RNA–Protein interactions for RNA: ENST00000409817.1

CXCR4-202, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS P3 BASIC

Gene CXCR4, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-202ENST00000409817 ANKRD29Q8N6D5 301 aa5.05□□□□□ -1.6
CXCR4-202ENST00000409817 PPDPFLQ8WWR9 84 aa5.05□□□□□ -1.6
CXCR4-202ENST00000409817 UBE2WQ96B02 151 aa5.05□□□□□ -1.6
CXCR4-202ENST00000409817 CARD19Q96LW7 228 aa5.05□□□□□ -1.6
CXCR4-202ENST00000409817 IGKV2-28A0A075B6P5 120 aa5.05□□□□□ -1.6
CXCR4-202ENST00000409817 F8WDY8 70 aa5.05□□□□□ -1.6
CXCR4-202ENST00000409817 IGKV2D-28P01615 120 aa5.05□□□□□ -1.6
CXCR4-202ENST00000409817 SERTAD4-AS1Q5TG53 156 aa5.05□□□□□ -1.6
CXCR4-202ENST00000409817 C2orf82Q6UX34 121 aa5.05□□□□□ -1.6
CXCR4-202ENST00000409817 MTURNQ8N3F0 131 aa5.05□□□□□ -1.6
CXCR4-202ENST00000409817 FBN1P35555 2871 aaKnown RBP5.05□□□□□ -1.6
CXCR4-202ENST00000409817 TRACP01848 142 aa5.04□□□□□ -1.6
CXCR4-202ENST00000409817 Q8N1X5 172 aa5.04□□□□□ -1.6
CXCR4-202ENST00000409817 LINC00337Q8N6G1 96 aa5.04□□□□□ -1.6
CXCR4-202ENST00000409817 H0YGX0 51 aa5.03□□□□□ -1.6
CXCR4-202ENST00000409817 DNAH10OSP0CZ25 163 aa5.03□□□□□ -1.6
CXCR4-202ENST00000409817 DEFB121Q5J5C9 76 aa5.03□□□□□ -1.6
CXCR4-202ENST00000409817 NTN5Q8WTR8 489 aaPredicted RBP5.03□□□□□ -1.6
CXCR4-202ENST00000409817 CLEC2BQ92478 149 aa5.03□□□□□ -1.6
CXCR4-202ENST00000409817 COL6A5A8TX70 2615 aa5.02□□□□□ -1.61
CXCR4-202ENST00000409817 LCE4AQ5TA78 99 aa5.02□□□□□ -1.61
CXCR4-202ENST00000409817 C2orf48Q96LS8 159 aa5.02□□□□□ -1.61
CXCR4-202ENST00000409817 DNAH3Q8TD57 4116 aa5.01□□□□□ -1.61
CXCR4-202ENST00000409817 LCE1DQ5T752 114 aa5.01□□□□□ -1.61
CXCR4-202ENST00000409817 KRTAP26-1Q6PEX3 210 aa5.01□□□□□ -1.61
CXCR4-202ENST00000409817 TMEM126AQ9H061 195 aa5.01□□□□□ -1.61
CXCR4-202ENST00000409817 KRTAP9-7A8MTY7 169 aa5□□□□□ -1.61
CXCR4-202ENST00000409817 PRB2P02812 416 aaPredicted RBP5□□□□□ -1.61
CXCR4-202ENST00000409817 KRTAP5-3Q6L8H2 238 aa5□□□□□ -1.61
CXCR4-202ENST00000409817 UNQ6190/PRO20217Q6UXQ8 127 aa5□□□□□ -1.61
CXCR4-202ENST00000409817 SMIM11BQ8TCY0 68 aa5□□□□□ -1.61
CXCR4-202ENST00000409817 CMYA5Q8N3K9 4069 aa5□□□□□ -1.61
CXCR4-202ENST00000409817 A0A1B0GX51 115 aa5□□□□□ -1.61
CXCR4-202ENST00000409817 OR13C6PQ8NH95 151 aa5□□□□□ -1.61
CXCR4-202ENST00000409817 MRAPQ8TCY5 172 aa5□□□□□ -1.61
CXCR4-202ENST00000409817 UPK3BQ9BT76 320 aa5□□□□□ -1.61
CXCR4-202ENST00000409817 C6orf223Q8N319 242 aa4.99□□□□□ -1.61
CXCR4-202ENST00000409817 RMI2Q96E14 147 aa4.99□□□□□ -1.61
CXCR4-202ENST00000409817 DNAL4O96015 105 aa4.98□□□□□ -1.61
CXCR4-202ENST00000409817 C9orf116Q5BN46 136 aaPredicted RBP4.98□□□□□ -1.61
CXCR4-202ENST00000409817 C10orf25Q5T742 122 aa4.98□□□□□ -1.61
CXCR4-202ENST00000409817 CAMK2N2Q96S95 79 aa4.98□□□□□ -1.61
CXCR4-202ENST00000409817 C6orf48Q9UBA6 75 aa4.98□□□□□ -1.61
CXCR4-202ENST00000409817 IGKV2D-24A0A075B6R9 120 aa4.98□□□□□ -1.61
CXCR4-202ENST00000409817 SNCGO76070 127 aa4.98□□□□□ -1.61
CXCR4-202ENST00000409817 C15orf56Q8N910 161 aa4.98□□□□□ -1.61
CXCR4-202ENST00000409817 B9D2Q9BPU9 175 aa4.98□□□□□ -1.61
CXCR4-202ENST00000409817 LINC00588Q9Y4M8 146 aa4.98□□□□□ -1.61
CXCR4-202ENST00000409817 NOTCH1P46531 2555 aa4.97□□□□□ -1.61
CXCR4-202ENST00000409817 PKD1L1Q8TDX9 2849 aa4.97□□□□□ -1.61
CXCR4-202ENST00000409817 BAALC-AS2P0C853 105 aa4.96□□□□□ -1.61
CXCR4-202ENST00000409817 S100A7L2Q5SY68 101 aa4.96□□□□□ -1.61
CXCR4-202ENST00000409817 FAM218AQ96MZ4 157 aa4.96□□□□□ -1.61
CXCR4-202ENST00000409817 SIGMAR1Q99720 223 aa4.96□□□□□ -1.61
CXCR4-202ENST00000409817 ANK2Q01484 3957 aa4.96□□□□□ -1.62
CXCR4-202ENST00000409817 TENM3Q9P273 2699 aa4.96□□□□□ -1.62
CXCR4-202ENST00000409817 TEX49A0A1B0GTD5 131 aa4.96□□□□□ -1.62
CXCR4-202ENST00000409817 FAM240AA0A1B0GVK7 77 aa4.96□□□□□ -1.62
CXCR4-202ENST00000409817 USP17L23D6RBM5 183 aa4.96□□□□□ -1.62
CXCR4-202ENST00000409817 NDUFC2-KCTD14E9PQ53 114 aa4.96□□□□□ -1.62
CXCR4-202ENST00000409817 HIGD2BQ4VC39 106 aa4.96□□□□□ -1.62
CXCR4-202ENST00000409817 LINC00526Q96FQ7 95 aa4.96□□□□□ -1.62
CXCR4-202ENST00000409817 IGLV6-57P01721 117 aa4.95□□□□□ -1.62
CXCR4-202ENST00000409817 INAFM2P0DMQ5 153 aa4.95□□□□□ -1.62
CXCR4-202ENST00000409817 ACYP1P07311 99 aa4.94□□□□□ -1.62
CXCR4-202ENST00000409817 SYCNQ0VAF6 134 aa4.94□□□□□ -1.62
CXCR4-202ENST00000409817 Q6ZRU5 148 aa4.94□□□□□ -1.62
CXCR4-202ENST00000409817 MGAM2Q2M2H8 2515 aa4.94□□□□□ -1.62
CXCR4-202ENST00000409817 A0A087WYN8 130 aa4.94□□□□□ -1.62
CXCR4-202ENST00000409817 NCR3O14931 201 aa4.94□□□□□ -1.62
CXCR4-202ENST00000409817 TLX1NBP0CAT3 122 aa4.94□□□□□ -1.62
CXCR4-202ENST00000409817 SCGB1A1P11684 91 aa4.94□□□□□ -1.62
CXCR4-202ENST00000409817 PRR3P79522 188 aaKnown RBP4.94□□□□□ -1.62
CXCR4-202ENST00000409817 LINC00167Q96N53 147 aa4.94□□□□□ -1.62
CXCR4-202ENST00000409817 Q9HAA7 133 aa4.94□□□□□ -1.62
CXCR4-202ENST00000409817 H3BQ85 93 aa4.93□□□□□ -1.62
CXCR4-202ENST00000409817 LECT2O14960 151 aa4.93□□□□□ -1.62
CXCR4-202ENST00000409817 ORMDL1Q9P0S3 153 aa4.93□□□□□ -1.62
CXCR4-202ENST00000409817 NBEAL1Q6ZS30 2694 aa4.92□□□□□ -1.62
CXCR4-202ENST00000409817 TRBV7-6A0A0J9YX20 115 aa4.92□□□□□ -1.62
CXCR4-202ENST00000409817 RPL18AQ02543 176 aaKnown RBP4.92□□□□□ -1.62
CXCR4-202ENST00000409817 C6orf99Q4VX62 202 aa4.92□□□□□ -1.62
CXCR4-202ENST00000409817 Q8N814 137 aa4.92□□□□□ -1.62
CXCR4-202ENST00000409817 Q8NDZ9 215 aa4.92□□□□□ -1.62
CXCR4-202ENST00000409817 M0R378 163 aa4.92□□□□□ -1.62
CXCR4-202ENST00000409817 VPREB1P12018 145 aa4.92□□□□□ -1.62
CXCR4-202ENST00000409817 KRTAP4-9Q9BYQ8 210 aa4.92□□□□□ -1.62
CXCR4-202ENST00000409817 XAGE1AQ9HD64 81 aa4.92□□□□□ -1.62
CXCR4-202ENST00000409817 HUWE1Q7Z6Z7 4374 aaKnown RBP4.91□□□□□ -1.62
CXCR4-202ENST00000409817 TRAV23DV6A0A075B6W5 121 aa4.91□□□□□ -1.62
CXCR4-202ENST00000409817 NUPR2A6NF83 97 aa4.91□□□□□ -1.62
CXCR4-202ENST00000409817 TMEM256-PLSCR3K7ERE1 68 aa4.91□□□□□ -1.62
CXCR4-202ENST00000409817 DIRC1Q969H9 104 aa4.91□□□□□ -1.62
CXCR4-202ENST00000409817 KRTAP4-2Q9BYR5 136 aa4.91□□□□□ -1.62
CXCR4-202ENST00000409817 APLNQ9ULZ1 77 aa4.91□□□□□ -1.62
CXCR4-202ENST00000409817 LINC00575Q6W349 94 aa4.9□□□□□ -1.62
CXCR4-202ENST00000409817 OBSCN-AS1Q96MR7 158 aa4.9□□□□□ -1.62
CXCR4-202ENST00000409817 C22orf24Q9Y442 160 aa4.9□□□□□ -1.62
CXCR4-202ENST00000409817 TRBV10-3A0A0K0K1G6 114 aa4.9□□□□□ -1.63
CXCR4-202ENST00000409817 JMJD7-PLA2G4BH0Y9G9 81 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms