RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 LY6G6CO95867 125 aa9.16□□□□□ -0.94
GPNMB-203ENST00000409458 SPCS1Q9Y6A9 102 aa9.16□□□□□ -0.94
GPNMB-203ENST00000409458 NDUFC2-KCTD14E9PQ53 114 aa9.16□□□□□ -0.94
GPNMB-203ENST00000409458 C3orf84H3BNL1 204 aa9.16□□□□□ -0.94
GPNMB-203ENST00000409458 K7EP34 96 aa9.16□□□□□ -0.94
GPNMB-203ENST00000409458 Q6ZR54 194 aa9.16□□□□□ -0.94
GPNMB-203ENST00000409458 LINC00476Q8WZB0 136 aa9.16□□□□□ -0.94
GPNMB-203ENST00000409458 XAGE1AQ9HD64 81 aa9.16□□□□□ -0.94
GPNMB-203ENST00000409458 TRAV13-2A0A0B4J235 113 aa9.15□□□□□ -0.94
GPNMB-203ENST00000409458 NDUFC2O95298 119 aa9.15□□□□□ -0.94
GPNMB-203ENST00000409458 PRR3P79522 188 aaKnown RBP9.15□□□□□ -0.94
GPNMB-203ENST00000409458 RNF151Q2KHN1 245 aa9.15□□□□□ -0.94
GPNMB-203ENST00000409458 Q6ZRP5 223 aa9.15□□□□□ -0.94
GPNMB-203ENST00000409458 LRCOL1A6NCL2 159 aa9.14□□□□□ -0.95
GPNMB-203ENST00000409458 TRIAP1O43715 76 aa9.14□□□□□ -0.95
GPNMB-203ENST00000409458 PSMB2P49721 201 aa9.14□□□□□ -0.95
GPNMB-203ENST00000409458 GAGE10A6NGK3 116 aa9.13□□□□□ -0.95
GPNMB-203ENST00000409458 UBE2V1Q13404 147 aa9.13□□□□□ -0.95
GPNMB-203ENST00000409458 GAGE2EQ4V326 116 aa9.13□□□□□ -0.95
GPNMB-203ENST00000409458 GAGE2DQ9UEU5 116 aa9.13□□□□□ -0.95
GPNMB-203ENST00000409458 HYDINQ4G0P3 5121 aa9.13□□□□□ -0.95
GPNMB-203ENST00000409458 NCR3O14931 201 aa9.13□□□□□ -0.95
GPNMB-203ENST00000409458 TLX1NBP0CAT3 122 aa9.13□□□□□ -0.95
GPNMB-203ENST00000409458 RPL18AQ02543 176 aaKnown RBP9.12□□□□□ -0.95
GPNMB-203ENST00000409458 C14orf177Q52M58 125 aa9.12□□□□□ -0.95
GPNMB-203ENST00000409458 GTF2H5Q6ZYL4 71 aa9.12□□□□□ -0.95
GPNMB-203ENST00000409458 CNBPP62633 177 aaKnown RBP9.11□□□□□ -0.95
GPNMB-203ENST00000409458 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.1□□□□□ -0.95
GPNMB-203ENST00000409458 SCGB1C2P0DMR2 95 aa9.1□□□□□ -0.95
GPNMB-203ENST00000409458 C9orf129Q5T035 196 aaKnown RBP9.1□□□□□ -0.95
GPNMB-203ENST00000409458 LYRM7Q5U5X0 104 aa9.1□□□□□ -0.95
GPNMB-203ENST00000409458 OR13C6PQ8NH95 151 aa9.1□□□□□ -0.95
GPNMB-203ENST00000409458 FRAS1Q86XX4 4008 aa9.09□□□□□ -0.95
GPNMB-203ENST00000409458 TCL1BO95988 128 aa9.09□□□□□ -0.95
GPNMB-203ENST00000409458 DNAH17Q9UFH2 4485 aa9.09□□□□□ -0.95
GPNMB-203ENST00000409458 VPREB1P12018 145 aa9.08□□□□□ -0.96
GPNMB-203ENST00000409458 SMIM11BQ8TCY0 68 aa9.08□□□□□ -0.96
GPNMB-203ENST00000409458 LOC107984640A0A0U1RRK4 108 aa9.07□□□□□ -0.96
GPNMB-203ENST00000409458 H3BMG7 143 aa9.07□□□□□ -0.96
GPNMB-203ENST00000409458 RPL28P46779 137 aaKnown RBP9.07□□□□□ -0.96
GPNMB-203ENST00000409458 Q8N814 137 aa9.07□□□□□ -0.96
GPNMB-203ENST00000409458 A0A087WTM6 91 aa9.06□□□□□ -0.96
GPNMB-203ENST00000409458 TRBV10-2A0A0K0K1G8 114 aa9.06□□□□□ -0.96
GPNMB-203ENST00000409458 GAGE2BQ13066 116 aa9.06□□□□□ -0.96
GPNMB-203ENST00000409458 C1orf134Q5TEV5 83 aa9.06□□□□□ -0.96
GPNMB-203ENST00000409458 HECTD4Q9Y4D8 3996 aa9.05□□□□□ -0.96
GPNMB-203ENST00000409458 TRBV20-1A0A075B6N2 111 aa9.05□□□□□ -0.96
GPNMB-203ENST00000409458 COX6CP09669 75 aa9.05□□□□□ -0.96
GPNMB-203ENST00000409458 S100A7L2Q5SY68 101 aa9.05□□□□□ -0.96
GPNMB-203ENST00000409458 SERTAD4-AS1Q5TG53 156 aa9.05□□□□□ -0.96
GPNMB-203ENST00000409458 CLEC2BQ92478 149 aa9.05□□□□□ -0.96
GPNMB-203ENST00000409458 TMEM126AQ9H061 195 aa9.05□□□□□ -0.96
GPNMB-203ENST00000409458 SACSQ9NZJ4 4579 aa9.05□□□□□ -0.96
GPNMB-203ENST00000409458 IGLV6-57P01721 117 aa9.04□□□□□ -0.96
GPNMB-203ENST00000409458 A0A096LNI7 61 aa9.03□□□□□ -0.96
GPNMB-203ENST00000409458 FAM168BA1KXE4 195 aa9.03□□□□□ -0.96
GPNMB-203ENST00000409458 MTURNQ8N3F0 131 aa9.03□□□□□ -0.96
GPNMB-203ENST00000409458 TRBV10-3A0A0K0K1G6 114 aa9.02□□□□□ -0.97
GPNMB-203ENST00000409458 ATXN8Q156A1 80 aa9.02□□□□□ -0.97
GPNMB-203ENST00000409458 PLA2G2DQ9UNK4 145 aa9.02□□□□□ -0.97
GPNMB-203ENST00000409458 M0R378 163 aa9.01□□□□□ -0.97
GPNMB-203ENST00000409458 C9orf163Q8N9P6 203 aa9.01□□□□□ -0.97
GPNMB-203ENST00000409458 C16orf90A8MZG2 172 aa9□□□□□ -0.97
GPNMB-203ENST00000409458 LST1O00453 97 aa9□□□□□ -0.97
GPNMB-203ENST00000409458 LINC01620Q4KN68 170 aa9□□□□□ -0.97
GPNMB-203ENST00000409458 KRTAP7-1Q8IUC3 87 aa9□□□□□ -0.97
GPNMB-203ENST00000409458 FAM218AQ96MZ4 157 aa9□□□□□ -0.97
GPNMB-203ENST00000409458 PRO0461Q9UI25 63 aa9□□□□□ -0.97
GPNMB-203ENST00000409458 IGKV2-24A0A0C4DH68 120 aa9□□□□□ -0.97
GPNMB-203ENST00000409458 NKAPP1Q8N9T2 125 aa9□□□□□ -0.97
GPNMB-203ENST00000409458 IGLV5-37A0A075B6J1 123 aa8.99□□□□□ -0.97
GPNMB-203ENST00000409458 DNAH11Q96DT5 4516 aa8.99□□□□□ -0.97
GPNMB-203ENST00000409458 TRAV23DV6A0A075B6W5 121 aa8.98□□□□□ -0.97
GPNMB-203ENST00000409458 FUSP35637 526 aaKnown RBP eCLIP8.98□□□□□ -0.97
GPNMB-203ENST00000409458 FAM19A5Q7Z5A7 132 aaPredicted RBP8.98□□□□□ -0.97
GPNMB-203ENST00000409458 C7orf33Q8WU49 177 aa8.98□□□□□ -0.97
GPNMB-203ENST00000409458 CHTF8P0CG12 524 aa8.97□□□□□ -0.97
GPNMB-203ENST00000409458 TNP2Q05952 138 aa8.97□□□□□ -0.97
GPNMB-203ENST00000409458 C6orf99Q4VX62 202 aa8.97□□□□□ -0.97
GPNMB-203ENST00000409458 RTL8CO15255 209 aa8.97□□□□□ -0.97
GPNMB-203ENST00000409458 FAT2Q9NYQ8 4349 aa8.96□□□□□ -0.97
GPNMB-203ENST00000409458 A0A087WYN8 130 aa8.96□□□□□ -0.98
GPNMB-203ENST00000409458 C9JAW5 83 aa8.96□□□□□ -0.98
GPNMB-203ENST00000409458 F8W1H4 67 aa8.96□□□□□ -0.98
GPNMB-203ENST00000409458 H0YGX0 51 aa8.96□□□□□ -0.98
GPNMB-203ENST00000409458 SMCPP49901 116 aaPredicted RBP8.96□□□□□ -0.98
GPNMB-203ENST00000409458 SDIM1Q6ZPB5 146 aa8.96□□□□□ -0.98
GPNMB-203ENST00000409458 PKIGQ9Y2B9 76 aa8.95□□□□□ -0.98
GPNMB-203ENST00000409458 C22orf24Q9Y442 160 aa8.95□□□□□ -0.98
GPNMB-203ENST00000409458 DNAH5Q8TE73 4624 aa8.94□□□□□ -0.98
GPNMB-203ENST00000409458 A0A1W2PNN7 141 aa8.94□□□□□ -0.98
GPNMB-203ENST00000409458 ZNF73O43830 326 aaPredicted RBP8.94□□□□□ -0.98
GPNMB-203ENST00000409458 DIRC1Q969H9 104 aa8.94□□□□□ -0.98
GPNMB-203ENST00000409458 SLC25A20O43772 301 aa8.93□□□□□ -0.98
GPNMB-203ENST00000409458 TRACP01848 142 aa8.93□□□□□ -0.98
GPNMB-203ENST00000409458 MRPL55Q7Z7F7 128 aaKnown RBP8.93□□□□□ -0.98
GPNMB-203ENST00000409458 LINC00167Q96N53 147 aa8.93□□□□□ -0.98
GPNMB-203ENST00000409458 RPL37AP8A6NKH3 93 aa8.92□□□□□ -0.98
GPNMB-203ENST00000409458 PANO1I0J062 215 aa8.92□□□□□ -0.98
GPNMB-203ENST00000409458 LCE6AA0A183 80 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms