RNA–Protein interactions for RNA: ENST00000400060.8

PTPRM-203, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5 BASIC

Gene PTPRM, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-203ENST00000400060 C16orf95Q9H693 158 aa6.86□□□□□ -1.31
PTPRM-203ENST00000400060 MYO9AB2RTY4 2548 aa6.86□□□□□ -1.31
PTPRM-203ENST00000400060 SORL1Q92673 2214 aa6.86□□□□□ -1.31
PTPRM-203ENST00000400060 A0A0J9YWU9 116 aa6.85□□□□□ -1.31
PTPRM-203ENST00000400060 A8MTW9 85 aa6.85□□□□□ -1.31
PTPRM-203ENST00000400060 IGHV4-30-4P0DP06 118 aa6.85□□□□□ -1.31
PTPRM-203ENST00000400060 COA5Q86WW8 74 aa6.85□□□□□ -1.31
PTPRM-203ENST00000400060 Q6ZTC4 211 aa6.85□□□□□ -1.31
PTPRM-203ENST00000400060 CCDC168Q8NDH2 2452 aa6.84□□□□□ -1.31
PTPRM-203ENST00000400060 KIAA0087Q14695 138 aa6.83□□□□□ -1.32
PTPRM-203ENST00000400060 DEFB135Q30KP9 77 aa6.83□□□□□ -1.32
PTPRM-203ENST00000400060 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.83□□□□□ -1.32
PTPRM-203ENST00000400060 ODF3L2Q3SX64 289 aa6.82□□□□□ -1.32
PTPRM-203ENST00000400060 A0A1W2PPR1 153 aa6.82□□□□□ -1.32
PTPRM-203ENST00000400060 SONP18583 2426 aaKnown RBP6.82□□□□□ -1.32
PTPRM-203ENST00000400060 LINC00588Q9Y4M8 146 aa6.82□□□□□ -1.32
PTPRM-203ENST00000400060 ACYP2P14621 99 aa6.81□□□□□ -1.32
PTPRM-203ENST00000400060 CEP295Q9C0D2 2601 aa6.81□□□□□ -1.32
PTPRM-203ENST00000400060 AVPP01185 164 aa6.81□□□□□ -1.32
PTPRM-203ENST00000400060 FAM229BQ4G0N7 80 aa6.81□□□□□ -1.32
PTPRM-203ENST00000400060 DNAH12Q6ZR08 3092 aa6.81□□□□□ -1.32
PTPRM-203ENST00000400060 C14orf177Q52M58 125 aa6.81□□□□□ -1.32
PTPRM-203ENST00000400060 A0A1B0GU69 56 aa6.8□□□□□ -1.32
PTPRM-203ENST00000400060 Q6ZRP5 223 aa6.8□□□□□ -1.32
PTPRM-203ENST00000400060 REG3GQ6UW15 175 aa6.79□□□□□ -1.32
PTPRM-203ENST00000400060 ZNF706Q9Y5V0 76 aaPredicted RBP6.79□□□□□ -1.32
PTPRM-203ENST00000400060 HIVEP3Q5T1R4 2406 aa6.79□□□□□ -1.32
PTPRM-203ENST00000400060 PCOTHQ58A44 107 aa6.79□□□□□ -1.32
PTPRM-203ENST00000400060 C22orf24Q9Y442 160 aa6.79□□□□□ -1.32
PTPRM-203ENST00000400060 COL27A1Q8IZC6 1860 aaPredicted RBP6.79□□□□□ -1.32
PTPRM-203ENST00000400060 ANKRD11Q6UB99 2663 aaPredicted RBP6.78□□□□□ -1.32
PTPRM-203ENST00000400060 PHF5AQ7RTV0 110 aaKnown RBP6.78□□□□□ -1.32
PTPRM-203ENST00000400060 A0A087WSZ3 146 aa6.78□□□□□ -1.32
PTPRM-203ENST00000400060 DEFB4AO15263 64 aa6.78□□□□□ -1.32
PTPRM-203ENST00000400060 MYO18BQ8IUG5 2567 aa6.77□□□□□ -1.33
PTPRM-203ENST00000400060 PLA2G2AP14555 144 aa6.77□□□□□ -1.33
PTPRM-203ENST00000400060 ASB16-AS1Q495Z4 193 aa6.77□□□□□ -1.33
PTPRM-203ENST00000400060 H3BS24 57 aa6.76□□□□□ -1.33
PTPRM-203ENST00000400060 C18orf65Q6ZTR6 163 aa6.76□□□□□ -1.33
PTPRM-203ENST00000400060 CEP350Q5VT06 3117 aa6.76□□□□□ -1.33
PTPRM-203ENST00000400060 LINC00528Q8N1L1 170 aa6.76□□□□□ -1.33
PTPRM-203ENST00000400060 MDFIQ99750 246 aa6.76□□□□□ -1.33
PTPRM-203ENST00000400060 FAM104AQ969W3 186 aa6.75□□□□□ -1.33
PTPRM-203ENST00000400060 KCNQ1DNQ9H478 68 aa6.75□□□□□ -1.33
PTPRM-203ENST00000400060 USP9XQ93008 2570 aaPredicted RBP6.75□□□□□ -1.33
PTPRM-203ENST00000400060 K7EQZ3 153 aa6.74□□□□□ -1.33
PTPRM-203ENST00000400060 MOBPQ13875 183 aa6.74□□□□□ -1.33
PTPRM-203ENST00000400060 Q6ZRX8 168 aa6.74□□□□□ -1.33
PTPRM-203ENST00000400060 C6orf48Q9UBA6 75 aa6.74□□□□□ -1.33
PTPRM-203ENST00000400060 LINC01554Q52M75 96 aa6.74□□□□□ -1.33
PTPRM-203ENST00000400060 Q5VV11 94 aa6.74□□□□□ -1.33
PTPRM-203ENST00000400060 USP9YO00507 2555 aaPredicted RBP6.72□□□□□ -1.33
PTPRM-203ENST00000400060 A8MWP4 228 aa6.72□□□□□ -1.33
PTPRM-203ENST00000400060 FSHBP01225 129 aa6.72□□□□□ -1.33
PTPRM-203ENST00000400060 Q8N9P0 234 aaPredicted RBP6.72□□□□□ -1.33
PTPRM-203ENST00000400060 BPTFQ12830 3046 aa6.71□□□□□ -1.33
PTPRM-203ENST00000400060 ABCA2Q9BZC7 2435 aa6.71□□□□□ -1.34
PTPRM-203ENST00000400060 LINC01558Q9Y6Z2 57 aa6.71□□□□□ -1.34
PTPRM-203ENST00000400060 UQCR11O14957 56 aa6.71□□□□□ -1.34
PTPRM-203ENST00000400060 C7orf33Q8WU49 177 aa6.7□□□□□ -1.34
PTPRM-203ENST00000400060 C16orf90A8MZG2 172 aa6.69□□□□□ -1.34
PTPRM-203ENST00000400060 LINC00476Q8WZB0 136 aa6.69□□□□□ -1.34
PTPRM-203ENST00000400060 IGLV5-48A0A075B6I7 105 aa6.69□□□□□ -1.34
PTPRM-203ENST00000400060 TLN2Q9Y4G6 2542 aa6.69□□□□□ -1.34
PTPRM-203ENST00000400060 IGLV1-51P01701 117 aa6.69□□□□□ -1.34
PTPRM-203ENST00000400060 MUC4Q99102 2169 aa6.68□□□□□ -1.34
PTPRM-203ENST00000400060 BRCA2P51587 3418 aa6.68□□□□□ -1.34
PTPRM-203ENST00000400060 DEFB116Q30KQ4 102 aa6.68□□□□□ -1.34
PTPRM-203ENST00000400060 C11orf45Q8TAV5 145 aa6.68□□□□□ -1.34
PTPRM-203ENST00000400060 M0R2N4 97 aa6.68□□□□□ -1.34
PTPRM-203ENST00000400060 HTTP42858 3142 aa6.67□□□□□ -1.34
PTPRM-203ENST00000400060 IGLV7-46A0A075B6I9 117 aa6.66□□□□□ -1.34
PTPRM-203ENST00000400060 INAFM1C9JVW0 142 aa6.66□□□□□ -1.34
PTPRM-203ENST00000400060 KRTAP10-9P60411 292 aa6.66□□□□□ -1.34
PTPRM-203ENST00000400060 ABCA12Q86UK0 2595 aa6.65□□□□□ -1.34
PTPRM-203ENST00000400060 A0A096LNT2 108 aa6.65□□□□□ -1.34
PTPRM-203ENST00000400060 MIR22HGQ0VDD5 57 aa6.65□□□□□ -1.34
PTPRM-203ENST00000400060 DEFB131BA0A096LNP1 70 aa6.65□□□□□ -1.35
PTPRM-203ENST00000400060 ST20-AS1Q8NBB2 130 aa6.65□□□□□ -1.35
PTPRM-203ENST00000400060 IGHV6-1A0A0B4J1U7 121 aa6.65□□□□□ -1.35
PTPRM-203ENST00000400060 OXLD1Q5BKU9 147 aa6.64□□□□□ -1.35
PTPRM-203ENST00000400060 PLA2G2DQ9UNK4 145 aa6.63□□□□□ -1.35
PTPRM-203ENST00000400060 Q8N377 158 aa6.63□□□□□ -1.35
PTPRM-203ENST00000400060 SPRR4Q96PI1 79 aa6.63□□□□□ -1.35
PTPRM-203ENST00000400060 SPTBN4Q9H254 2564 aa6.62□□□□□ -1.35
PTPRM-203ENST00000400060 CHD8Q9HCK8 2581 aa6.62□□□□□ -1.35
PTPRM-203ENST00000400060 H3BNG1 76 aa6.61□□□□□ -1.35
PTPRM-203ENST00000400060 IGKV2-24A0A0C4DH68 120 aa6.61□□□□□ -1.35
PTPRM-203ENST00000400060 SETD2Q9BYW2 2564 aaPredicted RBP6.6□□□□□ -1.35
PTPRM-203ENST00000400060 A0A1W2PNM2 257 aa6.59□□□□□ -1.35
PTPRM-203ENST00000400060 A0A096LNI7 61 aa6.59□□□□□ -1.35
PTPRM-203ENST00000400060 A0A087X002 238 aa6.59□□□□□ -1.35
PTPRM-203ENST00000400060 A6NN06 94 aa6.58□□□□□ -1.36
PTPRM-203ENST00000400060 LINC00313P59037 77 aa6.58□□□□□ -1.36
PTPRM-203ENST00000400060 CHD7Q9P2D1 2997 aa6.58□□□□□ -1.36
PTPRM-203ENST00000400060 FN1P02751 2386 aaKnown RBP6.58□□□□□ -1.36
PTPRM-203ENST00000400060 LCE6AA0A183 80 aa6.58□□□□□ -1.36
PTPRM-203ENST00000400060 DSCR10P59022 87 aa6.58□□□□□ -1.36
PTPRM-203ENST00000400060 ZCCHC13Q8WW36 166 aaKnown RBP6.58□□□□□ -1.36
PTPRM-203ENST00000400060 IGLV1-50A0A075B6I6 118 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms