RNA–Protein interactions for RNA: ENST00000406938.2

CHKB-201, Transcript of choline kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHKB, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-201ENST00000406938 MUSTN1Q8IVN3 82 aa13.14□□□□□ -0.31
CHKB-201ENST00000406938 A0A096LNI7 61 aa13.13□□□□□ -0.31
CHKB-201ENST00000406938 PTTG1IPP53801 180 aa13.13□□□□□ -0.31
CHKB-201ENST00000406938 SDIM1Q6ZPB5 146 aa13.13□□□□□ -0.31
CHKB-201ENST00000406938 CEND1Q8N111 149 aa13.13□□□□□ -0.31
CHKB-201ENST00000406938 PGPEP1Q9NXJ5 209 aa13.13□□□□□ -0.31
CHKB-201ENST00000406938 PKIGQ9Y2B9 76 aa13.13□□□□□ -0.31
CHKB-201ENST00000406938 C9orf129Q5T035 196 aaKnown RBP13.12□□□□□ -0.31
CHKB-201ENST00000406938 PKD1P98161 4303 aa13.11□□□□□ -0.31
CHKB-201ENST00000406938 C16orf90A8MZG2 172 aa13.11□□□□□ -0.31
CHKB-201ENST00000406938 COPS9Q8WXC6 57 aa13.11□□□□□ -0.31
CHKB-201ENST00000406938 IGKV2-24A0A0C4DH68 120 aa13.1□□□□□ -0.31
CHKB-201ENST00000406938 LOC107984156A0A0G2JMH3 177 aa13.1□□□□□ -0.31
CHKB-201ENST00000406938 A0A1B0GVY2 172 aa13.1□□□□□ -0.31
CHKB-201ENST00000406938 A6NDN8 102 aa13.1□□□□□ -0.31
CHKB-201ENST00000406938 ARL17AQ8IVW1 177 aa13.1□□□□□ -0.31
CHKB-201ENST00000406938 PPDPFQ9H3Y8 114 aa13.1□□□□□ -0.31
CHKB-201ENST00000406938 CHTF8P0CG12 524 aa13.09□□□□□ -0.31
CHKB-201ENST00000406938 FXYD2P54710 66 aa13.09□□□□□ -0.31
CHKB-201ENST00000406938 RPL24P83731 157 aaKnown RBP13.08□□□□□ -0.32
CHKB-201ENST00000406938 Q8NDZ9 215 aa13.07□□□□□ -0.32
CHKB-201ENST00000406938 DNAH5Q8TE73 4624 aa13.07□□□□□ -0.32
CHKB-201ENST00000406938 A4D1N5 150 aa13.06□□□□□ -0.32
CHKB-201ENST00000406938 PANO1I0J062 215 aa13.05□□□□□ -0.32
CHKB-201ENST00000406938 LINC00474Q9P2X8 69 aa13.04□□□□□ -0.32
CHKB-201ENST00000406938 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.04□□□□□ -0.32
CHKB-201ENST00000406938 FAM168BA1KXE4 195 aa13.03□□□□□ -0.32
CHKB-201ENST00000406938 TMEM238LA0A1B0GVL6 79 aa13.02□□□□□ -0.32
CHKB-201ENST00000406938 A6NJY4 79 aa13.02□□□□□ -0.32
CHKB-201ENST00000406938 SERTAD4-AS1Q5TG53 156 aa13.02□□□□□ -0.32
CHKB-201ENST00000406938 SPACA4Q8TDM5 124 aa13.02□□□□□ -0.32
CHKB-201ENST00000406938 NDUFC2O95298 119 aa13.02□□□□□ -0.33
CHKB-201ENST00000406938 VPREB1P12018 145 aa13.02□□□□□ -0.33
CHKB-201ENST00000406938 PRR3P79522 188 aaKnown RBP13.01□□□□□ -0.33
CHKB-201ENST00000406938 KRTAP10-1P60331 282 aa13□□□□□ -0.33
CHKB-201ENST00000406938 FAM19A5Q7Z5A7 132 aaPredicted RBP13□□□□□ -0.33
CHKB-201ENST00000406938 PLA2G2DQ9UNK4 145 aa13□□□□□ -0.33
CHKB-201ENST00000406938 PKHD1P08F94 4074 aa12.99□□□□□ -0.33
CHKB-201ENST00000406938 IGKV2-28A0A075B6P5 120 aa12.99□□□□□ -0.33
CHKB-201ENST00000406938 NCR3O14931 201 aa12.99□□□□□ -0.33
CHKB-201ENST00000406938 IGKV2D-28P01615 120 aa12.99□□□□□ -0.33
CHKB-201ENST00000406938 KRTAP7-1Q8IUC3 87 aa12.99□□□□□ -0.33
CHKB-201ENST00000406938 NHP2Q9NX24 153 aaKnown RBP12.99□□□□□ -0.33
CHKB-201ENST00000406938 TAX1BP3O14907 124 aa12.99□□□□□ -0.33
CHKB-201ENST00000406938 A0A1W2PNN7 141 aa12.98□□□□□ -0.33
CHKB-201ENST00000406938 CFC1BP0CG36 223 aa12.98□□□□□ -0.33
CHKB-201ENST00000406938 CFC1P0CG37 223 aa12.98□□□□□ -0.33
CHKB-201ENST00000406938 UBE2V1Q13404 147 aa12.97□□□□□ -0.33
CHKB-201ENST00000406938 K7ERJ3 54 aa12.96□□□□□ -0.33
CHKB-201ENST00000406938 NKAPP1Q8N9T2 125 aa12.96□□□□□ -0.33
CHKB-201ENST00000406938 DPH3Q96FX2 82 aa12.96□□□□□ -0.33
CHKB-201ENST00000406938 IGLV5-37A0A075B6J1 123 aa12.95□□□□□ -0.34
CHKB-201ENST00000406938 LINC00337Q8N6G1 96 aa12.95□□□□□ -0.34
CHKB-201ENST00000406938 A0A0B4J2C4 111 aa12.95□□□□□ -0.34
CHKB-201ENST00000406938 FAM30AQ9NZY2 134 aa12.95□□□□□ -0.34
CHKB-201ENST00000406938 A0A087WYN8 130 aa12.94□□□□□ -0.34
CHKB-201ENST00000406938 TRBV10-2A0A0K0K1G8 114 aa12.94□□□□□ -0.34
CHKB-201ENST00000406938 A0A1B0GWB2 263 aa12.94□□□□□ -0.34
CHKB-201ENST00000406938 Q6ZSA8 131 aa12.94□□□□□ -0.34
CHKB-201ENST00000406938 RAB37Q96AX2 223 aa12.94□□□□□ -0.34
CHKB-201ENST00000406938 M0QXV9 152 aa12.93□□□□□ -0.34
CHKB-201ENST00000406938 C22orf24Q9Y442 160 aa12.93□□□□□ -0.34
CHKB-201ENST00000406938 VAMP3Q15836 100 aa12.92□□□□□ -0.34
CHKB-201ENST00000406938 C9orf118A6NHY6 69 aa12.91□□□□□ -0.34
CHKB-201ENST00000406938 M0R378 163 aa12.91□□□□□ -0.34
CHKB-201ENST00000406938 TRAV13-2A0A0B4J235 113 aa12.91□□□□□ -0.34
CHKB-201ENST00000406938 C7orf33Q8WU49 177 aa12.91□□□□□ -0.34
CHKB-201ENST00000406938 GAGE10A6NGK3 116 aa12.9□□□□□ -0.34
CHKB-201ENST00000406938 GTF2H5Q6ZYL4 71 aa12.9□□□□□ -0.34
CHKB-201ENST00000406938 MRPL55Q7Z7F7 128 aaKnown RBP12.9□□□□□ -0.34
CHKB-201ENST00000406938 OR13C6PQ8NH95 151 aa12.9□□□□□ -0.34
CHKB-201ENST00000406938 PLAC8Q9NZF1 115 aa12.9□□□□□ -0.34
CHKB-201ENST00000406938 RPL13AP40429 203 aaKnown RBP12.89□□□□□ -0.35
CHKB-201ENST00000406938 S100A7L2Q5SY68 101 aa12.89□□□□□ -0.35
CHKB-201ENST00000406938 PRO1854Q9UHT4 67 aa12.89□□□□□ -0.35
CHKB-201ENST00000406938 EPM2AB3EWF7 344 aa12.88□□□□□ -0.35
CHKB-201ENST00000406938 TRBV10-3A0A0K0K1G6 114 aa12.88□□□□□ -0.35
CHKB-201ENST00000406938 DYNC1H1Q14204 4646 aaKnown RBP12.87□□□□□ -0.35
CHKB-201ENST00000406938 LRP1BQ9NZR2 4599 aa12.87□□□□□ -0.35
CHKB-201ENST00000406938 IGLV6-57P01721 117 aa12.87□□□□□ -0.35
CHKB-201ENST00000406938 PHF5AQ7RTV0 110 aaKnown RBP12.87□□□□□ -0.35
CHKB-201ENST00000406938 LINC00167Q96N53 147 aa12.87□□□□□ -0.35
CHKB-201ENST00000406938 DNAH8Q96JB1 4490 aa12.87□□□□□ -0.35
CHKB-201ENST00000406938 H3BUT2 72 aa12.86□□□□□ -0.35
CHKB-201ENST00000406938 SCXQ7RTU7 201 aa12.86□□□□□ -0.35
CHKB-201ENST00000406938 CIRBP-AS1Q8TBR5 109 aa12.86□□□□□ -0.35
CHKB-201ENST00000406938 TMEM126AQ9H061 195 aa12.86□□□□□ -0.35
CHKB-201ENST00000406938 H7C2G1 150 aa12.85□□□□□ -0.35
CHKB-201ENST00000406938 HAMPP81172 84 aa12.85□□□□□ -0.35
CHKB-201ENST00000406938 RPL37AP8A6NKH3 93 aa12.84□□□□□ -0.35
CHKB-201ENST00000406938 IGLV1-50A0A075B6I6 118 aa12.82□□□□□ -0.36
CHKB-201ENST00000406938 Q1RN00 199 aa12.82□□□□□ -0.36
CHKB-201ENST00000406938 TSPAN13O95857 204 aa12.81□□□□□ -0.36
CHKB-201ENST00000406938 FABP2P12104 132 aa12.81□□□□□ -0.36
CHKB-201ENST00000406938 UBE2BP63146 152 aa12.8□□□□□ -0.36
CHKB-201ENST00000406938 TRAV23DV6A0A075B6W5 121 aa12.8□□□□□ -0.36
CHKB-201ENST00000406938 A0A1W2PPM0 123 aa12.8□□□□□ -0.36
CHKB-201ENST00000406938 SMIM11BQ8TCY0 68 aa12.8□□□□□ -0.36
CHKB-201ENST00000406938 K7EP34 96 aa12.78□□□□□ -0.36
CHKB-201ENST00000406938 KRTAP11-1Q8IUC1 163 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 169.3 ms