RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 COX6CP09669 75 aa-0.75□□□□□ -2.53
PMS1-203ENST00000409593 MEIG1Q5JSS6 88 aa-0.75□□□□□ -2.53
PMS1-203ENST00000409593 PFDN5Q99471 154 aa-0.75□□□□□ -2.53
PMS1-203ENST00000409593 TEX15Q9BXT5 2789 aa-0.76□□□□□ -2.53
PMS1-203ENST00000409593 C5P01031 1676 aa-0.76□□□□□ -2.53
PMS1-203ENST00000409593 CUL7Q14999 1698 aa-0.76□□□□□ -2.53
PMS1-203ENST00000409593 A0A087WVE0 104 aa-0.76□□□□□ -2.53
PMS1-203ENST00000409593 SPTY2D1-AS1A0A0U1RR47 76 aa-0.76□□□□□ -2.53
PMS1-203ENST00000409593 H0YAA0 97 aa-0.76□□□□□ -2.53
PMS1-203ENST00000409593 GNG7O60262 68 aa-0.76□□□□□ -2.53
PMS1-203ENST00000409593 Q0VG73 95 aa-0.76□□□□□ -2.53
PMS1-203ENST00000409593 C8orf59Q8N0T1 100 aaPredicted RBP-0.76□□□□□ -2.53
PMS1-203ENST00000409593 MYH7P12883 1935 aa-0.76□□□□□ -2.53
PMS1-203ENST00000409593 KNDC1Q76NI1 1749 aa-0.77□□□□□ -2.53
PMS1-203ENST00000409593 DMXL1Q9Y485 3027 aa-0.77□□□□□ -2.53
PMS1-203ENST00000409593 K7EP34 96 aa-0.77□□□□□ -2.53
PMS1-203ENST00000409593 TRAPPC2P0DI81 140 aa-0.77□□□□□ -2.53
PMS1-203ENST00000409593 TRAPPC2BP0DI82 140 aa-0.77□□□□□ -2.53
PMS1-203ENST00000409593 ATP5EP56381 51 aaPredicted RBP-0.77□□□□□ -2.53
PMS1-203ENST00000409593 CATR1Q13166 79 aa-0.77□□□□□ -2.53
PMS1-203ENST00000409593 Q56UQ5 140 aa-0.77□□□□□ -2.53
PMS1-203ENST00000409593 LINC00470Q9BZP3 86 aa-0.77□□□□□ -2.53
PMS1-203ENST00000409593 TOPAZ1Q8N9V7 1692 aa-0.77□□□□□ -2.53
PMS1-203ENST00000409593 CHD1O14646 1710 aa-0.77□□□□□ -2.53
PMS1-203ENST00000409593 QSER1Q2KHR3 1735 aa-0.77□□□□□ -2.53
PMS1-203ENST00000409593 MON2Q7Z3U7 1717 aa-0.77□□□□□ -2.53
PMS1-203ENST00000409593 A0A0G2JND7 137 aa-0.78□□□□□ -2.53
PMS1-203ENST00000409593 F6UZH7 168 aa-0.78□□□□□ -2.53
PMS1-203ENST00000409593 H0Y9P7 68 aa-0.78□□□□□ -2.53
PMS1-203ENST00000409593 H3BQF6 201 aa-0.78□□□□□ -2.53
PMS1-203ENST00000409593 DEFB1P60022 68 aa-0.78□□□□□ -2.53
PMS1-203ENST00000409593 PDCD11Q14690 1871 aaKnown RBP-0.78□□□□□ -2.53
PMS1-203ENST00000409593 KRTAP19-5Q3LI72 72 aa-0.78□□□□□ -2.53
PMS1-203ENST00000409593 SAMD9Q5K651 1589 aa-0.78□□□□□ -2.53
PMS1-203ENST00000409593 SFTA2Q6UW10 78 aa-0.78□□□□□ -2.53
PMS1-203ENST00000409593 KTN1Q86UP2 1357 aaKnown RBP-0.78□□□□□ -2.53
PMS1-203ENST00000409593 PP6455Q8WZ26 134 aa-0.78□□□□□ -2.53
PMS1-203ENST00000409593 SCAPERQ9BY12 1400 aa-0.78□□□□□ -2.53
PMS1-203ENST00000409593 MANBALQ9NQG1 85 aa-0.78□□□□□ -2.53
PMS1-203ENST00000409593 PRO1854Q9UHT4 67 aa-0.78□□□□□ -2.53
PMS1-203ENST00000409593 S4R3F8 94 aa-0.78□□□□□ -2.53
PMS1-203ENST00000409593 SACSQ9NZJ4 4579 aa-0.78□□□□□ -2.53
PMS1-203ENST00000409593 ACACAQ13085 2346 aa-0.78□□□□□ -2.53
PMS1-203ENST00000409593 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.78□□□□□ -2.53
PMS1-203ENST00000409593 PLXNC1O60486 1568 aa-0.78□□□□□ -2.53
PMS1-203ENST00000409593 DYNC1H1Q14204 4646 aaKnown RBP-0.78□□□□□ -2.53
PMS1-203ENST00000409593 ZZEF1O43149 2961 aa-0.78□□□□□ -2.53
PMS1-203ENST00000409593 GCN1Q92616 2671 aaKnown RBP-0.78□□□□□ -2.53
PMS1-203ENST00000409593 TRBV7-7A0A0K0K1E9 115 aa-0.78□□□□□ -2.53
PMS1-203ENST00000409593 UBE2L5PA0A1B0GUS4 154 aa-0.78□□□□□ -2.53
PMS1-203ENST00000409593 GNG11P61952 73 aa-0.78□□□□□ -2.53
PMS1-203ENST00000409593 UBE2L3P68036 154 aaKnown RBP-0.78□□□□□ -2.53
PMS1-203ENST00000409593 DEFB110Q30KQ9 67 aa-0.78□□□□□ -2.53
PMS1-203ENST00000409593 C12orf57Q99622 126 aa-0.78□□□□□ -2.53
PMS1-203ENST00000409593 MTORP42345 2549 aa-0.78□□□□□ -2.53
PMS1-203ENST00000409593 TRANK1O15050 2925 aa-0.79□□□□□ -2.54
PMS1-203ENST00000409593 LYSTQ99698 3801 aa-0.79□□□□□ -2.54
PMS1-203ENST00000409593 CC2D2AQ9P2K1 1620 aa-0.79□□□□□ -2.54
PMS1-203ENST00000409593 CUBNO60494 3623 aa-0.79□□□□□ -2.54
PMS1-203ENST00000409593 DNAH1Q9P2D7 4330 aa-0.79□□□□□ -2.54
PMS1-203ENST00000409593 ABCC5O15440 1437 aa-0.79□□□□□ -2.54
PMS1-203ENST00000409593 NAIPQ13075 1403 aa-0.79□□□□□ -2.54
PMS1-203ENST00000409593 NAP1L6A6NFF2 107 aa-0.79□□□□□ -2.54
PMS1-203ENST00000409593 NDUFA2O43678 99 aa-0.79□□□□□ -2.54
PMS1-203ENST00000409593 APOC2P02655 101 aa-0.79□□□□□ -2.54
PMS1-203ENST00000409593 MT1HL1P0DM35 61 aa-0.79□□□□□ -2.54
PMS1-203ENST00000409593 FGF7P21781 194 aa-0.79□□□□□ -2.54
PMS1-203ENST00000409593 GNGT1P63211 74 aa-0.79□□□□□ -2.54
PMS1-203ENST00000409593 SELENOWP63302 87 aa-0.79□□□□□ -2.54
PMS1-203ENST00000409593 DEFB107AQ8IZN7 70 aa-0.79□□□□□ -2.54
PMS1-203ENST00000409593 PAIP2BQ9ULR5 123 aaKnown RBP-0.79□□□□□ -2.54
PMS1-203ENST00000409593 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.79□□□□□ -2.542e-12■■■■■ 43
PMS1-203ENST00000409593 ARHGAP5Q13017 1502 aa-0.8□□□□□ -2.54
PMS1-203ENST00000409593 RGPD8O14715 1765 aaPredicted RBP-0.8□□□□□ -2.54
PMS1-203ENST00000409593 RGPD5Q99666 1765 aa-0.8□□□□□ -2.54
PMS1-203ENST00000409593 SCN11AQ9UI33 1791 aa-0.8□□□□□ -2.54
PMS1-203ENST00000409593 UNC13AQ9UPW8 1703 aa-0.8□□□□□ -2.54
PMS1-203ENST00000409593 OOSP1A8MZH6 123 aa-0.8□□□□□ -2.54
PMS1-203ENST00000409593 FAM25AB3EWG3 89 aa-0.8□□□□□ -2.54
PMS1-203ENST00000409593 FAM25CB3EWG5 89 aa-0.8□□□□□ -2.54
PMS1-203ENST00000409593 FAM25GB3EWG6 89 aa-0.8□□□□□ -2.54
PMS1-203ENST00000409593 H7BZZ5 65 aa-0.8□□□□□ -2.54
PMS1-203ENST00000409593 HSD52Q0P140 79 aa-0.8□□□□□ -2.54
PMS1-203ENST00000409593 NMSQ5H8A3 153 aa-0.8□□□□□ -2.54
PMS1-203ENST00000409593 ZNF436-AS1Q8NC38 126 aaPredicted RBP-0.8□□□□□ -2.54
PMS1-203ENST00000409593 PSENENQ9NZ42 101 aa-0.8□□□□□ -2.54
PMS1-203ENST00000409593 ANKRD36A6QL64 1941 aa-0.8□□□□□ -2.54
PMS1-203ENST00000409593 CMYA5Q8N3K9 4069 aa-0.8□□□□□ -2.54
PMS1-203ENST00000409593 USP32Q8NFA0 1604 aa-0.81□□□□□ -2.54
PMS1-203ENST00000409593 ARMS2P0C7Q2 107 aa-0.81□□□□□ -2.54
PMS1-203ENST00000409593 MT1XP80297 61 aa-0.81□□□□□ -2.54
PMS1-203ENST00000409593 COX6B2Q6YFQ2 88 aa-0.81□□□□□ -2.54
PMS1-203ENST00000409593 VAMP8Q9BV40 100 aa-0.81□□□□□ -2.54
PMS1-203ENST00000409593 NRKQ7Z2Y5 1582 aa-0.81□□□□□ -2.54
PMS1-203ENST00000409593 TRIOO75962 3097 aa-0.81□□□□□ -2.54
PMS1-203ENST00000409593 FAM135AQ9P2D6 1515 aa-0.81□□□□□ -2.54
PMS1-203ENST00000409593 MYOM2P54296 1465 aa-0.81□□□□□ -2.54
PMS1-203ENST00000409593 LRRC9Q6ZRR7 1453 aa-0.81□□□□□ -2.54
PMS1-203ENST00000409593 MAGI2Q86UL8 1455 aa-0.81□□□□□ -2.54
PMS1-203ENST00000409593 SPHKAPQ2M3C7 1700 aa-0.81□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms