RNA–Protein interactions for RNA: ENST00000414861.6

RIF1-202, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-202ENST00000414861 C9orf129Q5T035 196 aaKnown RBP6.21□□□□□ -1.42
RIF1-202ENST00000414861 A4D1N5 150 aa6.21□□□□□ -1.42
RIF1-202ENST00000414861 IFITM1P13164 125 aa6.21□□□□□ -1.42
RIF1-202ENST00000414861 GAGE2BQ13066 116 aa6.21□□□□□ -1.42
RIF1-202ENST00000414861 BATFQ16520 125 aa6.21□□□□□ -1.42
RIF1-202ENST00000414861 IGLV5-52A0A0A0MRZ9 124 aa6.2□□□□□ -1.42
RIF1-202ENST00000414861 CHTF8P0CG12 524 aa6.2□□□□□ -1.42
RIF1-202ENST00000414861 SNHG12Q9BXW3 62 aa6.2□□□□□ -1.42
RIF1-202ENST00000414861 IGKV2-24A0A0C4DH68 120 aa6.2□□□□□ -1.42
RIF1-202ENST00000414861 LOC107984156A0A0G2JMH3 177 aa6.2□□□□□ -1.42
RIF1-202ENST00000414861 SDIM1Q6ZPB5 146 aa6.2□□□□□ -1.42
RIF1-202ENST00000414861 ARL17AQ8IVW1 177 aa6.2□□□□□ -1.42
RIF1-202ENST00000414861 LINC00336Q6ZUF6 198 aa6.19□□□□□ -1.42
RIF1-202ENST00000414861 FAM168BA1KXE4 195 aa6.19□□□□□ -1.42
RIF1-202ENST00000414861 PANO1I0J062 215 aa6.19□□□□□ -1.42
RIF1-202ENST00000414861 M0R143 59 aa6.19□□□□□ -1.42
RIF1-202ENST00000414861 RPL24P83731 157 aaKnown RBP6.19□□□□□ -1.42
RIF1-202ENST00000414861 C16orf90A8MZG2 172 aa6.18□□□□□ -1.42
RIF1-202ENST00000414861 K7ERJ3 54 aa6.18□□□□□ -1.42
RIF1-202ENST00000414861 PRR3P79522 188 aaKnown RBP6.18□□□□□ -1.42
RIF1-202ENST00000414861 IGKV2-28A0A075B6P5 120 aa6.18□□□□□ -1.42
RIF1-202ENST00000414861 IGKV2D-28P01615 120 aa6.18□□□□□ -1.42
RIF1-202ENST00000414861 PPDPFQ9H3Y8 114 aa6.18□□□□□ -1.42
RIF1-202ENST00000414861 NHP2Q9NX24 153 aaKnown RBP6.18□□□□□ -1.42
RIF1-202ENST00000414861 A0A1B0GVY2 172 aa6.17□□□□□ -1.42
RIF1-202ENST00000414861 CFC1BP0CG36 223 aa6.17□□□□□ -1.42
RIF1-202ENST00000414861 CFC1P0CG37 223 aa6.17□□□□□ -1.42
RIF1-202ENST00000414861 SERTAD4-AS1Q5TG53 156 aa6.17□□□□□ -1.42
RIF1-202ENST00000414861 KRTAP7-1Q8IUC3 87 aa6.17□□□□□ -1.42
RIF1-202ENST00000414861 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.17□□□□□ -1.42
RIF1-202ENST00000414861 COPS9Q8WXC6 57 aa6.17□□□□□ -1.42
RIF1-202ENST00000414861 TMEM238LA0A1B0GVL6 79 aa6.16□□□□□ -1.42
RIF1-202ENST00000414861 A6NJY4 79 aa6.16□□□□□ -1.42
RIF1-202ENST00000414861 NCR3O14931 201 aa6.16□□□□□ -1.42
RIF1-202ENST00000414861 VPREB1P12018 145 aa6.16□□□□□ -1.42
RIF1-202ENST00000414861 LINC00337Q8N6G1 96 aa6.16□□□□□ -1.42
RIF1-202ENST00000414861 DNAH8Q96JB1 4490 aa6.15□□□□□ -1.42
RIF1-202ENST00000414861 PGPEP1Q9NXJ5 209 aa6.15□□□□□ -1.42
RIF1-202ENST00000414861 LRP1BQ9NZR2 4599 aa6.15□□□□□ -1.43
RIF1-202ENST00000414861 A0A1B0GWB2 263 aa6.15□□□□□ -1.43
RIF1-202ENST00000414861 A0A1W2PNN7 141 aa6.15□□□□□ -1.43
RIF1-202ENST00000414861 NDUFC2O95298 119 aa6.15□□□□□ -1.43
RIF1-202ENST00000414861 FAM19A5Q7Z5A7 132 aaPredicted RBP6.15□□□□□ -1.43
RIF1-202ENST00000414861 KRTAP10-1P60331 282 aa6.14□□□□□ -1.43
RIF1-202ENST00000414861 SPACA4Q8TDM5 124 aa6.14□□□□□ -1.43
RIF1-202ENST00000414861 DYNC1H1Q14204 4646 aaKnown RBP6.14□□□□□ -1.43
RIF1-202ENST00000414861 A0A0B4J2C4 111 aa6.14□□□□□ -1.43
RIF1-202ENST00000414861 PKIGQ9Y2B9 76 aa6.14□□□□□ -1.43
RIF1-202ENST00000414861 A6NDN8 102 aa6.13□□□□□ -1.43
RIF1-202ENST00000414861 PLA2G2DQ9UNK4 145 aa6.13□□□□□ -1.43
RIF1-202ENST00000414861 FAM30AQ9NZY2 134 aa6.13□□□□□ -1.43
RIF1-202ENST00000414861 RAB37Q96AX2 223 aa6.12□□□□□ -1.43
RIF1-202ENST00000414861 GAGE10A6NGK3 116 aa6.11□□□□□ -1.43
RIF1-202ENST00000414861 RPL13AP40429 203 aaKnown RBP6.11□□□□□ -1.43
RIF1-202ENST00000414861 LINC00474Q9P2X8 69 aa6.11□□□□□ -1.43
RIF1-202ENST00000414861 IGLV5-37A0A075B6J1 123 aa6.11□□□□□ -1.43
RIF1-202ENST00000414861 H7C2G1 150 aa6.11□□□□□ -1.43
RIF1-202ENST00000414861 NKAPP1Q8N9T2 125 aa6.11□□□□□ -1.43
RIF1-202ENST00000414861 C7orf33Q8WU49 177 aa6.11□□□□□ -1.43
RIF1-202ENST00000414861 PRO1854Q9UHT4 67 aa6.11□□□□□ -1.43
RIF1-202ENST00000414861 A0A087WYN8 130 aa6.1□□□□□ -1.43
RIF1-202ENST00000414861 TRBV10-2A0A0K0K1G8 114 aa6.1□□□□□ -1.43
RIF1-202ENST00000414861 M0QXV9 152 aa6.1□□□□□ -1.43
RIF1-202ENST00000414861 NAA38Q9BRA0 125 aaKnown RBP6.1□□□□□ -1.43
RIF1-202ENST00000414861 C22orf24Q9Y442 160 aa6.1□□□□□ -1.43
RIF1-202ENST00000414861 TAX1BP3O14907 124 aa6.1□□□□□ -1.43
RIF1-202ENST00000414861 COL5A1-AS1Q5SY13 56 aa6.1□□□□□ -1.43
RIF1-202ENST00000414861 Q6ZSA8 131 aa6.1□□□□□ -1.43
RIF1-202ENST00000414861 OR13C6PQ8NH95 151 aa6.1□□□□□ -1.43
RIF1-202ENST00000414861 TRAV13-2A0A0B4J235 113 aa6.09□□□□□ -1.43
RIF1-202ENST00000414861 TRBV10-3A0A0K0K1G6 114 aa6.09□□□□□ -1.43
RIF1-202ENST00000414861 M0R378 163 aa6.09□□□□□ -1.43
RIF1-202ENST00000414861 TSPAN13O95857 204 aa6.09□□□□□ -1.43
RIF1-202ENST00000414861 HAMPP81172 84 aa6.09□□□□□ -1.43
RIF1-202ENST00000414861 IGLV6-57P01721 117 aa6.09□□□□□ -1.43
RIF1-202ENST00000414861 MRPL55Q7Z7F7 128 aaKnown RBP6.09□□□□□ -1.43
RIF1-202ENST00000414861 DPH3Q96FX2 82 aa6.09□□□□□ -1.43
RIF1-202ENST00000414861 S100A7L2Q5SY68 101 aa6.08□□□□□ -1.44
RIF1-202ENST00000414861 PHF5AQ7RTV0 110 aaKnown RBP6.08□□□□□ -1.44
RIF1-202ENST00000414861 LINC00167Q96N53 147 aa6.08□□□□□ -1.44
RIF1-202ENST00000414861 RPL37AP8A6NKH3 93 aa6.08□□□□□ -1.44
RIF1-202ENST00000414861 EPM2AB3EWF7 344 aa6.08□□□□□ -1.44
RIF1-202ENST00000414861 KRTAP11-1Q8IUC1 163 aa6.07□□□□□ -1.44
RIF1-202ENST00000414861 TMEM126AQ9H061 195 aa6.07□□□□□ -1.44
RIF1-202ENST00000414861 PLAC8Q9NZF1 115 aa6.07□□□□□ -1.44
RIF1-202ENST00000414861 Q1RN00 199 aa6.07□□□□□ -1.44
RIF1-202ENST00000414861 SCXQ7RTU7 201 aa6.07□□□□□ -1.44
RIF1-202ENST00000414861 SMIM11BQ8TCY0 68 aa6.07□□□□□ -1.44
RIF1-202ENST00000414861 APOBP04114 4563 aaKnown RBP6.07□□□□□ -1.44
RIF1-202ENST00000414861 EPPK1P58107 5090 aaKnown RBP6.07□□□□□ -1.44
RIF1-202ENST00000414861 CIRBP-AS1Q8TBR5 109 aa6.06□□□□□ -1.44
RIF1-202ENST00000414861 IGLV1-50A0A075B6I6 118 aa6.05□□□□□ -1.44
RIF1-202ENST00000414861 H3BUT2 72 aa6.05□□□□□ -1.44
RIF1-202ENST00000414861 TRAV23DV6A0A075B6W5 121 aa6.05□□□□□ -1.44
RIF1-202ENST00000414861 C9orf118A6NHY6 69 aa6.05□□□□□ -1.44
RIF1-202ENST00000414861 TRIAP1O43715 76 aa6.05□□□□□ -1.44
RIF1-202ENST00000414861 LBHQ53QV2 105 aaPredicted RBP6.04□□□□□ -1.44
RIF1-202ENST00000414861 KCNQ1DNQ9H478 68 aa6.04□□□□□ -1.44
RIF1-202ENST00000414861 RPL28P46779 137 aaKnown RBP6.03□□□□□ -1.44
RIF1-202ENST00000414861 C6orf99Q4VX62 202 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms