RNA–Protein interactions for RNA: ENST00000414057.6

SCAMP4-204, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 1 (best)

Gene SCAMP4, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-204ENST00000414057 C2orf82Q6UX34 121 aa11□□□□□ -0.65
SCAMP4-204ENST00000414057 ERG28Q9UKR5 140 aa11□□□□□ -0.65
SCAMP4-204ENST00000414057 ADAMTSL4-AS1Q5T5F5 129 aa10.99□□□□□ -0.65
SCAMP4-204ENST00000414057 DNAH8Q96JB1 4490 aa10.98□□□□□ -0.65
SCAMP4-204ENST00000414057 VPS13BQ7Z7G8 4022 aa10.98□□□□□ -0.65
SCAMP4-204ENST00000414057 TRBV30A0A0K0K1B3 111 aa10.98□□□□□ -0.65
SCAMP4-204ENST00000414057 SMIM13P0DJ93 91 aa10.98□□□□□ -0.65
SCAMP4-204ENST00000414057 FXYD2P54710 66 aa10.98□□□□□ -0.65
SCAMP4-204ENST00000414057 USP17L23D6RBM5 183 aa10.96□□□□□ -0.65
SCAMP4-204ENST00000414057 LINC00158P58513 81 aa10.96□□□□□ -0.65
SCAMP4-204ENST00000414057 HIGD2BQ4VC39 106 aa10.96□□□□□ -0.65
SCAMP4-204ENST00000414057 MUSTN1Q8IVN3 82 aa10.96□□□□□ -0.65
SCAMP4-204ENST00000414057 CAMK2N2Q96S95 79 aa10.96□□□□□ -0.65
SCAMP4-204ENST00000414057 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.94□□□□□ -0.66
SCAMP4-204ENST00000414057 LINC01620Q4KN68 170 aa10.94□□□□□ -0.66
SCAMP4-204ENST00000414057 UNQ6190/PRO20217Q6UXQ8 127 aa10.94□□□□□ -0.66
SCAMP4-204ENST00000414057 LINC00528Q8N1L1 170 aa10.94□□□□□ -0.66
SCAMP4-204ENST00000414057 LINC00308Q8TCZ7 52 aa10.94□□□□□ -0.66
SCAMP4-204ENST00000414057 A0A1B0GWB2 263 aa10.93□□□□□ -0.66
SCAMP4-204ENST00000414057 PFN2P35080 140 aa10.93□□□□□ -0.66
SCAMP4-204ENST00000414057 MIR7-3HGQ8N6C7 128 aa10.93□□□□□ -0.66
SCAMP4-204ENST00000414057 A0A0U1RRA0 63 aa10.93□□□□□ -0.66
SCAMP4-204ENST00000414057 C10orf25Q5T742 122 aa10.93□□□□□ -0.66
SCAMP4-204ENST00000414057 SCXQ7RTU7 201 aa10.93□□□□□ -0.66
SCAMP4-204ENST00000414057 DAND5Q8N907 189 aa10.93□□□□□ -0.66
SCAMP4-204ENST00000414057 LINC00526Q96FQ7 95 aa10.93□□□□□ -0.66
SCAMP4-204ENST00000414057 NHP2Q9NX24 153 aaKnown RBP10.93□□□□□ -0.66
SCAMP4-204ENST00000414057 SYCNQ0VAF6 134 aa10.92□□□□□ -0.66
SCAMP4-204ENST00000414057 RNF151Q2KHN1 245 aa10.92□□□□□ -0.66
SCAMP4-204ENST00000414057 A4D1N5 150 aa10.91□□□□□ -0.66
SCAMP4-204ENST00000414057 C6orf48Q9UBA6 75 aa10.91□□□□□ -0.66
SCAMP4-204ENST00000414057 LOC107984156A0A0G2JMH3 177 aa10.9□□□□□ -0.66
SCAMP4-204ENST00000414057 Q6ZRU5 148 aa10.9□□□□□ -0.66
SCAMP4-204ENST00000414057 ARL17AQ8IVW1 177 aa10.9□□□□□ -0.66
SCAMP4-204ENST00000414057 A0A0B4J2C4 111 aa10.89□□□□□ -0.67
SCAMP4-204ENST00000414057 NPC2P61916 151 aa10.88□□□□□ -0.67
SCAMP4-204ENST00000414057 CARD19Q96LW7 228 aa10.88□□□□□ -0.67
SCAMP4-204ENST00000414057 C9orf116Q5BN46 136 aaPredicted RBP10.87□□□□□ -0.67
SCAMP4-204ENST00000414057 SOSTDC1Q6X4U4 206 aa10.87□□□□□ -0.67
SCAMP4-204ENST00000414057 CIRBP-AS1Q8TBR5 109 aa10.87□□□□□ -0.67
SCAMP4-204ENST00000414057 J3QL48 77 aa10.87□□□□□ -0.67
SCAMP4-204ENST00000414057 CFC1BP0CG36 223 aa10.87□□□□□ -0.67
SCAMP4-204ENST00000414057 CFC1P0CG37 223 aa10.87□□□□□ -0.67
SCAMP4-204ENST00000414057 NDUFC2-KCTD14E9PQ53 114 aa10.86□□□□□ -0.67
SCAMP4-204ENST00000414057 TAX1BP3O14907 124 aa10.86□□□□□ -0.67
SCAMP4-204ENST00000414057 C9orf163Q8N9P6 203 aa10.86□□□□□ -0.67
SCAMP4-204ENST00000414057 RAB37Q96AX2 223 aa10.86□□□□□ -0.67
SCAMP4-204ENST00000414057 SRRM2Q9UQ35 2752 aaKnown RBP10.85□□□□□ -0.67
SCAMP4-204ENST00000414057 TLX1NBP0CAT3 122 aa10.85□□□□□ -0.67
SCAMP4-204ENST00000414057 CNBPP62633 177 aaKnown RBP10.85□□□□□ -0.67
SCAMP4-204ENST00000414057 SND1-IT1Q9HBX3 110 aa10.85□□□□□ -0.67
SCAMP4-204ENST00000414057 PRO1854Q9UHT4 67 aa10.85□□□□□ -0.67
SCAMP4-204ENST00000414057 HERC1Q15751 4861 aa10.84□□□□□ -0.67
SCAMP4-204ENST00000414057 EIF4EBP3O60516 100 aaPredicted RBP10.84□□□□□ -0.67
SCAMP4-204ENST00000414057 MYCBP2O75592 4640 aa10.84□□□□□ -0.67
SCAMP4-204ENST00000414057 K7ERJ3 54 aa10.83□□□□□ -0.68
SCAMP4-204ENST00000414057 NDUFC2O95298 119 aa10.83□□□□□ -0.68
SCAMP4-204ENST00000414057 C9orf118A6NHY6 69 aa10.82□□□□□ -0.68
SCAMP4-204ENST00000414057 SLPIP03973 132 aa10.81□□□□□ -0.68
SCAMP4-204ENST00000414057 PKIGQ9Y2B9 76 aa10.81□□□□□ -0.68
SCAMP4-204ENST00000414057 DMBT1Q9UGM3 2413 aaPredicted RBP10.81□□□□□ -0.68
SCAMP4-204ENST00000414057 TRAV13-2A0A0B4J235 113 aa10.8□□□□□ -0.68
SCAMP4-204ENST00000414057 KRTAP29-1A8MX34 341 aaPredicted RBP10.8□□□□□ -0.68
SCAMP4-204ENST00000414057 FLG2Q5D862 2391 aaPredicted RBP10.79□□□□□ -0.68
SCAMP4-204ENST00000414057 LOC107984640A0A0U1RRK4 108 aa10.78□□□□□ -0.68
SCAMP4-204ENST00000414057 SDIM1Q6ZPB5 146 aa10.78□□□□□ -0.68
SCAMP4-204ENST00000414057 Q6ZRP5 223 aa10.77□□□□□ -0.69
SCAMP4-204ENST00000414057 H3BUT2 72 aa10.76□□□□□ -0.69
SCAMP4-204ENST00000414057 RPL37AP61513 92 aaKnown RBP10.76□□□□□ -0.69
SCAMP4-204ENST00000414057 IGKV2-28A0A075B6P5 120 aa10.75□□□□□ -0.69
SCAMP4-204ENST00000414057 TSPAN13O95857 204 aa10.75□□□□□ -0.69
SCAMP4-204ENST00000414057 IGKV2D-28P01615 120 aa10.75□□□□□ -0.69
SCAMP4-204ENST00000414057 RPL18AQ02543 176 aaKnown RBP10.75□□□□□ -0.69
SCAMP4-204ENST00000414057 DPH3Q96FX2 82 aa10.75□□□□□ -0.69
SCAMP4-204ENST00000414057 TRBV10-2A0A0K0K1G8 114 aa10.74□□□□□ -0.69
SCAMP4-204ENST00000414057 RPL13AP40429 203 aaKnown RBP10.74□□□□□ -0.69
SCAMP4-204ENST00000414057 KRTAP10-4P60372 401 aaPredicted RBP10.74□□□□□ -0.69
SCAMP4-204ENST00000414057 GAGE2EQ4V326 116 aa10.74□□□□□ -0.69
SCAMP4-204ENST00000414057 LYRM7Q5U5X0 104 aa10.74□□□□□ -0.69
SCAMP4-204ENST00000414057 XAGE1AQ9HD64 81 aa10.74□□□□□ -0.69
SCAMP4-204ENST00000414057 GAGE2DQ9UEU5 116 aa10.74□□□□□ -0.69
SCAMP4-204ENST00000414057 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.74□□□□□ -0.69
SCAMP4-204ENST00000414057 A0A1B0GV90 55 aa10.74□□□□□ -0.69
SCAMP4-204ENST00000414057 A0A1W2PPM0 123 aa10.74□□□□□ -0.69
SCAMP4-204ENST00000414057 OXTP01178 125 aa10.74□□□□□ -0.69
SCAMP4-204ENST00000414057 Q1RN00 199 aa10.74□□□□□ -0.69
SCAMP4-204ENST00000414057 FABP2P12104 132 aa10.73□□□□□ -0.69
SCAMP4-204ENST00000414057 LINC00337Q8N6G1 96 aa10.73□□□□□ -0.69
SCAMP4-204ENST00000414057 PLA2G2DQ9UNK4 145 aa10.73□□□□□ -0.69
SCAMP4-204ENST00000414057 TMEM126AQ9H061 195 aa10.71□□□□□ -0.69
SCAMP4-204ENST00000414057 C9orf129Q5T035 196 aaKnown RBP10.7□□□□□ -0.7
SCAMP4-204ENST00000414057 H7C2G1 150 aa10.69□□□□□ -0.7
SCAMP4-204ENST00000414057 PANO1I0J062 215 aa10.69□□□□□ -0.7
SCAMP4-204ENST00000414057 VPREB1P12018 145 aa10.69□□□□□ -0.7
SCAMP4-204ENST00000414057 NAA38Q9BRA0 125 aaKnown RBP10.69□□□□□ -0.7
SCAMP4-204ENST00000414057 COX6CP09669 75 aa10.68□□□□□ -0.7
SCAMP4-204ENST00000414057 PSMB2P49721 201 aa10.68□□□□□ -0.7
SCAMP4-204ENST00000414057 GAGE2BQ13066 116 aa10.68□□□□□ -0.7
SCAMP4-204ENST00000414057 VAMP3Q15836 100 aa10.68□□□□□ -0.7
SCAMP4-204ENST00000414057 OR13C6PQ8NH95 151 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms