RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 KRTAP1-1Q07627 177 aa11.51□□□□□ -0.57
PCDHA13-202ENST00000409494 LINC00588Q9Y4M8 146 aa11.51□□□□□ -0.57
PCDHA13-202ENST00000409494 BRK1Q8WUW1 75 aa11.5□□□□□ -0.57
PCDHA13-202ENST00000409494 LIMD2Q9BT23 127 aa11.5□□□□□ -0.57
PCDHA13-202ENST00000409494 GVQW2A0A096LPI5 108 aaPredicted RBP11.49□□□□□ -0.57
PCDHA13-202ENST00000409494 LINC00846Q9NV44 126 aa11.49□□□□□ -0.57
PCDHA13-202ENST00000409494 TRAV7A0A075B6U4 112 aa11.49□□□□□ -0.57
PCDHA13-202ENST00000409494 A0A1B0GW54 56 aa11.48□□□□□ -0.57
PCDHA13-202ENST00000409494 K7EIL1 84 aa11.48□□□□□ -0.57
PCDHA13-202ENST00000409494 C6orf48Q9UBA6 75 aa11.48□□□□□ -0.57
PCDHA13-202ENST00000409494 LINC00612Q8N6U2 182 aa11.47□□□□□ -0.57
PCDHA13-202ENST00000409494 MPLKIPQ8TAP9 179 aa11.47□□□□□ -0.57
PCDHA13-202ENST00000409494 A0A0C4DFX4 3053 aa11.46□□□□□ -0.57
PCDHA13-202ENST00000409494 SOSTDC1Q6X4U4 206 aa11.46□□□□□ -0.58
PCDHA13-202ENST00000409494 HRCT1Q6UXD1 115 aa11.46□□□□□ -0.58
PCDHA13-202ENST00000409494 CIRBP-AS1Q8TBR5 109 aa11.45□□□□□ -0.58
PCDHA13-202ENST00000409494 SMCR5Q8TEV8 140 aa11.45□□□□□ -0.58
PCDHA13-202ENST00000409494 C16orf90A8MZG2 172 aa11.43□□□□□ -0.58
PCDHA13-202ENST00000409494 WFDC13Q8IUB5 93 aa11.43□□□□□ -0.58
PCDHA13-202ENST00000409494 LINC00167Q96N53 147 aa11.43□□□□□ -0.58
PCDHA13-202ENST00000409494 HELZ2Q9BYK8 2649 aaKnown RBP11.42□□□□□ -0.58
PCDHA13-202ENST00000409494 RANBP2P49792 3224 aaKnown RBP11.42□□□□□ -0.58
PCDHA13-202ENST00000409494 LITAFQ99732 161 aa11.41□□□□□ -0.58
PCDHA13-202ENST00000409494 KRTAP10-11P60412 298 aa11.41□□□□□ -0.58
PCDHA13-202ENST00000409494 TM2D3Q9BRN9 247 aa11.41□□□□□ -0.58
PCDHA13-202ENST00000409494 KRTAP10-3P60369 221 aa11.4□□□□□ -0.58
PCDHA13-202ENST00000409494 Q8N3U1 123 aa11.4□□□□□ -0.58
PCDHA13-202ENST00000409494 FAM218AQ96MZ4 157 aa11.4□□□□□ -0.58
PCDHA13-202ENST00000409494 RTL8CO15255 209 aa11.38□□□□□ -0.59
PCDHA13-202ENST00000409494 Q6ZVQ6 151 aa11.38□□□□□ -0.59
PCDHA13-202ENST00000409494 TRANK1O15050 2925 aa11.38□□□□□ -0.59
PCDHA13-202ENST00000409494 Q6ZRP5 223 aa11.37□□□□□ -0.59
PCDHA13-202ENST00000409494 Q8N9L7 120 aa11.37□□□□□ -0.59
PCDHA13-202ENST00000409494 FAM229AH3BQW9 127 aa11.37□□□□□ -0.59
PCDHA13-202ENST00000409494 PRLHP81277 87 aa11.37□□□□□ -0.59
PCDHA13-202ENST00000409494 GIG44P09565 113 aaPredicted RBP11.36□□□□□ -0.59
PCDHA13-202ENST00000409494 SMIM26A0A096LP01 95 aa11.36□□□□□ -0.59
PCDHA13-202ENST00000409494 A0A087WSZ3 146 aa11.36□□□□□ -0.59
PCDHA13-202ENST00000409494 SPTSSBQ8NFR3 76 aa11.35□□□□□ -0.59
PCDHA13-202ENST00000409494 PRR34Q9NV39 138 aa11.35□□□□□ -0.59
PCDHA13-202ENST00000409494 SERP1Q9Y6X1 66 aa11.35□□□□□ -0.59
PCDHA13-202ENST00000409494 FAM30AQ9NZY2 134 aa11.34□□□□□ -0.59
PCDHA13-202ENST00000409494 V9GYY9 64 aa11.34□□□□□ -0.59
PCDHA13-202ENST00000409494 ELOF1P60002 83 aaKnown RBP11.34□□□□□ -0.59
PCDHA13-202ENST00000409494 LINC01547P58512 204 aaPredicted RBP11.34□□□□□ -0.59
PCDHA13-202ENST00000409494 WIPF1O43516 503 aa11.31□□□□□ -0.6
PCDHA13-202ENST00000409494 Q6ZRX8 168 aa11.31□□□□□ -0.6
PCDHA13-202ENST00000409494 PRR15LQ9BU68 103 aa11.3□□□□□ -0.6
PCDHA13-202ENST00000409494 PRR4Q16378 134 aa11.3□□□□□ -0.6
PCDHA13-202ENST00000409494 CXCL6P80162 114 aa11.29□□□□□ -0.6
PCDHA13-202ENST00000409494 MKI67P46013 3256 aaKnown RBP11.28□□□□□ -0.6
PCDHA13-202ENST00000409494 CRYGAP11844 174 aa11.28□□□□□ -0.6
PCDHA13-202ENST00000409494 FLNAP21333 2647 aaKnown RBP11.28□□□□□ -0.6
PCDHA13-202ENST00000409494 KIAA0087Q14695 138 aa11.28□□□□□ -0.6
PCDHA13-202ENST00000409494 IGHV6-1A0A0B4J1U7 121 aa11.27□□□□□ -0.61
PCDHA13-202ENST00000409494 BCE1O60756 84 aa11.27□□□□□ -0.61
PCDHA13-202ENST00000409494 A0A0U1RQV1 116 aa11.26□□□□□ -0.61
PCDHA13-202ENST00000409494 Q8NBF4 154 aa11.25□□□□□ -0.61
PCDHA13-202ENST00000409494 ITPR3Q14573 2671 aa11.25□□□□□ -0.61
PCDHA13-202ENST00000409494 TMEM254Q8TBM7 123 aa11.24□□□□□ -0.61
PCDHA13-202ENST00000409494 K7ERS5 55 aa11.24□□□□□ -0.61
PCDHA13-202ENST00000409494 PLA2G1BP04054 148 aaKnown RBP11.24□□□□□ -0.61
PCDHA13-202ENST00000409494 LAMA3Q16787 3333 aa11.23□□□□□ -0.61
PCDHA13-202ENST00000409494 ZNF292O60281 2723 aa11.23□□□□□ -0.61
PCDHA13-202ENST00000409494 VPREB1P12018 145 aa11.23□□□□□ -0.61
PCDHA13-202ENST00000409494 EIF4EBP3O60516 100 aaPredicted RBP11.23□□□□□ -0.61
PCDHA13-202ENST00000409494 LAMA2P24043 3122 aaKnown RBP11.22□□□□□ -0.61
PCDHA13-202ENST00000409494 LINC00336Q6ZUF6 198 aa11.22□□□□□ -0.61
PCDHA13-202ENST00000409494 PHF5AQ7RTV0 110 aaKnown RBP11.22□□□□□ -0.61
PCDHA13-202ENST00000409494 MGAM2Q2M2H8 2515 aa11.21□□□□□ -0.62
PCDHA13-202ENST00000409494 IGLV6-57P01721 117 aa11.21□□□□□ -0.62
PCDHA13-202ENST00000409494 TLX1NBP0CAT3 122 aa11.2□□□□□ -0.62
PCDHA13-202ENST00000409494 ZNF575Q86XF7 245 aa11.2□□□□□ -0.62
PCDHA13-202ENST00000409494 LINC00208Q96KT6 92 aa11.2□□□□□ -0.62
PCDHA13-202ENST00000409494 HCG22E2RYF7 251 aa11.2□□□□□ -0.62
PCDHA13-202ENST00000409494 EPM2AB3EWF7 344 aa11.19□□□□□ -0.62
PCDHA13-202ENST00000409494 LOC110117498A0A087WWA1 95 aa11.18□□□□□ -0.62
PCDHA13-202ENST00000409494 Q6ZQT0 140 aa11.18□□□□□ -0.62
PCDHA13-202ENST00000409494 PLA2G2DQ9UNK4 145 aa11.18□□□□□ -0.62
PCDHA13-202ENST00000409494 MOBPQ13875 183 aa11.18□□□□□ -0.62
PCDHA13-202ENST00000409494 TP53AIP1Q9HCN2 124 aa11.18□□□□□ -0.62
PCDHA13-202ENST00000409494 CFAP46Q8IYW2 2715 aa11.18□□□□□ -0.62
PCDHA13-202ENST00000409494 KCNQ1DNQ9H478 68 aa11.18□□□□□ -0.62
PCDHA13-202ENST00000409494 BRCA2P51587 3418 aa11.17□□□□□ -0.62
PCDHA13-202ENST00000409494 C9orf163Q8N9P6 203 aa11.17□□□□□ -0.62
PCDHA13-202ENST00000409494 APLNQ9ULZ1 77 aa11.16□□□□□ -0.62
PCDHA13-202ENST00000409494 CFAP54Q96N23 3096 aa11.15□□□□□ -0.62
PCDHA13-202ENST00000409494 IGLV1-50A0A075B6I6 118 aa11.13□□□□□ -0.63
PCDHA13-202ENST00000409494 A0A087WTM6 91 aa11.13□□□□□ -0.63
PCDHA13-202ENST00000409494 TYMSOSQ8TAI1 123 aa11.13□□□□□ -0.63
PCDHA13-202ENST00000409494 RPS28P62857 69 aaKnown RBP11.13□□□□□ -0.63
PCDHA13-202ENST00000409494 C15orf56Q8N910 161 aa11.12□□□□□ -0.63
PCDHA13-202ENST00000409494 USP24Q9UPU5 2620 aa11.12□□□□□ -0.63
PCDHA13-202ENST00000409494 ATRQ13535 2644 aa11.12□□□□□ -0.63
PCDHA13-202ENST00000409494 LINC00476Q8WZB0 136 aa11.12□□□□□ -0.63
PCDHA13-202ENST00000409494 hDV103S1A0JD37 113 aa11.11□□□□□ -0.63
PCDHA13-202ENST00000409494 RPL37AP61513 92 aaKnown RBP11.1□□□□□ -0.63
PCDHA13-202ENST00000409494 TRBV7-4A0A0J9YYF1 115 aa11.1□□□□□ -0.63
PCDHA13-202ENST00000409494 A6NED7 52 aa11.1□□□□□ -0.63
PCDHA13-202ENST00000409494 CNBPP62633 177 aaKnown RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms