RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 PLA2G2DQ9UNK4 145 aa11.47□□□□□ -0.57
TRIM56-202ENST00000412507 C20orf202A1L168 122 aa11.45□□□□□ -0.58
TRIM56-202ENST00000412507 C3orf79P0CE67 100 aa11.45□□□□□ -0.58
TRIM56-202ENST00000412507 ODF1Q14990 250 aa11.45□□□□□ -0.58
TRIM56-202ENST00000412507 DIRC1Q969H9 104 aa11.45□□□□□ -0.58
TRIM56-202ENST00000412507 LINC00167Q96N53 147 aa11.45□□□□□ -0.58
TRIM56-202ENST00000412507 AKR1D1P51857 326 aa11.44□□□□□ -0.58
TRIM56-202ENST00000412507 KRTAP10-8P60410 259 aa11.44□□□□□ -0.58
TRIM56-202ENST00000412507 HMCN2Q8NDA2 5059 aa11.44□□□□□ -0.58
TRIM56-202ENST00000412507 H0Y9J4 135 aa11.43□□□□□ -0.58
TRIM56-202ENST00000412507 COX17Q14061 63 aa11.43□□□□□ -0.58
TRIM56-202ENST00000412507 SFTA2Q6UW10 78 aa11.43□□□□□ -0.58
TRIM56-202ENST00000412507 IGLV5-37A0A075B6J1 123 aa11.42□□□□□ -0.58
TRIM56-202ENST00000412507 GAGE10A6NGK3 116 aa11.42□□□□□ -0.58
TRIM56-202ENST00000412507 RPL37AP8A6NKH3 93 aa11.42□□□□□ -0.58
TRIM56-202ENST00000412507 NKAPP1Q8N9T2 125 aa11.42□□□□□ -0.58
TRIM56-202ENST00000412507 SND1-IT1Q9HBX3 110 aa11.42□□□□□ -0.58
TRIM56-202ENST00000412507 PLNP26678 52 aa11.4□□□□□ -0.58
TRIM56-202ENST00000412507 LINC01545Q5VT33 79 aa11.4□□□□□ -0.58
TRIM56-202ENST00000412507 A0A0U1RRA0 63 aa11.38□□□□□ -0.59
TRIM56-202ENST00000412507 DPM2O94777 84 aa11.38□□□□□ -0.59
TRIM56-202ENST00000412507 LINC00158P58513 81 aa11.38□□□□□ -0.59
TRIM56-202ENST00000412507 ZNF861PO60384 105 aa11.37□□□□□ -0.59
TRIM56-202ENST00000412507 VPREB1P12018 145 aa11.37□□□□□ -0.59
TRIM56-202ENST00000412507 PMCHL2Q9BQD1 86 aa11.37□□□□□ -0.59
TRIM56-202ENST00000412507 IGKCP01834 107 aa11.36□□□□□ -0.59
TRIM56-202ENST00000412507 BCE1O60756 84 aa11.35□□□□□ -0.59
TRIM56-202ENST00000412507 SCGB1D1O95968 90 aa11.35□□□□□ -0.59
TRIM56-202ENST00000412507 RPL24P83731 157 aaKnown RBP11.35□□□□□ -0.59
TRIM56-202ENST00000412507 Q8NDZ9 215 aa11.35□□□□□ -0.59
TRIM56-202ENST00000412507 IGKV2-28A0A075B6P5 120 aa11.34□□□□□ -0.59
TRIM56-202ENST00000412507 IGKV2D-28P01615 120 aa11.34□□□□□ -0.59
TRIM56-202ENST00000412507 KRTAP1-4P0C5Y4 121 aa11.34□□□□□ -0.59
TRIM56-202ENST00000412507 SMIM13P0DJ93 91 aa11.34□□□□□ -0.59
TRIM56-202ENST00000412507 JOSD1Q15040 202 aaPredicted RBP11.34□□□□□ -0.59
TRIM56-202ENST00000412507 MEIG1Q5JSS6 88 aa11.34□□□□□ -0.59
TRIM56-202ENST00000412507 PRR26Q8N8Z3 221 aa11.34□□□□□ -0.59
TRIM56-202ENST00000412507 NDUFA12Q9UI09 145 aa11.34□□□□□ -0.59
TRIM56-202ENST00000412507 LEPROTO15243 131 aa11.33□□□□□ -0.6
TRIM56-202ENST00000412507 TSPEAR-AS2P59090 65 aa11.33□□□□□ -0.6
TRIM56-202ENST00000412507 RPL28P46779 137 aaKnown RBP11.32□□□□□ -0.6
TRIM56-202ENST00000412507 HERV-K104P63124 156 aa11.32□□□□□ -0.6
TRIM56-202ENST00000412507 MYMXA0A1B0GTQ4 84 aa11.31□□□□□ -0.6
TRIM56-202ENST00000412507 LOC105371267A0A1B0GV96 52 aa11.31□□□□□ -0.6
TRIM56-202ENST00000412507 PLEKHB2Q96CS7 222 aa11.31□□□□□ -0.6
TRIM56-202ENST00000412507 IGLV1-50A0A075B6I6 118 aa11.3□□□□□ -0.6
TRIM56-202ENST00000412507 HERVK_113P61574 105 aa11.3□□□□□ -0.6
TRIM56-202ENST00000412507 MIR7-3HGQ8N6C7 128 aa11.3□□□□□ -0.6
TRIM56-202ENST00000412507 HSBP1L1C9JCN9 74 aa11.28□□□□□ -0.6
TRIM56-202ENST00000412507 J3QQQ9 107 aa11.28□□□□□ -0.6
TRIM56-202ENST00000412507 LINC00587B1AMM8 73 aa11.27□□□□□ -0.61
TRIM56-202ENST00000412507 TMEM238C9JI98 176 aa11.27□□□□□ -0.61
TRIM56-202ENST00000412507 UBE2AP49459 152 aa11.27□□□□□ -0.61
TRIM56-202ENST00000412507 PYY3Q5JQD4 70 aa11.27□□□□□ -0.61
TRIM56-202ENST00000412507 KRTAP13-1Q8IUC0 172 aa11.26□□□□□ -0.61
TRIM56-202ENST00000412507 BOD1L2Q8IYS8 172 aa11.26□□□□□ -0.61
TRIM56-202ENST00000412507 ATOH7Q8N100 152 aa11.26□□□□□ -0.61
TRIM56-202ENST00000412507 TMEM126AQ9H061 195 aa11.26□□□□□ -0.61
TRIM56-202ENST00000412507 LGALS3P17931 250 aaKnown RBP11.25□□□□□ -0.61
TRIM56-202ENST00000412507 M0R378 163 aa11.24□□□□□ -0.61
TRIM56-202ENST00000412507 FAM19A1Q7Z5A9 133 aa11.24□□□□□ -0.61
TRIM56-202ENST00000412507 SMIM6P0DI80 62 aa11.23□□□□□ -0.61
TRIM56-202ENST00000412507 NMUP48645 174 aa11.23□□□□□ -0.61
TRIM56-202ENST00000412507 PRLHP81277 87 aa11.23□□□□□ -0.61
TRIM56-202ENST00000412507 DAND5Q8N907 189 aa11.23□□□□□ -0.61
TRIM56-202ENST00000412507 E9PLD3 99 aa11.22□□□□□ -0.61
TRIM56-202ENST00000412507 NCR3O14931 201 aa11.22□□□□□ -0.61
TRIM56-202ENST00000412507 RPL13AP40429 203 aaKnown RBP11.21□□□□□ -0.61
TRIM56-202ENST00000412507 VAMP8Q9BV40 100 aa11.21□□□□□ -0.61
TRIM56-202ENST00000412507 S100A12P80511 92 aa11.2□□□□□ -0.62
TRIM56-202ENST00000412507 UBR4Q5T4S7 5183 aa11.19□□□□□ -0.62
TRIM56-202ENST00000412507 ANAPC11Q9NYG5 84 aa11.18□□□□□ -0.62
TRIM56-202ENST00000412507 A0A087X002 238 aa11.17□□□□□ -0.62
TRIM56-202ENST00000412507 IGKV2D-26A0A0A0MRZ7 120 aa11.17□□□□□ -0.62
TRIM56-202ENST00000412507 LOC107984156A0A0G2JMH3 177 aa11.17□□□□□ -0.62
TRIM56-202ENST00000412507 ARL17AQ8IVW1 177 aa11.17□□□□□ -0.62
TRIM56-202ENST00000412507 A0A0J9YXY3 114 aa11.16□□□□□ -0.62
TRIM56-202ENST00000412507 ANKRD39Q53RE8 183 aa11.16□□□□□ -0.62
TRIM56-202ENST00000412507 PAM16Q9Y3D7 125 aa11.16□□□□□ -0.62
TRIM56-202ENST00000412507 LRP2P98164 4655 aa11.15□□□□□ -0.62
TRIM56-202ENST00000412507 PRYO14603 147 aa11.15□□□□□ -0.62
TRIM56-202ENST00000412507 CRYGAP11844 174 aa11.15□□□□□ -0.62
TRIM56-202ENST00000412507 SPATA45Q537H7 98 aa11.15□□□□□ -0.62
TRIM56-202ENST00000412507 TRBV10-3A0A0K0K1G6 114 aa11.14□□□□□ -0.63
TRIM56-202ENST00000412507 MIEN1Q9BRT3 115 aa11.14□□□□□ -0.63
TRIM56-202ENST00000412507 NPC2P61916 151 aa11.13□□□□□ -0.63
TRIM56-202ENST00000412507 ADAMTSL4-AS1Q5T5F5 129 aa11.13□□□□□ -0.63
TRIM56-202ENST00000412507 HIGD2AQ9BW72 106 aa11.13□□□□□ -0.63
TRIM56-202ENST00000412507 KCNQ1DNQ9H478 68 aa11.13□□□□□ -0.63
TRIM56-202ENST00000412507 KRTAP13-2Q52LG2 175 aa11.11□□□□□ -0.63
TRIM56-202ENST00000412507 SOSTDC1Q6X4U4 206 aa11.11□□□□□ -0.63
TRIM56-202ENST00000412507 TYMSOSQ8TAI1 123 aa11.11□□□□□ -0.63
TRIM56-202ENST00000412507 TRBV10-2A0A0K0K1G8 114 aa11.1□□□□□ -0.63
TRIM56-202ENST00000412507 EIF4EBP3O60516 100 aaPredicted RBP11.1□□□□□ -0.63
TRIM56-202ENST00000412507 SPRR1AP35321 89 aa11.1□□□□□ -0.63
TRIM56-202ENST00000412507 FAM229BQ4G0N7 80 aa11.1□□□□□ -0.63
TRIM56-202ENST00000412507 C12orf57Q99622 126 aa11.1□□□□□ -0.63
TRIM56-202ENST00000412507 ZNF815PA8K554 130 aa11.09□□□□□ -0.63
TRIM56-202ENST00000412507 DDTP30046 118 aa11.09□□□□□ -0.63
TRIM56-202ENST00000412507 LINC00337Q8N6G1 96 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 112.9 ms