71
PHRF1-203ENST00000416188 FAM218AQ96MZ4 157 aa10.63□□□□□ -0.71
PHRF1-203ENST00000416188 A0A0C4DFX4 3053 aa10.61□□□□□ -0.71
PHRF1-203ENST00000416188 PSPHP1O15172 72 aa10.61□□□□□ -0.71
PHRF1-203ENST00000416188 CXCL6P80162 114 aa10.6□□□□□ -0.71
PHRF1-203ENST00000416188 TRANK1O15050 2925 aa10.59□□□□□ -0.71
PHRF1-203ENST00000416188 TM2D3Q9BRN9 247 aa10.58□□□□□ -0.72
PHRF1-203ENST00000416188 J3QL48 77 aa10.57□□□□□ -0.72
PHRF1-203ENST00000416188 SMIM29Q86T20 159 aa10.57□□□□□ -0.72
PHRF1-203ENST00000416188 CSNK1G2-AS1Q8NCQ2 148 aa10.56□□□□□ -0.72
PHRF1-203ENST00000416188 C1orf64Q8NEQ6 169 aa10.56□□□□□ -0.72
PHRF1-203ENST00000416188 PMAIP1Q13794 54 aa10.56□□□□□ -0.72
PHRF1-203ENST00000416188 MOBPQ13875 183 aa10.56□□□□□ -0.72
PHRF1-203ENST00000416188 LIMD2Q9BT23 127 aa10.55□□□□□ -0.72
PHRF1-203ENST00000416188 PLA2G1BP04054 148 aaKnown RBP10.54□□□□□ -0.72
PHRF1-203ENST00000416188 DNAH10OSP0CZ25 163 aa10.54□□□□□ -0.72
PHRF1-203ENST00000416188 IGKV2D-30A0A075B6S6 120 aa10.54□□□□□ -0.72
PHRF1-203ENST00000416188 IGKV2-30P06310 120 aa10.54□□□□□ -0.72
PHRF1-203ENST00000416188 ELOF1P60002 83 aaKnown RBP10.54□□□□□ -0.72
PHRF1-203ENST00000416188 BPTFQ12830 3046 aa10.53□□□□□ -0.72
PHRF1-203ENST00000416188 hDV103S1A0JD37 113 aa10.53□□□□□ -0.72
PHRF1-203ENST00000416188 BRCA2P51587 3418 aa10.53□□□□□ -0.72
PHRF1-203ENST00000416188 PHF5AQ7RTV0 110 aaKnown RBP10.53□□□□□ -0.72
PHRF1-203ENST00000416188 SPACA4Q8TDM5 124 aa10.53□□□□□ -0.72
PHRF1-203ENST00000416188 CRYGAP11844 174 aa10.53□□□□□ -0.72
PHRF1-203ENST00000416188 Q6ZRP5 223 aa10.51□□□□□ -0.73
PHRF1-203ENST00000416188 Q6ZRX8 168 aa10.5□□□□□ -0.73
PHRF1-203ENST00000416188 ST20-AS1Q8NBB2 130 aa10.48□□□□□ -0.73
PHRF1-203ENST00000416188 LINC00476Q8WZB0 136 aa10.48□□□□□ -0.73
PHRF1-203ENST00000416188 Q6ZQT0 140 aa10.47□□□□□ -0.73
PHRF1-203ENST00000416188 Q8NBF4 154 aa10.47□□□□□ -0.73
PHRF1-203ENST00000416188 PRUNE2Q8WUY3 3088 aa10.47□□□□□ -0.73
PHRF1-203ENST00000416188 MGAQ8IWI9 3026 aa10.47□□□□□ -0.73
PHRF1-203ENST00000416188 STAB1Q9NY15 2570 aa10.46□□□□□ -0.73
PHRF1-203ENST00000416188 CHTF8P0CG12 524 aa10.46□□□□□ -0.73
PHRF1-203ENST00000416188 EPM2AB3EWF7 344 aa10.46□□□□□ -0.74
PHRF1-203ENST00000416188 GIG44P09565 113 aaPredicted RBP10.45□□□□□ -0.74
PHRF1-203ENST00000416188 LITAFQ99732 161 aa10.45□□□□□ -0.74
PHRF1-203ENST00000416188 RPL37AP61513 92 aaKnown RBP10.45□□□□□ -0.74
PHRF1-203ENST00000416188 LINC00336Q6ZUF6 198 aa10.44□□□□□ -0.74
PHRF1-203ENST00000416188 UNC79Q9P2D8 2635 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms