RNA–Protein interactions for RNA: ENST00000413232.5

CPSF7-204, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-204ENST00000413232 IGKV2D-26A0A0A0MRZ7 120 aa11.08□□□□□ -0.64
CPSF7-204ENST00000413232 RPL24P83731 157 aaKnown RBP11.08□□□□□ -0.64
CPSF7-204ENST00000413232 TMEM170BQ5T4T1 132 aa11.08□□□□□ -0.64
CPSF7-204ENST00000413232 A0A0U1RRA0 63 aa11.05□□□□□ -0.64
CPSF7-204ENST00000413232 CBLN2Q8IUK8 224 aa11.05□□□□□ -0.64
CPSF7-204ENST00000413232 FAT4Q6V0I7 4981 aa11.04□□□□□ -0.64
CPSF7-204ENST00000413232 MUC17Q685J3 4493 aa11.04□□□□□ -0.64
CPSF7-204ENST00000413232 LCE2AQ5TA79 106 aaPredicted RBP11.04□□□□□ -0.64
CPSF7-204ENST00000413232 LINC00158P58513 81 aa11.03□□□□□ -0.64
CPSF7-204ENST00000413232 HIGD2AQ9BW72 106 aa11.03□□□□□ -0.64
CPSF7-204ENST00000413232 IGLV7-46A0A075B6I9 117 aa11.02□□□□□ -0.65
CPSF7-204ENST00000413232 A0A0U1RQV1 116 aa11.02□□□□□ -0.65
CPSF7-204ENST00000413232 CHTOPQ9Y3Y2 248 aaKnown RBP11.02□□□□□ -0.65
CPSF7-204ENST00000413232 TMEM223A0PJW6 202 aa11.01□□□□□ -0.65
CPSF7-204ENST00000413232 TPRXLQ17RH7 258 aa11.01□□□□□ -0.65
CPSF7-204ENST00000413232 SFTA2Q6UW10 78 aa11□□□□□ -0.65
CPSF7-204ENST00000413232 SPRR4Q96PI1 79 aa11□□□□□ -0.65
CPSF7-204ENST00000413232 CDIP1Q9H305 208 aa10.99□□□□□ -0.65
CPSF7-204ENST00000413232 SMIM13P0DJ93 91 aa10.98□□□□□ -0.65
CPSF7-204ENST00000413232 APOC3P02656 99 aa10.97□□□□□ -0.65
CPSF7-204ENST00000413232 KRTAP9-2Q9BYQ4 174 aa10.97□□□□□ -0.65
CPSF7-204ENST00000413232 CTAG1AP78358 180 aa10.96□□□□□ -0.65
CPSF7-204ENST00000413232 IFI27L1Q96BM0 104 aa10.96□□□□□ -0.65
CPSF7-204ENST00000413232 YPEL4Q96NS1 127 aa10.96□□□□□ -0.65
CPSF7-204ENST00000413232 PPDPFQ9H3Y8 114 aa10.96□□□□□ -0.65
CPSF7-204ENST00000413232 TRAV12-1A0A0B4J245 112 aa10.95□□□□□ -0.66
CPSF7-204ENST00000413232 NCR3O14931 201 aa10.94□□□□□ -0.66
CPSF7-204ENST00000413232 SPRR1AP35321 89 aa10.94□□□□□ -0.66
CPSF7-204ENST00000413232 BOD1L2Q8IYS8 172 aa10.94□□□□□ -0.66
CPSF7-204ENST00000413232 MIR7-3HGQ8N6C7 128 aa10.94□□□□□ -0.66
CPSF7-204ENST00000413232 KRTAP4-16G5E9R7 235 aaPredicted RBP10.93□□□□□ -0.66
CPSF7-204ENST00000413232 DAND5Q8N907 189 aa10.93□□□□□ -0.66
CPSF7-204ENST00000413232 PRYO14603 147 aa10.92□□□□□ -0.66
CPSF7-204ENST00000413232 CHCHD1Q96BP2 118 aaKnown RBP10.92□□□□□ -0.66
CPSF7-204ENST00000413232 MEIG1Q5JSS6 88 aa10.91□□□□□ -0.66
CPSF7-204ENST00000413232 SPAG11AQ6PDA7 123 aa10.91□□□□□ -0.66
CPSF7-204ENST00000413232 FAM19A2Q8N3H0 131 aa10.91□□□□□ -0.66
CPSF7-204ENST00000413232 SMCR5Q8TEV8 140 aa10.91□□□□□ -0.66
CPSF7-204ENST00000413232 KCNQ1DNQ9H478 68 aa10.91□□□□□ -0.66
CPSF7-204ENST00000413232 SNAPINO95295 136 aa10.9□□□□□ -0.66
CPSF7-204ENST00000413232 LINC00337Q8N6G1 96 aa10.9□□□□□ -0.66
CPSF7-204ENST00000413232 TRBV10-3A0A0K0K1G6 114 aa10.89□□□□□ -0.67
CPSF7-204ENST00000413232 ATP6V1G1O75348 118 aa10.89□□□□□ -0.67
CPSF7-204ENST00000413232 SVBPQ8N300 66 aa10.89□□□□□ -0.67
CPSF7-204ENST00000413232 Q8NBF4 154 aa10.89□□□□□ -0.67
CPSF7-204ENST00000413232 TSPEAR-AS2P59090 65 aa10.88□□□□□ -0.67
CPSF7-204ENST00000413232 NDUFA12Q9UI09 145 aa10.88□□□□□ -0.67
CPSF7-204ENST00000413232 HERV-K104P63124 156 aa10.87□□□□□ -0.67
CPSF7-204ENST00000413232 ZNF706Q9Y5V0 76 aaPredicted RBP10.87□□□□□ -0.67
CPSF7-204ENST00000413232 ETDCA0A1B0GVM5 59 aa10.85□□□□□ -0.67
CPSF7-204ENST00000413232 ERC2-IT1O76042 136 aa10.85□□□□□ -0.67
CPSF7-204ENST00000413232 H0Y8G0 127 aa10.84□□□□□ -0.67
CPSF7-204ENST00000413232 KRTAP13-3Q3SY46 172 aa10.84□□□□□ -0.67
CPSF7-204ENST00000413232 LINC00483Q53H64 154 aa10.84□□□□□ -0.67
CPSF7-204ENST00000413232 C4orf48Q5BLP8 95 aa10.84□□□□□ -0.67
CPSF7-204ENST00000413232 FP248Q71RG6 208 aaPredicted RBP10.84□□□□□ -0.67
CPSF7-204ENST00000413232 MYMXA0A1B0GTQ4 84 aa10.83□□□□□ -0.68
CPSF7-204ENST00000413232 B5MCH6 92 aa10.83□□□□□ -0.68
CPSF7-204ENST00000413232 HSBP1O75506 76 aa10.83□□□□□ -0.68
CPSF7-204ENST00000413232 LINC00310P59036 64 aa10.83□□□□□ -0.68
CPSF7-204ENST00000413232 NDUFA5Q16718 116 aa10.83□□□□□ -0.68
CPSF7-204ENST00000413232 GAGE2AQ6NT46 116 aa10.82□□□□□ -0.68
CPSF7-204ENST00000413232 LOC107984156A0A0G2JMH3 177 aa10.81□□□□□ -0.68
CPSF7-204ENST00000413232 ARL17AQ8IVW1 177 aa10.81□□□□□ -0.68
CPSF7-204ENST00000413232 LINC00587B1AMM8 73 aa10.8□□□□□ -0.68
CPSF7-204ENST00000413232 Q9BRP9 147 aa10.8□□□□□ -0.68
CPSF7-204ENST00000413232 LEPROTO15243 131 aa10.79□□□□□ -0.68
CPSF7-204ENST00000413232 SPINK1P00995 79 aa10.79□□□□□ -0.68
CPSF7-204ENST00000413232 MAP1LC3CQ9BXW4 147 aa10.79□□□□□ -0.68
CPSF7-204ENST00000413232 KRTAP4-1Q9BYQ7 146 aa10.79□□□□□ -0.68
CPSF7-204ENST00000413232 TRGC2P03986 189 aa10.78□□□□□ -0.68
CPSF7-204ENST00000413232 MOBPQ13875 183 aa10.78□□□□□ -0.68
CPSF7-204ENST00000413232 IGLV9-49A0A0B4J1Y8 123 aa10.77□□□□□ -0.69
CPSF7-204ENST00000413232 DDTP30046 118 aa10.77□□□□□ -0.69
CPSF7-204ENST00000413232 TRBV10-2A0A0K0K1G8 114 aa10.76□□□□□ -0.69
CPSF7-204ENST00000413232 J3QQQ9 107 aa10.76□□□□□ -0.69
CPSF7-204ENST00000413232 EIF4EBP3O60516 100 aaPredicted RBP10.76□□□□□ -0.69
CPSF7-204ENST00000413232 SERF1AO75920 110 aa10.76□□□□□ -0.69
CPSF7-204ENST00000413232 LEPROTL1O95214 131 aa10.76□□□□□ -0.69
CPSF7-204ENST00000413232 ASB16-AS1Q495Z4 193 aa10.76□□□□□ -0.69
CPSF7-204ENST00000413232 PMCHL2Q9BQD1 86 aa10.76□□□□□ -0.69
CPSF7-204ENST00000413232 Q8N377 158 aa10.75□□□□□ -0.69
CPSF7-204ENST00000413232 Q6ZRX8 168 aa10.74□□□□□ -0.69
CPSF7-204ENST00000413232 SOSTDC1Q6X4U4 206 aa10.73□□□□□ -0.69
CPSF7-204ENST00000413232 IGLV6-57P01721 117 aa10.72□□□□□ -0.69
CPSF7-204ENST00000413232 FABP4P15090 132 aa10.72□□□□□ -0.69
CPSF7-204ENST00000413232 PLNP26678 52 aa10.72□□□□□ -0.69
CPSF7-204ENST00000413232 S100A12P80511 92 aa10.72□□□□□ -0.69
CPSF7-204ENST00000413232 SSBP3-AS1Q7Z2R9 100 aa10.72□□□□□ -0.69
CPSF7-204ENST00000413232 DPM2O94777 84 aa10.71□□□□□ -0.69
CPSF7-204ENST00000413232 ADAMTSL4-AS1Q5T5F5 129 aa10.71□□□□□ -0.69
CPSF7-204ENST00000413232 SPANXB1Q9NS25 103 aaPredicted RBP10.71□□□□□ -0.69
CPSF7-204ENST00000413232 NDUFC2O95298 119 aa10.69□□□□□ -0.7
CPSF7-204ENST00000413232 NPC2P61916 151 aa10.69□□□□□ -0.7
CPSF7-204ENST00000413232 RPS29P62273 56 aaKnown RBP10.69□□□□□ -0.7
CPSF7-204ENST00000413232 IGKCP01834 107 aa10.68□□□□□ -0.7
CPSF7-204ENST00000413232 LGALS3P17931 250 aaKnown RBP10.68□□□□□ -0.7
CPSF7-204ENST00000413232 NMUP48645 174 aa10.68□□□□□ -0.7
CPSF7-204ENST00000413232 S100A7L2Q5SY68 101 aa10.68□□□□□ -0.7
CPSF7-204ENST00000413232 ST20-AS1Q8NBB2 130 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms