RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 H3BPC8 53 aa12.2□□□□□ -0.46
SMPD4-202ENST00000409031 DEFB116Q30KQ4 102 aa12.2□□□□□ -0.46
SMPD4-202ENST00000409031 CHD8Q9HCK8 2581 aa12.19□□□□□ -0.46
SMPD4-202ENST00000409031 Q9BRP9 147 aa12.18□□□□□ -0.46
SMPD4-202ENST00000409031 PLA2G2AP14555 144 aa12.17□□□□□ -0.46
SMPD4-202ENST00000409031 IGHV4-30-4P0DP06 118 aa12.17□□□□□ -0.46
SMPD4-202ENST00000409031 Q8NBF4 154 aa12.16□□□□□ -0.46
SMPD4-202ENST00000409031 IGLV9-49A0A0B4J1Y8 123 aa12.15□□□□□ -0.46
SMPD4-202ENST00000409031 C6orf48Q9UBA6 75 aa12.14□□□□□ -0.47
SMPD4-202ENST00000409031 LYPD5Q6UWN5 251 aa12.14□□□□□ -0.47
SMPD4-202ENST00000409031 C7orf33Q8WU49 177 aa12.11□□□□□ -0.47
SMPD4-202ENST00000409031 DNAH12Q6ZR08 3092 aa12.1□□□□□ -0.47
SMPD4-202ENST00000409031 IGHV6-1A0A0B4J1U7 121 aa12.1□□□□□ -0.47
SMPD4-202ENST00000409031 CEP350Q5VT06 3117 aa12.1□□□□□ -0.47
SMPD4-202ENST00000409031 IGLV6-57P01721 117 aa12.1□□□□□ -0.47
SMPD4-202ENST00000409031 PRRC2CQ9Y520 2896 aaKnown RBP12.09□□□□□ -0.47
SMPD4-202ENST00000409031 A8MUN3 132 aa12.08□□□□□ -0.48
SMPD4-202ENST00000409031 CYP4F30PQ9H0H9 118 aa12.08□□□□□ -0.48
SMPD4-202ENST00000409031 TP53AIP1Q9HCN2 124 aa12.08□□□□□ -0.48
SMPD4-202ENST00000409031 CD164Q04900 197 aa12.08□□□□□ -0.48
SMPD4-202ENST00000409031 COL27A1Q8IZC6 1860 aaPredicted RBP12.06□□□□□ -0.48
SMPD4-202ENST00000409031 ZNF575Q86XF7 245 aa12.06□□□□□ -0.48
SMPD4-202ENST00000409031 C22orf24Q9Y442 160 aa12.05□□□□□ -0.48
SMPD4-202ENST00000409031 C9orf129Q5T035 196 aaKnown RBP12.05□□□□□ -0.48
SMPD4-202ENST00000409031 GVQW2A0A096LPI5 108 aaPredicted RBP12.04□□□□□ -0.48
SMPD4-202ENST00000409031 JMJD1CQ15652 2540 aa12.04□□□□□ -0.48
SMPD4-202ENST00000409031 C16orf95Q9H693 158 aa12.04□□□□□ -0.48
SMPD4-202ENST00000409031 SPAG11AQ6PDA7 123 aa12.03□□□□□ -0.48
SMPD4-202ENST00000409031 OBSCN-AS1Q96MR7 158 aa12.03□□□□□ -0.48
SMPD4-202ENST00000409031 Q6ZTC4 211 aa12.02□□□□□ -0.49
SMPD4-202ENST00000409031 TRAV22A0A0B4J277 110 aa12.01□□□□□ -0.49
SMPD4-202ENST00000409031 Q6ZRX8 168 aa12.01□□□□□ -0.49
SMPD4-202ENST00000409031 TRBV7-4A0A0J9YYF1 115 aa12□□□□□ -0.49
SMPD4-202ENST00000409031 PRLHP81277 87 aa12□□□□□ -0.49
SMPD4-202ENST00000409031 LINC00167Q96N53 147 aa12□□□□□ -0.49
SMPD4-202ENST00000409031 PCSK5Q92824 1860 aa12□□□□□ -0.49
SMPD4-202ENST00000409031 ZFYVE26Q68DK2 2539 aa12□□□□□ -0.49
SMPD4-202ENST00000409031 BPTFQ12830 3046 aa11.99□□□□□ -0.49
SMPD4-202ENST00000409031 LINC00476Q8WZB0 136 aa11.98□□□□□ -0.49
SMPD4-202ENST00000409031 VPREB1P12018 145 aa11.97□□□□□ -0.49
SMPD4-202ENST00000409031 FASNP49327 2511 aaKnown RBP11.97□□□□□ -0.49
SMPD4-202ENST00000409031 MTORP42345 2549 aa11.96□□□□□ -0.49
SMPD4-202ENST00000409031 A0A1B0GU69 56 aa11.96□□□□□ -0.5
SMPD4-202ENST00000409031 INAFM1C9JVW0 142 aa11.96□□□□□ -0.5
SMPD4-202ENST00000409031 SERTAD4-AS1Q5TG53 156 aa11.95□□□□□ -0.5
SMPD4-202ENST00000409031 FSHBP01225 129 aa11.94□□□□□ -0.5
SMPD4-202ENST00000409031 ACYP2P14621 99 aa11.94□□□□□ -0.5
SMPD4-202ENST00000409031 ATP11AUNQ6ZP68 121 aa11.94□□□□□ -0.5
SMPD4-202ENST00000409031 LINC00528Q8N1L1 170 aa11.94□□□□□ -0.5
SMPD4-202ENST00000409031 IL17DQ8TAD2 202 aa11.93□□□□□ -0.5
SMPD4-202ENST00000409031 K7EQZ3 153 aa11.93□□□□□ -0.5
SMPD4-202ENST00000409031 LINC01556Q5JQF7 62 aa11.93□□□□□ -0.5
SMPD4-202ENST00000409031 C8orf87E5RJ46 101 aa11.91□□□□□ -0.5
SMPD4-202ENST00000409031 X6R8D5 127 aa11.91□□□□□ -0.5
SMPD4-202ENST00000409031 EPG5Q9HCE0 2579 aa11.91□□□□□ -0.5
SMPD4-202ENST00000409031 Q5XG85 94 aa11.9□□□□□ -0.5
SMPD4-202ENST00000409031 LRRK2Q5S007 2527 aa11.9□□□□□ -0.51
SMPD4-202ENST00000409031 KTN1-AS1Q86SY8 53 aa11.89□□□□□ -0.51
SMPD4-202ENST00000409031 LOC101927531A0A1B0GV80 90 aa11.89□□□□□ -0.51
SMPD4-202ENST00000409031 PRR15Q8IV56 129 aa11.89□□□□□ -0.51
SMPD4-202ENST00000409031 KRTAP10-9P60411 292 aa11.88□□□□□ -0.51
SMPD4-202ENST00000409031 COA5Q86WW8 74 aa11.88□□□□□ -0.51
SMPD4-202ENST00000409031 ST20-AS1Q8NBB2 130 aa11.88□□□□□ -0.51
SMPD4-202ENST00000409031 A0A0C4DFX4 3053 aa11.88□□□□□ -0.51
SMPD4-202ENST00000409031 OXLD1Q5BKU9 147 aa11.88□□□□□ -0.51
SMPD4-202ENST00000409031 H3BNG1 76 aa11.86□□□□□ -0.51
SMPD4-202ENST00000409031 CIRBP-AS1Q8TBR5 109 aa11.85□□□□□ -0.51
SMPD4-202ENST00000409031 KCNQ1DNQ9H478 68 aa11.85□□□□□ -0.51
SMPD4-202ENST00000409031 PCNTO95613 3336 aa11.83□□□□□ -0.51
SMPD4-202ENST00000409031 RPL37AP61513 92 aaKnown RBP11.83□□□□□ -0.52
SMPD4-202ENST00000409031 A8MWP4 228 aa11.82□□□□□ -0.52
SMPD4-202ENST00000409031 Q6ZRP5 223 aa11.82□□□□□ -0.52
SMPD4-202ENST00000409031 C7orf65Q6ZTY9 151 aa11.81□□□□□ -0.52
SMPD4-202ENST00000409031 SPINK1P00995 79 aa11.8□□□□□ -0.52
SMPD4-202ENST00000409031 POLQO75417 2590 aa11.8□□□□□ -0.52
SMPD4-202ENST00000409031 CYSTM1Q9H1C7 97 aa11.8□□□□□ -0.52
SMPD4-202ENST00000409031 M0R2N4 97 aa11.8□□□□□ -0.52
SMPD4-202ENST00000409031 MOBPQ13875 183 aa11.79□□□□□ -0.52
SMPD4-202ENST00000409031 Q1T7F1 81 aa11.79□□□□□ -0.52
SMPD4-202ENST00000409031 Q8N377 158 aa11.78□□□□□ -0.52
SMPD4-202ENST00000409031 OCR1Q9BZK8 76 aa11.78□□□□□ -0.52
SMPD4-202ENST00000409031 F8P00451 2351 aa11.78□□□□□ -0.52
SMPD4-202ENST00000409031 RETNLBQ9BQ08 111 aa11.77□□□□□ -0.52
SMPD4-202ENST00000409031 FAM104AQ969W3 186 aa11.77□□□□□ -0.53
SMPD4-202ENST00000409031 LCA10Q71F78 164 aa11.76□□□□□ -0.53
SMPD4-202ENST00000409031 CSNK1G2-AS1Q8NCQ2 148 aa11.76□□□□□ -0.53
SMPD4-202ENST00000409031 SPANXA2-OT1Q8N9U9 137 aa11.75□□□□□ -0.53
SMPD4-202ENST00000409031 PRR34Q9NV39 138 aa11.75□□□□□ -0.53
SMPD4-202ENST00000409031 FP248Q71RG6 208 aaPredicted RBP11.73□□□□□ -0.53
SMPD4-202ENST00000409031 HTTP42858 3142 aa11.72□□□□□ -0.53
SMPD4-202ENST00000409031 IGLV1-50A0A075B6I6 118 aa11.72□□□□□ -0.53
SMPD4-202ENST00000409031 CHD7Q9P2D1 2997 aa11.71□□□□□ -0.53
SMPD4-202ENST00000409031 RANBP2P49792 3224 aaKnown RBP11.71□□□□□ -0.53
SMPD4-202ENST00000409031 ANKRD17O75179 2603 aaKnown RBP11.71□□□□□ -0.53
SMPD4-202ENST00000409031 Q8NAQ8 132 aa11.71□□□□□ -0.54
SMPD4-202ENST00000409031 IGKV2D-30A0A075B6S6 120 aa11.69□□□□□ -0.54
SMPD4-202ENST00000409031 IGKV2-30P06310 120 aa11.69□□□□□ -0.54
SMPD4-202ENST00000409031 IGFL1Q6UW32 110 aa11.69□□□□□ -0.54
SMPD4-202ENST00000409031 EPM2AB3EWF7 344 aa11.69□□□□□ -0.54
SMPD4-202ENST00000409031 UQCR11O14957 56 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms