RNA–Protein interactions for RNA: ENST00000405493.6

RAPGEF3-204, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS P3 TSL 5 BASIC

Gene RAPGEF3, Length 5,751 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-204ENST00000405493 FAM19A4Q96LR4 140 aa8.16□□□□□ -1.1
RAPGEF3-204ENST00000405493 C19orf73Q9NVV2 129 aa8.16□□□□□ -1.1
RAPGEF3-204ENST00000405493 PLA2G1BP04054 148 aaKnown RBP8.15□□□□□ -1.11
RAPGEF3-204ENST00000405493 CRYGAP11844 174 aa8.14□□□□□ -1.11
RAPGEF3-204ENST00000405493 LINC00337Q8N6G1 96 aa8.14□□□□□ -1.11
RAPGEF3-204ENST00000405493 CIRBP-AS1Q8TBR5 109 aa8.14□□□□□ -1.11
RAPGEF3-204ENST00000405493 IGLV5-39A0A0G2JS06 123 aa8.13□□□□□ -1.11
RAPGEF3-204ENST00000405493 KRTAP1-1Q07627 177 aa8.13□□□□□ -1.11
RAPGEF3-204ENST00000405493 Q8N3U1 123 aa8.13□□□□□ -1.11
RAPGEF3-204ENST00000405493 LIMD2Q9BT23 127 aa8.13□□□□□ -1.11
RAPGEF3-204ENST00000405493 Q6ZRU5 148 aa8.13□□□□□ -1.11
RAPGEF3-204ENST00000405493 A8MTW9 85 aa8.12□□□□□ -1.11
RAPGEF3-204ENST00000405493 COL27A1Q8IZC6 1860 aaPredicted RBP8.12□□□□□ -1.11
RAPGEF3-204ENST00000405493 LAMA3Q16787 3333 aa8.12□□□□□ -1.11
RAPGEF3-204ENST00000405493 LINC00336Q6ZUF6 198 aa8.11□□□□□ -1.11
RAPGEF3-204ENST00000405493 KRTAP10-11P60412 298 aa8.11□□□□□ -1.11
RAPGEF3-204ENST00000405493 Q9BRP9 147 aa8.11□□□□□ -1.11
RAPGEF3-204ENST00000405493 LINC00588Q9Y4M8 146 aa8.11□□□□□ -1.11
RAPGEF3-204ENST00000405493 RTL8CO15255 209 aa8.1□□□□□ -1.11
RAPGEF3-204ENST00000405493 SOSTDC1Q6X4U4 206 aa8.1□□□□□ -1.11
RAPGEF3-204ENST00000405493 RPS28P62857 69 aaKnown RBP8.09□□□□□ -1.11
RAPGEF3-204ENST00000405493 PRR15LQ9BU68 103 aa8.09□□□□□ -1.11
RAPGEF3-204ENST00000405493 Q8N9L7 120 aa8.09□□□□□ -1.11
RAPGEF3-204ENST00000405493 IGHV6-1A0A0B4J1U7 121 aa8.08□□□□□ -1.12
RAPGEF3-204ENST00000405493 LINC00575Q6W349 94 aa8.08□□□□□ -1.12
RAPGEF3-204ENST00000405493 TM2D3Q9BRN9 247 aa8.08□□□□□ -1.12
RAPGEF3-204ENST00000405493 C5orf42Q9H799 3197 aa8.08□□□□□ -1.12
RAPGEF3-204ENST00000405493 Q6ZVQ6 151 aa8.08□□□□□ -1.12
RAPGEF3-204ENST00000405493 HELZ2Q9BYK8 2649 aaKnown RBP8.08□□□□□ -1.12
RAPGEF3-204ENST00000405493 DNAH10OSP0CZ25 163 aa8.07□□□□□ -1.12
RAPGEF3-204ENST00000405493 BRCA2P51587 3418 aa8.07□□□□□ -1.12
RAPGEF3-204ENST00000405493 IGLV5-45A0A087WSX0 123 aa8.07□□□□□ -1.12
RAPGEF3-204ENST00000405493 TRANK1O15050 2925 aa8.06□□□□□ -1.12
RAPGEF3-204ENST00000405493 LINC01547P58512 204 aaPredicted RBP8.06□□□□□ -1.12
RAPGEF3-204ENST00000405493 J3QL48 77 aa8.06□□□□□ -1.12
RAPGEF3-204ENST00000405493 DEFB116Q30KQ4 102 aa8.06□□□□□ -1.12
RAPGEF3-204ENST00000405493 Q6ZRP5 223 aa8.06□□□□□ -1.12
RAPGEF3-204ENST00000405493 MUC4Q99102 2169 aa8.06□□□□□ -1.12
RAPGEF3-204ENST00000405493 PRLHP81277 87 aa8.06□□□□□ -1.12
RAPGEF3-204ENST00000405493 TMEM254Q8TBM7 123 aa8.06□□□□□ -1.12
RAPGEF3-204ENST00000405493 RETNLBQ9BQ08 111 aa8.06□□□□□ -1.12
RAPGEF3-204ENST00000405493 KRTAP10-3P60369 221 aa8.05□□□□□ -1.12
RAPGEF3-204ENST00000405493 A6NED7 52 aa8.05□□□□□ -1.12
RAPGEF3-204ENST00000405493 FAM218AQ96MZ4 157 aa8.05□□□□□ -1.12
RAPGEF3-204ENST00000405493 C22orf24Q9Y442 160 aa8.05□□□□□ -1.12
RAPGEF3-204ENST00000405493 A0A087WSZ3 146 aa8.04□□□□□ -1.12
RAPGEF3-204ENST00000405493 LINC00208Q96KT6 92 aa8.04□□□□□ -1.12
RAPGEF3-204ENST00000405493 TRBV7-6A0A0J9YX20 115 aa8.03□□□□□ -1.12
RAPGEF3-204ENST00000405493 PRO0628Q9UI54 55 aa8.03□□□□□ -1.12
RAPGEF3-204ENST00000405493 CXCL6P80162 114 aa8.03□□□□□ -1.12
RAPGEF3-204ENST00000405493 K7ERS5 55 aa8.02□□□□□ -1.13
RAPGEF3-204ENST00000405493 Q9UF83 564 aa8.02□□□□□ -1.13
RAPGEF3-204ENST00000405493 IGHV3OR16-9A0A0B4J2B5 98 aa8.02□□□□□ -1.13
RAPGEF3-204ENST00000405493 BCE1O60756 84 aa8.01□□□□□ -1.13
RAPGEF3-204ENST00000405493 LITAFQ99732 161 aa8.01□□□□□ -1.13
RAPGEF3-204ENST00000405493 CSNK1G2-AS1Q8NCQ2 148 aa8□□□□□ -1.13
RAPGEF3-204ENST00000405493 SMCR5Q8TEV8 140 aa8□□□□□ -1.13
RAPGEF3-204ENST00000405493 C6orf48Q9UBA6 75 aa8□□□□□ -1.13
RAPGEF3-204ENST00000405493 C4orf26Q17RF5 130 aa7.99□□□□□ -1.13
RAPGEF3-204ENST00000405493 GVQW2A0A096LPI5 108 aaPredicted RBP7.98□□□□□ -1.13
RAPGEF3-204ENST00000405493 PMAIP1Q13794 54 aa7.98□□□□□ -1.13
RAPGEF3-204ENST00000405493 KIAA0087Q14695 138 aa7.98□□□□□ -1.13
RAPGEF3-204ENST00000405493 PCOTHQ58A44 107 aa7.98□□□□□ -1.13
RAPGEF3-204ENST00000405493 RPL37AP61513 92 aaKnown RBP7.97□□□□□ -1.13
RAPGEF3-204ENST00000405493 PRRC2CQ9Y520 2896 aaKnown RBP7.97□□□□□ -1.13
RAPGEF3-204ENST00000405493 H0Y9P7 68 aa7.96□□□□□ -1.14
RAPGEF3-204ENST00000405493 HCG22E2RYF7 251 aa7.96□□□□□ -1.14
RAPGEF3-204ENST00000405493 LINC00167Q96N53 147 aa7.95□□□□□ -1.14
RAPGEF3-204ENST00000405493 PSPHP1O15172 72 aa7.95□□□□□ -1.14
RAPGEF3-204ENST00000405493 LAMA2P24043 3122 aaKnown RBP7.95□□□□□ -1.14
RAPGEF3-204ENST00000405493 PRUNE2Q8WUY3 3088 aa7.92□□□□□ -1.14
RAPGEF3-204ENST00000405493 A0A0C4DFX4 3053 aa7.92□□□□□ -1.14
RAPGEF3-204ENST00000405493 TYMSOSQ8TAI1 123 aa7.91□□□□□ -1.14
RAPGEF3-204ENST00000405493 Q6ZQT0 140 aa7.91□□□□□ -1.14
RAPGEF3-204ENST00000405493 APLNQ9ULZ1 77 aa7.91□□□□□ -1.14
RAPGEF3-204ENST00000405493 LINC00612Q8N6U2 182 aa7.91□□□□□ -1.14
RAPGEF3-204ENST00000405493 WIPF1O43516 503 aa7.9□□□□□ -1.14
RAPGEF3-204ENST00000405493 LOC110117498A0A087WWA1 95 aa7.9□□□□□ -1.14
RAPGEF3-204ENST00000405493 ELOF1P60002 83 aaKnown RBP7.9□□□□□ -1.14
RAPGEF3-204ENST00000405493 PHF5AQ7RTV0 110 aaKnown RBP7.9□□□□□ -1.15
RAPGEF3-204ENST00000405493 SMIM29Q86T20 159 aa7.9□□□□□ -1.15
RAPGEF3-204ENST00000405493 MGAM2Q2M2H8 2515 aa7.89□□□□□ -1.15
RAPGEF3-204ENST00000405493 A0A087WTM6 91 aa7.89□□□□□ -1.15
RAPGEF3-204ENST00000405493 SPINK1P00995 79 aa7.89□□□□□ -1.15
RAPGEF3-204ENST00000405493 MOBPQ13875 183 aa7.88□□□□□ -1.15
RAPGEF3-204ENST00000405493 ATRQ13535 2644 aa7.88□□□□□ -1.15
RAPGEF3-204ENST00000405493 MAST4O15021 2626 aa7.88□□□□□ -1.15
RAPGEF3-204ENST00000405493 USP24Q9UPU5 2620 aa7.88□□□□□ -1.15
RAPGEF3-204ENST00000405493 EIF4EBP3O60516 100 aaPredicted RBP7.88□□□□□ -1.15
RAPGEF3-204ENST00000405493 Q8NBF4 154 aa7.87□□□□□ -1.15
RAPGEF3-204ENST00000405493 hDV103S1A0JD37 113 aa7.87□□□□□ -1.15
RAPGEF3-204ENST00000405493 LINC00476Q8WZB0 136 aa7.86□□□□□ -1.15
RAPGEF3-204ENST00000405493 GIG44P09565 113 aaPredicted RBP7.85□□□□□ -1.15
RAPGEF3-204ENST00000405493 CHTF8P0CG12 524 aa7.85□□□□□ -1.15
RAPGEF3-204ENST00000405493 C1orf64Q8NEQ6 169 aa7.85□□□□□ -1.15
RAPGEF3-204ENST00000405493 SPACA4Q8TDM5 124 aa7.85□□□□□ -1.15
RAPGEF3-204ENST00000405493 Q6ZRX8 168 aa7.84□□□□□ -1.15
RAPGEF3-204ENST00000405493 ST20-AS1Q8NBB2 130 aa7.84□□□□□ -1.15
RAPGEF3-204ENST00000405493 FLNAP21333 2647 aaKnown RBP7.83□□□□□ -1.16
RAPGEF3-204ENST00000405493 PRR34Q9NV39 138 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms