RNA–Protein interactions for RNA: ENST00000416123.6

COL12A1-203, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 8,964 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-203ENST00000416123 Q6Q795 121 aa7.38□□□□□ -1.23
COL12A1-203ENST00000416123 SMCR5Q8TEV8 140 aa7.38□□□□□ -1.23
COL12A1-203ENST00000416123 IMUPQ9GZP8 106 aa7.38□□□□□ -1.23
COL12A1-203ENST00000416123 LINC00337Q8N6G1 96 aa7.37□□□□□ -1.23
COL12A1-203ENST00000416123 Q6JHZ5 121 aa7.37□□□□□ -1.23
COL12A1-203ENST00000416123 KIF25-AS1Q9Y6Z4 181 aa7.37□□□□□ -1.23
COL12A1-203ENST00000416123 COX7CP15954 63 aa7.36□□□□□ -1.23
COL12A1-203ENST00000416123 DNAH14Q0VDD8 3507 aa7.36□□□□□ -1.23
COL12A1-203ENST00000416123 FASNP49327 2511 aaKnown RBP7.36□□□□□ -1.23
COL12A1-203ENST00000416123 FAM19A4Q96LR4 140 aa7.35□□□□□ -1.23
COL12A1-203ENST00000416123 KIAA0087Q14695 138 aa7.34□□□□□ -1.23
COL12A1-203ENST00000416123 SPACA4Q8TDM5 124 aa7.34□□□□□ -1.23
COL12A1-203ENST00000416123 TRBV7-6A0A0J9YX20 115 aa7.34□□□□□ -1.23
COL12A1-203ENST00000416123 F8WDY8 70 aa7.34□□□□□ -1.23
COL12A1-203ENST00000416123 MOBPQ13875 183 aa7.34□□□□□ -1.23
COL12A1-203ENST00000416123 PHF5AQ7RTV0 110 aaKnown RBP7.34□□□□□ -1.23
COL12A1-203ENST00000416123 CELSR3Q9NYQ7 3312 aa7.34□□□□□ -1.23
COL12A1-203ENST00000416123 C6orf48Q9UBA6 75 aa7.34□□□□□ -1.23
COL12A1-203ENST00000416123 LINC00315P59091 139 aa7.33□□□□□ -1.24
COL12A1-203ENST00000416123 H0Y9P7 68 aa7.33□□□□□ -1.24
COL12A1-203ENST00000416123 TRAV7A0A075B6U4 112 aa7.32□□□□□ -1.24
COL12A1-203ENST00000416123 HCG22E2RYF7 251 aa7.32□□□□□ -1.24
COL12A1-203ENST00000416123 SOSTDC1Q6X4U4 206 aa7.32□□□□□ -1.24
COL12A1-203ENST00000416123 LINC01561Q8N1V8 128 aa7.32□□□□□ -1.24
COL12A1-203ENST00000416123 VPREB1P12018 145 aa7.32□□□□□ -1.24
COL12A1-203ENST00000416123 LINC00167Q96N53 147 aa7.32□□□□□ -1.24
COL12A1-203ENST00000416123 F8P00451 2351 aa7.31□□□□□ -1.24
COL12A1-203ENST00000416123 HTTP42858 3142 aa7.31□□□□□ -1.24
COL12A1-203ENST00000416123 RANBP2P49792 3224 aaKnown RBP7.31□□□□□ -1.24
COL12A1-203ENST00000416123 IGHV3OR16-9A0A0B4J2B5 98 aa7.3□□□□□ -1.24
COL12A1-203ENST00000416123 IGKV2D-30A0A075B6S6 120 aa7.3□□□□□ -1.24
COL12A1-203ENST00000416123 RTL8CO15255 209 aa7.3□□□□□ -1.24
COL12A1-203ENST00000416123 IGKV2-30P06310 120 aa7.3□□□□□ -1.24
COL12A1-203ENST00000416123 C16orf90A8MZG2 172 aa7.29□□□□□ -1.24
COL12A1-203ENST00000416123 LINC00588Q9Y4M8 146 aa7.29□□□□□ -1.24
COL12A1-203ENST00000416123 LIMD2Q9BT23 127 aa7.29□□□□□ -1.24
COL12A1-203ENST00000416123 Q8NAQ8 132 aa7.29□□□□□ -1.24
COL12A1-203ENST00000416123 LINC00846Q9NV44 126 aa7.29□□□□□ -1.24
COL12A1-203ENST00000416123 CR1P17927 2039 aa7.28□□□□□ -1.24
COL12A1-203ENST00000416123 IGLV5-39A0A0G2JS06 123 aa7.26□□□□□ -1.25
COL12A1-203ENST00000416123 LINC01546A6NGU7 62 aa7.26□□□□□ -1.25
COL12A1-203ENST00000416123 NBDYA0A0U1RRE5 68 aa7.26□□□□□ -1.25
COL12A1-203ENST00000416123 FAM168BA1KXE4 195 aa7.25□□□□□ -1.25
COL12A1-203ENST00000416123 FAM229AH3BQW9 127 aa7.25□□□□□ -1.25
COL12A1-203ENST00000416123 CRYGAP11844 174 aa7.25□□□□□ -1.25
COL12A1-203ENST00000416123 KRTAP10-11P60412 298 aa7.25□□□□□ -1.25
COL12A1-203ENST00000416123 UNC80Q8N2C7 3258 aa7.25□□□□□ -1.25
COL12A1-203ENST00000416123 PSPHP1O15172 72 aa7.25□□□□□ -1.25
COL12A1-203ENST00000416123 TRBV7-7A0A0K0K1E9 115 aa7.24□□□□□ -1.25
COL12A1-203ENST00000416123 C7orf65Q6ZTY9 151 aa7.24□□□□□ -1.25
COL12A1-203ENST00000416123 SPATA3Q8NHX4 192 aa7.24□□□□□ -1.25
COL12A1-203ENST00000416123 SMIM29Q86T20 159 aa7.24□□□□□ -1.25
COL12A1-203ENST00000416123 FAM218AQ96MZ4 157 aa7.23□□□□□ -1.25
COL12A1-203ENST00000416123 A0A0C4DFX4 3053 aa7.23□□□□□ -1.25
COL12A1-203ENST00000416123 TYMSOSQ8TAI1 123 aa7.23□□□□□ -1.25
COL12A1-203ENST00000416123 TRIOO75962 3097 aa7.23□□□□□ -1.25
COL12A1-203ENST00000416123 ST20-AS1Q8NBB2 130 aa7.22□□□□□ -1.25
COL12A1-203ENST00000416123 EPM2AB3EWF7 344 aa7.22□□□□□ -1.25
COL12A1-203ENST00000416123 H3BNG1 76 aa7.22□□□□□ -1.25
COL12A1-203ENST00000416123 SZT2Q5T011 3432 aa7.21□□□□□ -1.26
COL12A1-203ENST00000416123 C1orf64Q8NEQ6 169 aa7.21□□□□□ -1.26
COL12A1-203ENST00000416123 RPL37AP61513 92 aaKnown RBP7.2□□□□□ -1.26
COL12A1-203ENST00000416123 Q6ZRP5 223 aa7.2□□□□□ -1.26
COL12A1-203ENST00000416123 KRTAP10-3P60369 221 aa7.2□□□□□ -1.26
COL12A1-203ENST00000416123 SERTAD4-AS1Q5TG53 156 aa7.19□□□□□ -1.26
COL12A1-203ENST00000416123 USP24Q9UPU5 2620 aa7.19□□□□□ -1.26
COL12A1-203ENST00000416123 LINC00476Q8WZB0 136 aa7.19□□□□□ -1.26
COL12A1-203ENST00000416123 WWC2-AS2Q96NR7 200 aa7.18□□□□□ -1.26
COL12A1-203ENST00000416123 ELOF1P60002 83 aaKnown RBP7.18□□□□□ -1.26
COL12A1-203ENST00000416123 C1orf195Q5TG92 126 aa7.18□□□□□ -1.26
COL12A1-203ENST00000416123 PMAIP1Q13794 54 aa7.18□□□□□ -1.26
COL12A1-203ENST00000416123 hDV103S1A0JD37 113 aa7.18□□□□□ -1.26
COL12A1-203ENST00000416123 K7EIL1 84 aa7.18□□□□□ -1.26
COL12A1-203ENST00000416123 CXCL6P80162 114 aa7.18□□□□□ -1.26
COL12A1-203ENST00000416123 IGLV5-45A0A087WSX0 123 aa7.17□□□□□ -1.26
COL12A1-203ENST00000416123 SMIM26A0A096LP01 95 aa7.17□□□□□ -1.26
COL12A1-203ENST00000416123 TMEM254Q8TBM7 123 aa7.17□□□□□ -1.26
COL12A1-203ENST00000416123 DNAH10OSP0CZ25 163 aa7.17□□□□□ -1.26
COL12A1-203ENST00000416123 Q6ZRX8 168 aa7.17□□□□□ -1.26
COL12A1-203ENST00000416123 LINC00313P59037 77 aa7.16□□□□□ -1.26
COL12A1-203ENST00000416123 CSNK1G2-AS1Q8NCQ2 148 aa7.15□□□□□ -1.27
COL12A1-203ENST00000416123 GVQW2A0A096LPI5 108 aaPredicted RBP7.14□□□□□ -1.27
COL12A1-203ENST00000416123 Q96NJ1 140 aa7.14□□□□□ -1.27
COL12A1-203ENST00000416123 BCE1O60756 84 aa7.13□□□□□ -1.27
COL12A1-203ENST00000416123 SPINT4Q6UDR6 99 aa7.13□□□□□ -1.27
COL12A1-203ENST00000416123 CDIP1Q9H305 208 aa7.13□□□□□ -1.27
COL12A1-203ENST00000416123 SMCPP49901 116 aaPredicted RBP7.12□□□□□ -1.27
COL12A1-203ENST00000416123 J3QL48 77 aa7.12□□□□□ -1.27
COL12A1-203ENST00000416123 Q8NBF4 154 aa7.11□□□□□ -1.27
COL12A1-203ENST00000416123 Q6ZQT0 140 aa7.11□□□□□ -1.27
COL12A1-203ENST00000416123 VPS13AQ96RL7 3174 aa7.11□□□□□ -1.27
COL12A1-203ENST00000416123 SMR3BP02814 79 aaPredicted RBP7.1□□□□□ -1.27
COL12A1-203ENST00000416123 ACYP2P14621 99 aa7.1□□□□□ -1.27
COL12A1-203ENST00000416123 WDFY4Q6ZS81 3184 aa7.1□□□□□ -1.27
COL12A1-203ENST00000416123 MGAQ8IWI9 3026 aa7.1□□□□□ -1.27
COL12A1-203ENST00000416123 IGLV8-61A0A075B6I0 122 aa7.09□□□□□ -1.27
COL12A1-203ENST00000416123 A0A096LNT2 108 aa7.09□□□□□ -1.27
COL12A1-203ENST00000416123 SPAG11AQ6PDA7 123 aa7.08□□□□□ -1.28
COL12A1-203ENST00000416123 EPG5Q9HCE0 2579 aa7.08□□□□□ -1.28
COL12A1-203ENST00000416123 CHD9Q3L8U1 2897 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms