RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 FAM168BA1KXE4 195 aa8.98□□□□□ -0.97
CHRNA1-204ENST00000409323 TLX1NBP0CAT3 122 aa8.98□□□□□ -0.97
CHRNA1-204ENST00000409323 NPC2P61916 151 aa8.98□□□□□ -0.97
CHRNA1-204ENST00000409323 SFTA2Q6UW10 78 aa8.98□□□□□ -0.97
CHRNA1-204ENST00000409323 C9orf129Q5T035 196 aaKnown RBP8.97□□□□□ -0.97
CHRNA1-204ENST00000409323 MIR7-3HGQ8N6C7 128 aa8.97□□□□□ -0.97
CHRNA1-204ENST00000409323 HIST1H4GQ99525 98 aa8.97□□□□□ -0.97
CHRNA1-204ENST00000409323 FXYD2P54710 66 aa8.96□□□□□ -0.97
CHRNA1-204ENST00000409323 ADAMTSL4-AS1Q5T5F5 129 aa8.96□□□□□ -0.97
CHRNA1-204ENST00000409323 SPACA4Q8TDM5 124 aa8.96□□□□□ -0.97
CHRNA1-204ENST00000409323 SPANXDQ9BXN6 97 aa8.96□□□□□ -0.97
CHRNA1-204ENST00000409323 PPDPFQ9H3Y8 114 aa8.96□□□□□ -0.97
CHRNA1-204ENST00000409323 SPANXCQ9NY87 97 aa8.96□□□□□ -0.97
CHRNA1-204ENST00000409323 A0A1B0GWB2 263 aa8.95□□□□□ -0.98
CHRNA1-204ENST00000409323 TMEM238C9JI98 176 aa8.95□□□□□ -0.98
CHRNA1-204ENST00000409323 BATFQ16520 125 aa8.95□□□□□ -0.98
CHRNA1-204ENST00000409323 SND1-IT1Q9HBX3 110 aa8.95□□□□□ -0.98
CHRNA1-204ENST00000409323 A0A1W2PNN7 141 aa8.95□□□□□ -0.98
CHRNA1-204ENST00000409323 SRSF9Q13242 221 aaKnown RBP eCLIP8.95□□□□□ -0.98
CHRNA1-204ENST00000409323 Q6ZSA8 131 aa8.95□□□□□ -0.98
CHRNA1-204ENST00000409323 SCXQ7RTU7 201 aa8.95□□□□□ -0.98
CHRNA1-204ENST00000409323 SVIPQ8NHG7 77 aa8.95□□□□□ -0.98
CHRNA1-204ENST00000409323 DYNC1H1Q14204 4646 aaKnown RBP8.94□□□□□ -0.98
CHRNA1-204ENST00000409323 A0A087WYN8 130 aa8.94□□□□□ -0.98
CHRNA1-204ENST00000409323 A6NDN8 102 aa8.94□□□□□ -0.98
CHRNA1-204ENST00000409323 COX17Q14061 63 aa8.94□□□□□ -0.98
CHRNA1-204ENST00000409323 FAM19A5Q7Z5A7 132 aaPredicted RBP8.94□□□□□ -0.98
CHRNA1-204ENST00000409323 CIRBP-AS1Q8TBR5 109 aa8.94□□□□□ -0.98
CHRNA1-204ENST00000409323 LRP1BQ9NZR2 4599 aa8.93□□□□□ -0.98
CHRNA1-204ENST00000409323 EIF4EBP3O60516 100 aaPredicted RBP8.93□□□□□ -0.98
CHRNA1-204ENST00000409323 XGP55808 180 aa8.92□□□□□ -0.98
CHRNA1-204ENST00000409323 CIRBPQ14011 172 aaKnown RBP8.92□□□□□ -0.98
CHRNA1-204ENST00000409323 SERTAD4-AS1Q5TG53 156 aa8.92□□□□□ -0.98
CHRNA1-204ENST00000409323 KRTAP7-1Q8IUC3 87 aa8.92□□□□□ -0.98
CHRNA1-204ENST00000409323 Q8NDZ9 215 aa8.92□□□□□ -0.98
CHRNA1-204ENST00000409323 TAX1BP3O14907 124 aa8.91□□□□□ -0.98
CHRNA1-204ENST00000409323 IFITM1P13164 125 aa8.91□□□□□ -0.98
CHRNA1-204ENST00000409323 PKIGQ9Y2B9 76 aa8.91□□□□□ -0.98
CHRNA1-204ENST00000409323 SOSTDC1Q6X4U4 206 aa8.9□□□□□ -0.98
CHRNA1-204ENST00000409323 LINC00474Q9P2X8 69 aa8.9□□□□□ -0.98
CHRNA1-204ENST00000409323 TMEM238LA0A1B0GVL6 79 aa8.9□□□□□ -0.99
CHRNA1-204ENST00000409323 A6NJY4 79 aa8.9□□□□□ -0.99
CHRNA1-204ENST00000409323 MUSTN1Q8IVN3 82 aa8.9□□□□□ -0.99
CHRNA1-204ENST00000409323 SMR3BP02814 79 aaPredicted RBP8.89□□□□□ -0.99
CHRNA1-204ENST00000409323 PRR3P79522 188 aaKnown RBP8.89□□□□□ -0.99
CHRNA1-204ENST00000409323 RPL24P83731 157 aaKnown RBP8.88□□□□□ -0.99
CHRNA1-204ENST00000409323 PHF5AQ7RTV0 110 aaKnown RBP8.88□□□□□ -0.99
CHRNA1-204ENST00000409323 A0A1B0GV90 55 aa8.87□□□□□ -0.99
CHRNA1-204ENST00000409323 LOC107984156A0A0G2JMH3 177 aa8.86□□□□□ -0.99
CHRNA1-204ENST00000409323 GAGE10A6NGK3 116 aa8.86□□□□□ -0.99
CHRNA1-204ENST00000409323 NCR3O14931 201 aa8.86□□□□□ -0.99
CHRNA1-204ENST00000409323 CFC1BP0CG36 223 aa8.86□□□□□ -0.99
CHRNA1-204ENST00000409323 CFC1P0CG37 223 aa8.86□□□□□ -0.99
CHRNA1-204ENST00000409323 ARL17AQ8IVW1 177 aa8.86□□□□□ -0.99
CHRNA1-204ENST00000409323 LINC00308Q8TCZ7 52 aa8.86□□□□□ -0.99
CHRNA1-204ENST00000409323 COPS9Q8WXC6 57 aa8.86□□□□□ -0.99
CHRNA1-204ENST00000409323 PLAC8Q9NZF1 115 aa8.86□□□□□ -0.99
CHRNA1-204ENST00000409323 A4D1N5 150 aa8.86□□□□□ -0.99
CHRNA1-204ENST00000409323 C9orf118A6NHY6 69 aa8.86□□□□□ -0.99
CHRNA1-204ENST00000409323 M0QXV9 152 aa8.86□□□□□ -0.99
CHRNA1-204ENST00000409323 NHP2Q9NX24 153 aaKnown RBP8.86□□□□□ -0.99
CHRNA1-204ENST00000409323 A0A0B4J2C4 111 aa8.85□□□□□ -0.99
CHRNA1-204ENST00000409323 VPREB1P12018 145 aa8.85□□□□□ -0.99
CHRNA1-204ENST00000409323 C22orf24Q9Y442 160 aa8.85□□□□□ -0.99
CHRNA1-204ENST00000409323 DNAH8Q96JB1 4490 aa8.84□□□□□ -0.99
CHRNA1-204ENST00000409323 KRTAP11-1Q8IUC1 163 aa8.83□□□□□ -1
CHRNA1-204ENST00000409323 NKAPP1Q8N9T2 125 aa8.83□□□□□ -1
CHRNA1-204ENST00000409323 APOBP04114 4563 aaKnown RBP8.83□□□□□ -1
CHRNA1-204ENST00000409323 RPL37AP8A6NKH3 93 aa8.82□□□□□ -1
CHRNA1-204ENST00000409323 CDK2AP2O75956 126 aa8.82□□□□□ -1
CHRNA1-204ENST00000409323 KRTAP17-1Q9BYP8 105 aa8.82□□□□□ -1
CHRNA1-204ENST00000409323 K7ERJ3 54 aa8.82□□□□□ -1
CHRNA1-204ENST00000409323 MRPL55Q7Z7F7 128 aaKnown RBP8.81□□□□□ -1
CHRNA1-204ENST00000409323 C7orf33Q8WU49 177 aa8.81□□□□□ -1
CHRNA1-204ENST00000409323 PRO1854Q9UHT4 67 aa8.81□□□□□ -1
CHRNA1-204ENST00000409323 PLA2G2DQ9UNK4 145 aa8.81□□□□□ -1
CHRNA1-204ENST00000409323 IGKV2-28A0A075B6P5 120 aa8.8□□□□□ -1
CHRNA1-204ENST00000409323 IGKV2D-28P01615 120 aa8.8□□□□□ -1
CHRNA1-204ENST00000409323 UBE2BP63146 152 aa8.8□□□□□ -1
CHRNA1-204ENST00000409323 LINC00167Q96N53 147 aa8.8□□□□□ -1
CHRNA1-204ENST00000409323 KIAA1109Q2LD37 5005 aa8.79□□□□□ -1
CHRNA1-204ENST00000409323 EPM2AB3EWF7 344 aa8.79□□□□□ -1
CHRNA1-204ENST00000409323 LINC00528Q8N1L1 170 aa8.79□□□□□ -1
CHRNA1-204ENST00000409323 IGLV5-37A0A075B6J1 123 aa8.78□□□□□ -1
CHRNA1-204ENST00000409323 RAB37Q96AX2 223 aa8.78□□□□□ -1
CHRNA1-204ENST00000409323 H3BUT2 72 aa8.78□□□□□ -1
CHRNA1-204ENST00000409323 A0A1W2PPM0 123 aa8.77□□□□□ -1.01
CHRNA1-204ENST00000409323 M0R378 163 aa8.76□□□□□ -1.01
CHRNA1-204ENST00000409323 TSPAN13O95857 204 aa8.76□□□□□ -1.01
CHRNA1-204ENST00000409323 BIRC6Q9NR09 4857 aa8.76□□□□□ -1.01
CHRNA1-204ENST00000409323 TRBV10-3A0A0K0K1G6 114 aa8.75□□□□□ -1.01
CHRNA1-204ENST00000409323 NDUFC2O95298 119 aa8.75□□□□□ -1.01
CHRNA1-204ENST00000409323 LINC00337Q8N6G1 96 aa8.75□□□□□ -1.01
CHRNA1-204ENST00000409323 OR13C6PQ8NH95 151 aa8.75□□□□□ -1.01
CHRNA1-204ENST00000409323 HSPG2P98160 4391 aa8.75□□□□□ -1.01
CHRNA1-204ENST00000409323 PSORS1C2Q9UIG4 136 aa8.74□□□□□ -1.01
CHRNA1-204ENST00000409323 FABP2P12104 132 aa8.73□□□□□ -1.01
CHRNA1-204ENST00000409323 UBE2V1Q13404 147 aa8.73□□□□□ -1.01
CHRNA1-204ENST00000409323 S100A7L2Q5SY68 101 aa8.73□□□□□ -1.01
CHRNA1-204ENST00000409323 IGLV1-50A0A075B6I6 118 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 131.4 ms