RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 SETD2Q9BYW2 2564 aaPredicted RBP7.92□□□□□ -1.14
PRPF40A-202ENST00000410080 A0A087WVE0 104 aa7.91□□□□□ -1.14
PRPF40A-202ENST00000410080 RPL37AP61513 92 aaKnown RBP7.91□□□□□ -1.14
PRPF40A-202ENST00000410080 KIAA0087Q14695 138 aa7.9□□□□□ -1.14
PRPF40A-202ENST00000410080 SMIM26A0A096LP01 95 aa7.9□□□□□ -1.15
PRPF40A-202ENST00000410080 Q8N2B8 174 aa7.9□□□□□ -1.15
PRPF40A-202ENST00000410080 C6orf48Q9UBA6 75 aa7.9□□□□□ -1.15
PRPF40A-202ENST00000410080 DNAH12Q6ZR08 3092 aa7.89□□□□□ -1.15
PRPF40A-202ENST00000410080 A0A1W2PPR1 153 aa7.89□□□□□ -1.15
PRPF40A-202ENST00000410080 IGIPA6NJ69 53 aa7.89□□□□□ -1.15
PRPF40A-202ENST00000410080 NCOR2Q9Y618 2525 aa7.89□□□□□ -1.15
PRPF40A-202ENST00000410080 C2orf91Q6ZV80 131 aa7.89□□□□□ -1.15
PRPF40A-202ENST00000410080 ADAMTSL4-AS1Q5T5F5 129 aa7.88□□□□□ -1.15
PRPF40A-202ENST00000410080 ZNF580Q9UK33 172 aa7.88□□□□□ -1.15
PRPF40A-202ENST00000410080 ZNF462Q96JM2 2506 aa7.88□□□□□ -1.15
PRPF40A-202ENST00000410080 A0A1B0GUV1 79 aa7.86□□□□□ -1.15
PRPF40A-202ENST00000410080 SMIM29Q86T20 159 aa7.86□□□□□ -1.15
PRPF40A-202ENST00000410080 SPTBN4Q9H254 2564 aa7.86□□□□□ -1.15
PRPF40A-202ENST00000410080 Q6ZRP5 223 aa7.86□□□□□ -1.15
PRPF40A-202ENST00000410080 PCNTO95613 3336 aa7.86□□□□□ -1.15
PRPF40A-202ENST00000410080 LINC00315P59091 139 aa7.85□□□□□ -1.15
PRPF40A-202ENST00000410080 PRRC2CQ9Y520 2896 aaKnown RBP7.84□□□□□ -1.15
PRPF40A-202ENST00000410080 C5orf42Q9H799 3197 aa7.84□□□□□ -1.15
PRPF40A-202ENST00000410080 PKD1L2Q7Z442 2459 aa7.84□□□□□ -1.15
PRPF40A-202ENST00000410080 APLNQ9ULZ1 77 aa7.84□□□□□ -1.15
PRPF40A-202ENST00000410080 TSPEAR-AS2P59090 65 aa7.83□□□□□ -1.16
PRPF40A-202ENST00000410080 C9orf92A6NGG3 77 aa7.83□□□□□ -1.16
PRPF40A-202ENST00000410080 TMEM254Q8TBM7 123 aa7.83□□□□□ -1.16
PRPF40A-202ENST00000410080 LINC00167Q96N53 147 aa7.82□□□□□ -1.16
PRPF40A-202ENST00000410080 SSBP3-AS1Q7Z2R9 100 aa7.82□□□□□ -1.16
PRPF40A-202ENST00000410080 CDIP1Q9H305 208 aa7.82□□□□□ -1.16
PRPF40A-202ENST00000410080 COL4A2P08572 1712 aa7.82□□□□□ -1.16
PRPF40A-202ENST00000410080 WWC2-AS2Q96NR7 200 aa7.81□□□□□ -1.16
PRPF40A-202ENST00000410080 YPEL4Q96NS1 127 aa7.8□□□□□ -1.16
PRPF40A-202ENST00000410080 TP53AIP1Q9HCN2 124 aa7.8□□□□□ -1.16
PRPF40A-202ENST00000410080 ANKRD11Q6UB99 2663 aaPredicted RBP7.8□□□□□ -1.16
PRPF40A-202ENST00000410080 EPM2AB3EWF7 344 aa7.79□□□□□ -1.16
PRPF40A-202ENST00000410080 NBDYA0A0U1RRE5 68 aa7.79□□□□□ -1.16
PRPF40A-202ENST00000410080 KIF25-AS1Q9Y6Z4 181 aa7.79□□□□□ -1.16
PRPF40A-202ENST00000410080 CNFNQ9BYD5 112 aa7.78□□□□□ -1.16
PRPF40A-202ENST00000410080 AMELXQ99217 191 aa7.77□□□□□ -1.17
PRPF40A-202ENST00000410080 Q8NBF4 154 aa7.77□□□□□ -1.17
PRPF40A-202ENST00000410080 SMR3BP02814 79 aaPredicted RBP7.76□□□□□ -1.17
PRPF40A-202ENST00000410080 CXCL6P80162 114 aa7.76□□□□□ -1.17
PRPF40A-202ENST00000410080 USP24Q9UPU5 2620 aa7.76□□□□□ -1.17
PRPF40A-202ENST00000410080 TRAV22A0A0B4J277 110 aa7.76□□□□□ -1.17
PRPF40A-202ENST00000410080 LINC01554Q52M75 96 aa7.76□□□□□ -1.17
PRPF40A-202ENST00000410080 C4orf26Q17RF5 130 aa7.75□□□□□ -1.17
PRPF40A-202ENST00000410080 KRTAP24-1Q3LI83 254 aa7.75□□□□□ -1.17
PRPF40A-202ENST00000410080 LINC00476Q8WZB0 136 aa7.75□□□□□ -1.17
PRPF40A-202ENST00000410080 LINC00846Q9NV44 126 aa7.74□□□□□ -1.17
PRPF40A-202ENST00000410080 LINC01561Q8N1V8 128 aa7.74□□□□□ -1.17
PRPF40A-202ENST00000410080 POLQO75417 2590 aa7.74□□□□□ -1.17
PRPF40A-202ENST00000410080 FAM168BA1KXE4 195 aa7.72□□□□□ -1.17
PRPF40A-202ENST00000410080 SPATA3Q8NHX4 192 aa7.72□□□□□ -1.17
PRPF40A-202ENST00000410080 LINC00588Q9Y4M8 146 aa7.72□□□□□ -1.17
PRPF40A-202ENST00000410080 URB1-AS1Q96HZ7 61 aa7.72□□□□□ -1.17
PRPF40A-202ENST00000410080 IGLV6-57P01721 117 aa7.72□□□□□ -1.17
PRPF40A-202ENST00000410080 OBSCN-AS1Q96MR7 158 aa7.7□□□□□ -1.18
PRPF40A-202ENST00000410080 BCE1O60756 84 aa7.7□□□□□ -1.18
PRPF40A-202ENST00000410080 FAM19A4Q96LR4 140 aa7.7□□□□□ -1.18
PRPF40A-202ENST00000410080 ST20-AS1Q8NBB2 130 aa7.7□□□□□ -1.18
PRPF40A-202ENST00000410080 RBM12B-AS1Q9P1G2 102 aa7.69□□□□□ -1.18
PRPF40A-202ENST00000410080 CRIPTQ9P021 101 aa7.69□□□□□ -1.18
PRPF40A-202ENST00000410080 LINC00304Q8N9R0 145 aa7.69□□□□□ -1.18
PRPF40A-202ENST00000410080 CEP350Q5VT06 3117 aa7.68□□□□□ -1.18
PRPF40A-202ENST00000410080 C8orf87E5RJ46 101 aa7.68□□□□□ -1.18
PRPF40A-202ENST00000410080 XIRP2A4UGR9 3374 aa7.68□□□□□ -1.18
PRPF40A-202ENST00000410080 M0R2T5 61 aa7.68□□□□□ -1.18
PRPF40A-202ENST00000410080 MTORP42345 2549 aa7.67□□□□□ -1.18
PRPF40A-202ENST00000410080 IGLV5-37A0A075B6J1 123 aa7.67□□□□□ -1.18
PRPF40A-202ENST00000410080 DSCR10P59022 87 aa7.66□□□□□ -1.18
PRPF40A-202ENST00000410080 Q6ZRX8 168 aa7.66□□□□□ -1.18
PRPF40A-202ENST00000410080 C10orf142B7Z368 130 aa7.65□□□□□ -1.18
PRPF40A-202ENST00000410080 LINC00310P59036 64 aa7.65□□□□□ -1.18
PRPF40A-202ENST00000410080 C11orf72Q8NBR9 251 aa7.65□□□□□ -1.19
PRPF40A-202ENST00000410080 C9orf129Q5T035 196 aaKnown RBP7.64□□□□□ -1.19
PRPF40A-202ENST00000410080 PRO0628Q9UI54 55 aa7.64□□□□□ -1.19
PRPF40A-202ENST00000410080 LINC01600Q96MT4 127 aa7.64□□□□□ -1.19
PRPF40A-202ENST00000410080 K7EQZ3 153 aa7.63□□□□□ -1.19
PRPF40A-202ENST00000410080 ELOF1P60002 83 aaKnown RBP7.63□□□□□ -1.19
PRPF40A-202ENST00000410080 A0A0D9SG42 100 aa7.63□□□□□ -1.19
PRPF40A-202ENST00000410080 DNAH10OSP0CZ25 163 aa7.62□□□□□ -1.19
PRPF40A-202ENST00000410080 CHD8Q9HCK8 2581 aa7.61□□□□□ -1.19
PRPF40A-202ENST00000410080 H3BNG1 76 aa7.6□□□□□ -1.19
PRPF40A-202ENST00000410080 FASNP49327 2511 aaKnown RBP7.59□□□□□ -1.19
PRPF40A-202ENST00000410080 TM2D3Q9BRN9 247 aa7.59□□□□□ -1.19
PRPF40A-202ENST00000410080 A0A096LNJ9 63 aa7.59□□□□□ -1.19
PRPF40A-202ENST00000410080 Q8NAQ8 132 aa7.59□□□□□ -1.19
PRPF40A-202ENST00000410080 IGLV5-39A0A0G2JS06 123 aa7.58□□□□□ -1.2
PRPF40A-202ENST00000410080 IGHV3OR16-9A0A0B4J2B5 98 aa7.58□□□□□ -1.2
PRPF40A-202ENST00000410080 CSNK1G2-AS1Q8NCQ2 148 aa7.58□□□□□ -1.2
PRPF40A-202ENST00000410080 A8MWP4 228 aa7.56□□□□□ -1.2
PRPF40A-202ENST00000410080 GVQW2A0A096LPI5 108 aaPredicted RBP7.56□□□□□ -1.2
PRPF40A-202ENST00000410080 MRPL34Q9BQ48 92 aaKnown RBP7.56□□□□□ -1.2
PRPF40A-202ENST00000410080 Q6ZQT0 140 aa7.55□□□□□ -1.2
PRPF40A-202ENST00000410080 ZNF575Q86XF7 245 aa7.55□□□□□ -1.2
PRPF40A-202ENST00000410080 COX8CQ7Z4L0 72 aa7.55□□□□□ -1.2
PRPF40A-202ENST00000410080 ANAPC11Q9NYG5 84 aa7.55□□□□□ -1.2
PRPF40A-202ENST00000410080 H3BPC8 53 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms