RNA–Protein interactions for RNA: ENST00000399973.1

USP16-202, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 3

Gene USP16, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-202ENST00000399973 LINC00167Q96N53 147 aa5.11□□□□□ -1.59
USP16-202ENST00000399973 SND1-IT1Q9HBX3 110 aa5.11□□□□□ -1.59
USP16-202ENST00000399973 TP73-AS1Q9UF72 201 aa5.11□□□□□ -1.59
USP16-202ENST00000399973 TNXBP22105 4242 aa5.1□□□□□ -1.59
USP16-202ENST00000399973 KRTAP9-6A0A140TA67 174 aa5.1□□□□□ -1.59
USP16-202ENST00000399973 LINC00158P58513 81 aa5.1□□□□□ -1.59
USP16-202ENST00000399973 MEIG1Q5JSS6 88 aa5.1□□□□□ -1.59
USP16-202ENST00000399973 PRR26Q8N8Z3 221 aa5.1□□□□□ -1.59
USP16-202ENST00000399973 PMCHL2Q9BQD1 86 aa5.1□□□□□ -1.59
USP16-202ENST00000399973 KRTAP9-2Q9BYQ4 174 aa5.1□□□□□ -1.59
USP16-202ENST00000399973 HSPB8Q9UJY1 196 aa5.1□□□□□ -1.59
USP16-202ENST00000399973 IGLV5-37A0A075B6J1 123 aa5.09□□□□□ -1.59
USP16-202ENST00000399973 ATP6V1G1O75348 118 aa5.09□□□□□ -1.59
USP16-202ENST00000399973 COX17Q14061 63 aa5.09□□□□□ -1.59
USP16-202ENST00000399973 ZNF861PO60384 105 aa5.08□□□□□ -1.6
USP16-202ENST00000399973 BCE1O60756 84 aa5.08□□□□□ -1.6
USP16-202ENST00000399973 SMIM13P0DJ93 91 aa5.08□□□□□ -1.6
USP16-202ENST00000399973 VPREB1P12018 145 aa5.08□□□□□ -1.6
USP16-202ENST00000399973 PLNP26678 52 aa5.08□□□□□ -1.6
USP16-202ENST00000399973 RPL28P46779 137 aaKnown RBP5.08□□□□□ -1.6
USP16-202ENST00000399973 UBE2AP49459 152 aa5.08□□□□□ -1.6
USP16-202ENST00000399973 KRTAP10-8P60410 259 aa5.08□□□□□ -1.6
USP16-202ENST00000399973 RPL24P83731 157 aaKnown RBP5.08□□□□□ -1.6
USP16-202ENST00000399973 DPM2O94777 84 aa5.07□□□□□ -1.6
USP16-202ENST00000399973 TSPEAR-AS2P59090 65 aa5.07□□□□□ -1.6
USP16-202ENST00000399973 HERVK_113P61574 105 aa5.07□□□□□ -1.6
USP16-202ENST00000399973 Q8NDZ9 215 aa5.07□□□□□ -1.6
USP16-202ENST00000399973 MAP1LC3CQ9BXW4 147 aa5.07□□□□□ -1.6
USP16-202ENST00000399973 NDUFA12Q9UI09 145 aa5.07□□□□□ -1.6
USP16-202ENST00000399973 IGLV1-50A0A075B6I6 118 aa5.06□□□□□ -1.6
USP16-202ENST00000399973 MYMXA0A1B0GTQ4 84 aa5.06□□□□□ -1.6
USP16-202ENST00000399973 TMEM238C9JI98 176 aa5.06□□□□□ -1.6
USP16-202ENST00000399973 NCR3O14931 201 aa5.06□□□□□ -1.6
USP16-202ENST00000399973 HIST1H2BKO60814 126 aa5.06□□□□□ -1.6
USP16-202ENST00000399973 IGKCP01834 107 aa5.06□□□□□ -1.6
USP16-202ENST00000399973 HIST1H2BJP06899 126 aa5.06□□□□□ -1.6
USP16-202ENST00000399973 KRTAP1-4P0C5Y4 121 aa5.06□□□□□ -1.6
USP16-202ENST00000399973 HIST1H2BOP23527 126 aa5.06□□□□□ -1.6
USP16-202ENST00000399973 HIST1H2BBP33778 126 aa5.06□□□□□ -1.6
USP16-202ENST00000399973 HIST1H2BDP58876 126 aa5.06□□□□□ -1.6
USP16-202ENST00000399973 HIST1H2BCP62807 126 aa5.06□□□□□ -1.6
USP16-202ENST00000399973 HERV-K104P63124 156 aa5.06□□□□□ -1.6
USP16-202ENST00000399973 PRLHP81277 87 aa5.06□□□□□ -1.6
USP16-202ENST00000399973 HIST2H2BEQ16778 126 aa5.06□□□□□ -1.6
USP16-202ENST00000399973 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.06□□□□□ -1.6
USP16-202ENST00000399973 BOD1L2Q8IYS8 172 aa5.06□□□□□ -1.6
USP16-202ENST00000399973 MIR7-3HGQ8N6C7 128 aa5.06□□□□□ -1.6
USP16-202ENST00000399973 HIST1H2BHQ93079 126 aa5.06□□□□□ -1.6
USP16-202ENST00000399973 HIST1H2BNQ99877 126 aa5.06□□□□□ -1.6
USP16-202ENST00000399973 HIST1H2BMQ99879 126 aa5.06□□□□□ -1.6
USP16-202ENST00000399973 LEPROTO15243 131 aa5.05□□□□□ -1.6
USP16-202ENST00000399973 LGALS3P17931 250 aaKnown RBP5.05□□□□□ -1.6
USP16-202ENST00000399973 FAM19A1Q7Z5A9 133 aa5.05□□□□□ -1.6
USP16-202ENST00000399973 PLEKHB2Q96CS7 222 aa5.05□□□□□ -1.6
USP16-202ENST00000399973 TMEM126AQ9H061 195 aa5.05□□□□□ -1.6
USP16-202ENST00000399973 UBR4Q5T4S7 5183 aa5.05□□□□□ -1.6
USP16-202ENST00000399973 J3QQQ9 107 aa5.04□□□□□ -1.6
USP16-202ENST00000399973 RPL13AP40429 203 aaKnown RBP5.04□□□□□ -1.6
USP16-202ENST00000399973 DAND5Q8N907 189 aa5.04□□□□□ -1.6
USP16-202ENST00000399973 LINC00587B1AMM8 73 aa5.03□□□□□ -1.6
USP16-202ENST00000399973 SYS1-DBNDD2H3BUS1 97 aa5.02□□□□□ -1.61
USP16-202ENST00000399973 M0R378 163 aa5.02□□□□□ -1.61
USP16-202ENST00000399973 KRTAP13-1Q8IUC0 172 aa5.02□□□□□ -1.61
USP16-202ENST00000399973 MIEN1Q9BRT3 115 aa5.02□□□□□ -1.61
USP16-202ENST00000399973 NMUP48645 174 aa5.01□□□□□ -1.61
USP16-202ENST00000399973 NPC2P61916 151 aa5.01□□□□□ -1.61
USP16-202ENST00000399973 HIGD2AQ9BW72 106 aa5.01□□□□□ -1.61
USP16-202ENST00000399973 ANAPC11Q9NYG5 84 aa5.01□□□□□ -1.61
USP16-202ENST00000399973 A0A087X002 238 aa5□□□□□ -1.61
USP16-202ENST00000399973 PRYO14603 147 aa5□□□□□ -1.61
USP16-202ENST00000399973 CRYGAP11844 174 aa5□□□□□ -1.61
USP16-202ENST00000399973 KRTDAPP60985 99 aa5□□□□□ -1.61
USP16-202ENST00000399973 TRBV10-3A0A0K0K1G6 114 aa4.99□□□□□ -1.61
USP16-202ENST00000399973 ETDCA0A1B0GVM5 59 aa4.99□□□□□ -1.61
USP16-202ENST00000399973 E9PLD3 99 aa4.99□□□□□ -1.61
USP16-202ENST00000399973 S100A12P80511 92 aa4.99□□□□□ -1.61
USP16-202ENST00000399973 PET117Q6UWS5 81 aa4.99□□□□□ -1.61
USP16-202ENST00000399973 TYMSOSQ8TAI1 123 aa4.99□□□□□ -1.61
USP16-202ENST00000399973 IGKV2D-26A0A0A0MRZ7 120 aa4.98□□□□□ -1.61
USP16-202ENST00000399973 A0A0J9YXY3 114 aa4.98□□□□□ -1.61
USP16-202ENST00000399973 TSPAN13O95857 204 aa4.98□□□□□ -1.61
USP16-202ENST00000399973 C3orf79P0CE67 100 aa4.98□□□□□ -1.61
USP16-202ENST00000399973 LINC01545Q5VT33 79 aa4.98□□□□□ -1.61
USP16-202ENST00000399973 C20orf202A1L168 122 aa4.97□□□□□ -1.61
USP16-202ENST00000399973 ZNF815PA8K554 130 aa4.97□□□□□ -1.61
USP16-202ENST00000399973 DDTP30046 118 aa4.97□□□□□ -1.61
USP16-202ENST00000399973 S100A7L2Q5SY68 101 aa4.97□□□□□ -1.61
USP16-202ENST00000399973 SPANXB1Q9NS25 103 aaPredicted RBP4.97□□□□□ -1.61
USP16-202ENST00000399973 LRP2P98164 4655 aa4.97□□□□□ -1.61
USP16-202ENST00000399973 PRR4Q16378 134 aa4.96□□□□□ -1.62
USP16-202ENST00000399973 FAM229BQ4G0N7 80 aa4.96□□□□□ -1.62
USP16-202ENST00000399973 KRTAP13-2Q52LG2 175 aa4.96□□□□□ -1.62
USP16-202ENST00000399973 COA6Q5JTJ3 125 aaKnown RBP4.96□□□□□ -1.62
USP16-202ENST00000399973 LINC00337Q8N6G1 96 aa4.96□□□□□ -1.62
USP16-202ENST00000399973 TRBV10-2A0A0K0K1G8 114 aa4.95□□□□□ -1.62
USP16-202ENST00000399973 TMEM238LA0A1B0GVL6 79 aa4.95□□□□□ -1.62
USP16-202ENST00000399973 ADAMTSL4-AS1Q5T5F5 129 aa4.95□□□□□ -1.62
USP16-202ENST00000399973 SOSTDC1Q6X4U4 206 aa4.95□□□□□ -1.62
USP16-202ENST00000399973 ATOH7Q8N100 152 aa4.95□□□□□ -1.62
USP16-202ENST00000399973 TTTY13Q9BZ97 58 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms