RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 MRPS36P82909 103 aaKnown RBP1.53□□□□□ -2.16
HMGB1P11-201ENST00000413899 HSD52Q0P140 79 aa1.53□□□□□ -2.16
HMGB1P11-201ENST00000413899 JMJD1CQ15652 2540 aa1.53□□□□□ -2.16
HMGB1P11-201ENST00000413899 SMIM15Q7Z3B0 74 aa1.53□□□□□ -2.16
HMGB1P11-201ENST00000413899 FAM19A3Q7Z5A8 133 aa1.53□□□□□ -2.16
HMGB1P11-201ENST00000413899 C10orf126Q8N4M7 172 aa1.53□□□□□ -2.16
HMGB1P11-201ENST00000413899 Q8NAQ8 132 aa1.53□□□□□ -2.16
HMGB1P11-201ENST00000413899 TMEM141Q96I45 108 aa1.53□□□□□ -2.16
HMGB1P11-201ENST00000413899 SCGB3A1Q96QR1 104 aa1.53□□□□□ -2.16
HMGB1P11-201ENST00000413899 PRADC1Q9BSG0 188 aa1.53□□□□□ -2.16
HMGB1P11-201ENST00000413899 TMEM208Q9BTX3 173 aa1.53□□□□□ -2.16
HMGB1P11-201ENST00000413899 CST9LQ9H4G1 147 aa1.53□□□□□ -2.16
HMGB1P11-201ENST00000413899 CHTOPQ9Y3Y2 248 aaKnown RBP1.53□□□□□ -2.16
HMGB1P11-201ENST00000413899 VWFP04275 2813 aa1.53□□□□□ -2.17
HMGB1P11-201ENST00000413899 NF1P21359 2839 aa1.53□□□□□ -2.17
HMGB1P11-201ENST00000413899 BAHCC1Q9P281 2608 aa1.53□□□□□ -2.17
HMGB1P11-201ENST00000413899 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.52□□□□□ -2.17
HMGB1P11-201ENST00000413899 TRGV1A0A0A0MS02 117 aa1.52□□□□□ -2.17
HMGB1P11-201ENST00000413899 TRAV8-3A0A0A6YYJ7 113 aa1.52□□□□□ -2.17
HMGB1P11-201ENST00000413899 TRBV10-1A0A0K0K1A3 114 aa1.52□□□□□ -2.17
HMGB1P11-201ENST00000413899 IGKV2-29A2NJV5 120 aaPredicted RBP1.52□□□□□ -2.17
HMGB1P11-201ENST00000413899 I3L3M4 83 aa1.52□□□□□ -2.17
HMGB1P11-201ENST00000413899 K7ERS5 55 aa1.52□□□□□ -2.17
HMGB1P11-201ENST00000413899 CCL25O15444 150 aa1.52□□□□□ -2.17
HMGB1P11-201ENST00000413899 PSCAO43653 123 aa1.52□□□□□ -2.17
HMGB1P11-201ENST00000413899 PPP1R17O96001 155 aa1.52□□□□□ -2.17
HMGB1P11-201ENST00000413899 ZNF25P17030 456 aaPredicted RBP1.52□□□□□ -2.17
HMGB1P11-201ENST00000413899 PLNP26678 52 aa1.52□□□□□ -2.17
HMGB1P11-201ENST00000413899 G0S2P27469 103 aa1.52□□□□□ -2.17
HMGB1P11-201ENST00000413899 BATFQ16520 125 aa1.52□□□□□ -2.17
HMGB1P11-201ENST00000413899 TAL2Q16559 108 aa1.52□□□□□ -2.17
HMGB1P11-201ENST00000413899 TMEM97Q5BJF2 176 aa1.52□□□□□ -2.17
HMGB1P11-201ENST00000413899 COL5A1-AS1Q5SY13 56 aa1.52□□□□□ -2.17
HMGB1P11-201ENST00000413899 WFDC9Q8NEX5 89 aa1.52□□□□□ -2.17
HMGB1P11-201ENST00000413899 DNAJC30Q96LL9 226 aa1.52□□□□□ -2.17
HMGB1P11-201ENST00000413899 LINC01587Q99440 93 aa1.52□□□□□ -2.17
HMGB1P11-201ENST00000413899 NAA38Q9BRA0 125 aaKnown RBP1.52□□□□□ -2.17
HMGB1P11-201ENST00000413899 TIMM21Q9BVV7 248 aa1.52□□□□□ -2.17
HMGB1P11-201ENST00000413899 NOP10Q9NPE3 64 aaKnown RBP1.52□□□□□ -2.17
HMGB1P11-201ENST00000413899 TENM3Q9P273 2699 aa1.52□□□□□ -2.17
HMGB1P11-201ENST00000413899 MYMXA0A1B0GTQ4 84 aa1.51□□□□□ -2.17
HMGB1P11-201ENST00000413899 A0A1B0GU33 70 aa1.51□□□□□ -2.17
HMGB1P11-201ENST00000413899 TRBV6-4A0A1B0GX49 114 aa1.51□□□□□ -2.17
HMGB1P11-201ENST00000413899 LINC01549A6NIU2 74 aa1.51□□□□□ -2.17
HMGB1P11-201ENST00000413899 ZNF815PA8K554 130 aa1.51□□□□□ -2.17
HMGB1P11-201ENST00000413899 HSBP1L1C9JCN9 74 aa1.51□□□□□ -2.17
HMGB1P11-201ENST00000413899 C3orf84H3BNL1 204 aa1.51□□□□□ -2.17
HMGB1P11-201ENST00000413899 LEPROTO15243 131 aa1.51□□□□□ -2.17
HMGB1P11-201ENST00000413899 IGHV3-30P01768 117 aa1.51□□□□□ -2.17
HMGB1P11-201ENST00000413899 IGHV3-30-5P0DP03 117 aa1.51□□□□□ -2.17
HMGB1P11-201ENST00000413899 HTN1P15515 57 aa1.51□□□□□ -2.17
HMGB1P11-201ENST00000413899 INSL3P51460 131 aa1.51□□□□□ -2.17
HMGB1P11-201ENST00000413899 CRYBA4P53673 196 aa1.51□□□□□ -2.17
HMGB1P11-201ENST00000413899 SEC11AP67812 179 aa1.51□□□□□ -2.17
HMGB1P11-201ENST00000413899 COX6A2Q02221 97 aa1.51□□□□□ -2.17
HMGB1P11-201ENST00000413899 RRN3P1Q2M238 152 aa1.51□□□□□ -2.17
HMGB1P11-201ENST00000413899 DEFB135Q30KP9 77 aa1.51□□□□□ -2.17
HMGB1P11-201ENST00000413899 SOSTDC1Q6X4U4 206 aa1.51□□□□□ -2.17
HMGB1P11-201ENST00000413899 OR11H2Q8NH07 326 aa1.51□□□□□ -2.17
HMGB1P11-201ENST00000413899 ZNF625Q96I27 306 aaPredicted RBP1.51□□□□□ -2.17
HMGB1P11-201ENST00000413899 SPANXB1Q9NS25 103 aaPredicted RBP1.51□□□□□ -2.17
HMGB1P11-201ENST00000413899 SPANXA1Q9NS26 97 aa1.51□□□□□ -2.17
HMGB1P11-201ENST00000413899 MAP1AP78559 2803 aaPredicted RBP1.51□□□□□ -2.17
HMGB1P11-201ENST00000413899 DNAH3Q8TD57 4116 aa1.51□□□□□ -2.17
HMGB1P11-201ENST00000413899 TEP1Q99973 2627 aaKnown RBP1.5□□□□□ -2.17
HMGB1P11-201ENST00000413899 IGHV3-64A0A075B6Q5 118 aa1.5□□□□□ -2.17
HMGB1P11-201ENST00000413899 IGHV1-58A0A0C4DH39 117 aa1.5□□□□□ -2.17
HMGB1P11-201ENST00000413899 TINCRA0A1B0GVN0 87 aa1.5□□□□□ -2.17
HMGB1P11-201ENST00000413899 A0A1W2PNM2 257 aa1.5□□□□□ -2.17
HMGB1P11-201ENST00000413899 A0A1W2PPM0 123 aa1.5□□□□□ -2.17
HMGB1P11-201ENST00000413899 H3BRM9 83 aa1.5□□□□□ -2.17
HMGB1P11-201ENST00000413899 J3QQQ9 107 aa1.5□□□□□ -2.17
HMGB1P11-201ENST00000413899 K7EP34 96 aa1.5□□□□□ -2.17
HMGB1P11-201ENST00000413899 NDUFA1O15239 70 aa1.5□□□□□ -2.17
HMGB1P11-201ENST00000413899 DEFB4AO15263 64 aa1.5□□□□□ -2.17
HMGB1P11-201ENST00000413899 SPINK8P0C7L1 97 aa1.5□□□□□ -2.17
HMGB1P11-201ENST00000413899 IGHV3-30-3P0DP02 117 aa1.5□□□□□ -2.17
HMGB1P11-201ENST00000413899 COTL1Q14019 142 aa1.5□□□□□ -2.17
HMGB1P11-201ENST00000413899 KRTAP26-1Q6PEX3 210 aa1.5□□□□□ -2.17
HMGB1P11-201ENST00000413899 SPANXDQ9BXN6 97 aa1.5□□□□□ -2.17
HMGB1P11-201ENST00000413899 GTSF1LQ9H1H1 148 aa1.5□□□□□ -2.17
HMGB1P11-201ENST00000413899 CDC42SE2Q9NRR3 84 aa1.5□□□□□ -2.17
HMGB1P11-201ENST00000413899 SPANXCQ9NY87 97 aa1.5□□□□□ -2.17
HMGB1P11-201ENST00000413899 CDKN2A-AS1Q9UH64 79 aa1.5□□□□□ -2.17
HMGB1P11-201ENST00000413899 NIPBLQ6KC79 2804 aaeCLIP1.49□□□□□ -2.17
HMGB1P11-201ENST00000413899 MAST4O15021 2626 aa1.49□□□□□ -2.17
HMGB1P11-201ENST00000413899 FBN1P35555 2871 aaKnown RBP1.49□□□□□ -2.17
HMGB1P11-201ENST00000413899 A0A096LPF7 62 aa1.49□□□□□ -2.17
HMGB1P11-201ENST00000413899 TRBV6-8A0A0A6YYG3 113 aa1.49□□□□□ -2.17
HMGB1P11-201ENST00000413899 A0A0B4J2C4 111 aa1.49□□□□□ -2.17
HMGB1P11-201ENST00000413899 SMIM9A6NGZ8 99 aa1.49□□□□□ -2.17
HMGB1P11-201ENST00000413899 A8MWP4 228 aa1.49□□□□□ -2.17
HMGB1P11-201ENST00000413899 H3BUT2 72 aa1.49□□□□□ -2.17
HMGB1P11-201ENST00000413899 TIMM17BO60830 172 aa1.49□□□□□ -2.17
HMGB1P11-201ENST00000413899 IGHV3-33P01772 117 aa1.49□□□□□ -2.17
HMGB1P11-201ENST00000413899 MIAQ16674 131 aa1.49□□□□□ -2.17
HMGB1P11-201ENST00000413899 C12orf74Q32Q52 190 aa1.49□□□□□ -2.17
HMGB1P11-201ENST00000413899 TMEM170BQ5T4T1 132 aa1.49□□□□□ -2.17
HMGB1P11-201ENST00000413899 Q8NDZ9 215 aa1.49□□□□□ -2.17
HMGB1P11-201ENST00000413899 HIGD2AQ9BW72 106 aa1.49□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms