RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 MIAQ16674 131 aa3.72□□□□□ -1.81
EPHA4-202ENST00000409854 KRTAP26-1Q6PEX3 210 aa3.72□□□□□ -1.81
EPHA4-202ENST00000409854 APLNQ9ULZ1 77 aa3.72□□□□□ -1.81
EPHA4-202ENST00000409854 PKIGQ9Y2B9 76 aa3.72□□□□□ -1.81
EPHA4-202ENST00000409854 PRKDCP78527 4128 aaKnown RBP3.72□□□□□ -1.81
EPHA4-202ENST00000409854 CCL18P55774 89 aa3.71□□□□□ -1.82
EPHA4-202ENST00000409854 NPC2P61916 151 aa3.71□□□□□ -1.82
EPHA4-202ENST00000409854 C5orf38Q86SI9 138 aa3.71□□□□□ -1.82
EPHA4-202ENST00000409854 Q8IZM0 81 aa3.71□□□□□ -1.82
EPHA4-202ENST00000409854 SERP1Q9Y6X1 66 aa3.71□□□□□ -1.82
EPHA4-202ENST00000409854 MEGF8Q7Z7M0 2845 aa3.71□□□□□ -1.82
EPHA4-202ENST00000409854 COX7A2LO14548 114 aa3.71□□□□□ -1.82
EPHA4-202ENST00000409854 CRPP02741 224 aa3.71□□□□□ -1.82
EPHA4-202ENST00000409854 Q9H8V8 135 aa3.71□□□□□ -1.82
EPHA4-202ENST00000409854 DNAH7Q8WXX0 4024 aa3.71□□□□□ -1.82
EPHA4-202ENST00000409854 IGLV10-54A0A075B6I4 117 aa3.71□□□□□ -1.82
EPHA4-202ENST00000409854 NUPR2A6NF83 97 aa3.71□□□□□ -1.82
EPHA4-202ENST00000409854 SMIM26A0A096LP01 95 aa3.7□□□□□ -1.82
EPHA4-202ENST00000409854 LOC107984156A0A0G2JMH3 177 aa3.7□□□□□ -1.82
EPHA4-202ENST00000409854 KIAA0087Q14695 138 aa3.7□□□□□ -1.82
EPHA4-202ENST00000409854 ARL17AQ8IVW1 177 aa3.7□□□□□ -1.82
EPHA4-202ENST00000409854 UBE2WQ96B02 151 aa3.7□□□□□ -1.82
EPHA4-202ENST00000409854 KLK5Q9Y337 293 aaPredicted RBP3.7□□□□□ -1.82
EPHA4-202ENST00000409854 IBA57-AS1B1ANH7 110 aa3.69□□□□□ -1.82
EPHA4-202ENST00000409854 VPREB1P12018 145 aa3.69□□□□□ -1.82
EPHA4-202ENST00000409854 ADAMTSL4-AS1Q5T5F5 129 aa3.69□□□□□ -1.82
EPHA4-202ENST00000409854 Q6ZRU5 148 aa3.69□□□□□ -1.82
EPHA4-202ENST00000409854 CSMD3Q7Z407 3707 aa3.69□□□□□ -1.82
EPHA4-202ENST00000409854 PRSS2P07478 247 aa3.69□□□□□ -1.82
EPHA4-202ENST00000409854 HIST1H4AP62805 103 aaKnown RBP3.69□□□□□ -1.82
EPHA4-202ENST00000409854 LINC00643Q86TS7 51 aa3.69□□□□□ -1.82
EPHA4-202ENST00000409854 Q1RN00 199 aa3.69□□□□□ -1.82
EPHA4-202ENST00000409854 DNAH1Q9P2D7 4330 aa3.69□□□□□ -1.82
EPHA4-202ENST00000409854 PRR15Q8IV56 129 aa3.68□□□□□ -1.82
EPHA4-202ENST00000409854 C2orf48Q96LS8 159 aa3.68□□□□□ -1.82
EPHA4-202ENST00000409854 TOMM7Q9P0U1 55 aa3.68□□□□□ -1.82
EPHA4-202ENST00000409854 ATP5EP56381 51 aaPredicted RBP3.68□□□□□ -1.82
EPHA4-202ENST00000409854 CIRBPQ14011 172 aaKnown RBP3.68□□□□□ -1.82
EPHA4-202ENST00000409854 MUSTN1Q8IVN3 82 aa3.68□□□□□ -1.82
EPHA4-202ENST00000409854 SLC25A20O43772 301 aa3.68□□□□□ -1.82
EPHA4-202ENST00000409854 STAB2Q8WWQ8 2551 aa3.68□□□□□ -1.82
EPHA4-202ENST00000409854 H3BT86 120 aa3.67□□□□□ -1.82
EPHA4-202ENST00000409854 PSMB2P49721 201 aa3.67□□□□□ -1.82
EPHA4-202ENST00000409854 MRPL55Q7Z7F7 128 aaKnown RBP3.67□□□□□ -1.82
EPHA4-202ENST00000409854 C15orf56Q8N910 161 aa3.67□□□□□ -1.82
EPHA4-202ENST00000409854 STARD9Q9P2P6 4700 aa3.67□□□□□ -1.82
EPHA4-202ENST00000409854 TRBV7-6A0A0J9YX20 115 aa3.67□□□□□ -1.82
EPHA4-202ENST00000409854 EIF4EBP3O60516 100 aaPredicted RBP3.67□□□□□ -1.82
EPHA4-202ENST00000409854 SPAG11BQ08648 103 aa3.67□□□□□ -1.82
EPHA4-202ENST00000409854 C2orf82Q6UX34 121 aa3.67□□□□□ -1.82
EPHA4-202ENST00000409854 SERP2Q8N6R1 65 aa3.67□□□□□ -1.82
EPHA4-202ENST00000409854 LINC00308Q8TCZ7 52 aa3.67□□□□□ -1.82
EPHA4-202ENST00000409854 NTN5Q8WTR8 489 aaPredicted RBP3.67□□□□□ -1.82
EPHA4-202ENST00000409854 A0A0B4J2C4 111 aa3.66□□□□□ -1.82
EPHA4-202ENST00000409854 USP17L23D6RBM5 183 aa3.66□□□□□ -1.82
EPHA4-202ENST00000409854 CFC1BP0CG36 223 aa3.66□□□□□ -1.82
EPHA4-202ENST00000409854 CFC1P0CG37 223 aa3.66□□□□□ -1.82
EPHA4-202ENST00000409854 COX17Q14061 63 aa3.66□□□□□ -1.82
EPHA4-202ENST00000409854 SOSTDC1Q6X4U4 206 aa3.66□□□□□ -1.82
EPHA4-202ENST00000409854 SDIM1Q6ZPB5 146 aa3.66□□□□□ -1.82
EPHA4-202ENST00000409854 GVQW2A0A096LPI5 108 aaPredicted RBP3.66□□□□□ -1.82
EPHA4-202ENST00000409854 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.66□□□□□ -1.82
EPHA4-202ENST00000409854 DAND5Q8N907 189 aa3.66□□□□□ -1.82
EPHA4-202ENST00000409854 KRTAP1-5Q9BYS1 174 aa3.66□□□□□ -1.82
EPHA4-202ENST00000409854 IGKV2D-24A0A075B6R9 120 aa3.65□□□□□ -1.82
EPHA4-202ENST00000409854 MUC7Q8TAX7 377 aa3.65□□□□□ -1.82
EPHA4-202ENST00000409854 RMI2Q96E14 147 aa3.65□□□□□ -1.82
EPHA4-202ENST00000409854 PLECQ15149 4684 aaKnown RBP3.65□□□□□ -1.82
EPHA4-202ENST00000409854 BCE1O60756 84 aa3.65□□□□□ -1.83
EPHA4-202ENST00000409854 ATXN8Q156A1 80 aa3.65□□□□□ -1.83
EPHA4-202ENST00000409854 UBE2DNLQ8IWF7 75 aa3.65□□□□□ -1.83
EPHA4-202ENST00000409854 C6orf223Q8N319 242 aa3.65□□□□□ -1.83
EPHA4-202ENST00000409854 LYSTQ99698 3801 aa3.65□□□□□ -1.83
EPHA4-202ENST00000409854 TRBV10-2A0A0K0K1G8 114 aa3.65□□□□□ -1.83
EPHA4-202ENST00000409854 TCL1BO95988 128 aa3.65□□□□□ -1.83
EPHA4-202ENST00000409854 OXTP01178 125 aa3.65□□□□□ -1.83
EPHA4-202ENST00000409854 MIR7-3HGQ8N6C7 128 aa3.65□□□□□ -1.83
EPHA4-202ENST00000409854 Q9HAA7 133 aa3.65□□□□□ -1.83
EPHA4-202ENST00000409854 C10orf25Q5T742 122 aa3.64□□□□□ -1.83
EPHA4-202ENST00000409854 TRBV30A0A0K0K1B3 111 aa3.64□□□□□ -1.83
EPHA4-202ENST00000409854 LINC00158P58513 81 aa3.64□□□□□ -1.83
EPHA4-202ENST00000409854 RPL18AQ02543 176 aaKnown RBP3.64□□□□□ -1.83
EPHA4-202ENST00000409854 UNQ6190/PRO20217Q6UXQ8 127 aa3.64□□□□□ -1.83
EPHA4-202ENST00000409854 PRO1854Q9UHT4 67 aa3.64□□□□□ -1.83
EPHA4-202ENST00000409854 C6orf48Q9UBA6 75 aa3.64□□□□□ -1.83
EPHA4-202ENST00000409854 hADV29S1A0JD25 119 aa3.63□□□□□ -1.83
EPHA4-202ENST00000409854 FBN3Q75N90 2809 aa3.63□□□□□ -1.83
EPHA4-202ENST00000409854 NBDYA0A0U1RRE5 68 aa3.63□□□□□ -1.83
EPHA4-202ENST00000409854 HIGD2BQ4VC39 106 aa3.63□□□□□ -1.83
EPHA4-202ENST00000409854 CASC10Q5T4H9 136 aa3.63□□□□□ -1.83
EPHA4-202ENST00000409854 VPS13DQ5THJ4 4388 aa3.63□□□□□ -1.83
EPHA4-202ENST00000409854 C9orf116Q5BN46 136 aaPredicted RBP3.63□□□□□ -1.83
EPHA4-202ENST00000409854 WWC2-AS2Q96NR7 200 aa3.62□□□□□ -1.83
EPHA4-202ENST00000409854 CAMK2N2Q96S95 79 aa3.62□□□□□ -1.83
EPHA4-202ENST00000409854 DSCR8Q96T75 97 aa3.62□□□□□ -1.83
EPHA4-202ENST00000409854 BRK1Q8WUW1 75 aa3.62□□□□□ -1.83
EPHA4-202ENST00000409854 SND1-IT1Q9HBX3 110 aa3.62□□□□□ -1.83
EPHA4-202ENST00000409854 IGKV2-28A0A075B6P5 120 aa3.61□□□□□ -1.83
EPHA4-202ENST00000409854 NDUFC1O43677 76 aa3.61□□□□□ -1.83
EPHA4-202ENST00000409854 IGKV2D-28P01615 120 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms