RNA–Protein interactions for RNA: ENST00000398541.2

RPS4XP3-201, Transcript of ribosomal protein S4X pseudogene 3, humanhuman

BASIC

Gene RPS4XP3, Length 413 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP3-201ENST00000398541 NREPQ16612 68 aa1.13□□□□□ -2.23
RPS4XP3-201ENST00000398541 GNG13Q9P2W3 67 aa1.13□□□□□ -2.23
RPS4XP3-201ENST00000398541 KIAA0556O60303 1618 aa1.13□□□□□ -2.23
RPS4XP3-201ENST00000398541 LRRC7Q96NW7 1537 aa1.13□□□□□ -2.23
RPS4XP3-201ENST00000398541 TULP4Q9NRJ4 1543 aa1.13□□□□□ -2.23
RPS4XP3-201ENST00000398541 CDC42BPGQ6DT37 1551 aa1.13□□□□□ -2.23
RPS4XP3-201ENST00000398541 LAMC1P11047 1609 aa1.12□□□□□ -2.23
RPS4XP3-201ENST00000398541 FXYD6-FXYD2A0A087WZ82 144 aa1.12□□□□□ -2.23
RPS4XP3-201ENST00000398541 COX7BP24311 80 aa1.12□□□□□ -2.23
RPS4XP3-201ENST00000398541 C10orf95Q9H7T3 257 aa1.12□□□□□ -2.23
RPS4XP3-201ENST00000398541 UBR3Q6ZT12 1888 aa1.12□□□□□ -2.23
RPS4XP3-201ENST00000398541 ABCA9Q8IUA7 1624 aa1.11□□□□□ -2.23
RPS4XP3-201ENST00000398541 CACNA1EQ15878 2313 aa1.11□□□□□ -2.23
RPS4XP3-201ENST00000398541 A0A0D9SFI3 127 aa1.11□□□□□ -2.23
RPS4XP3-201ENST00000398541 KRTAP21-2Q3LI59 83 aa1.11□□□□□ -2.23
RPS4XP3-201ENST00000398541 DIP2AQ14689 1571 aa1.11□□□□□ -2.23
RPS4XP3-201ENST00000398541 THOC2Q8NI27 1593 aaKnown RBP1.11□□□□□ -2.23
RPS4XP3-201ENST00000398541 TNCP24821 2201 aa1.1□□□□□ -2.23
RPS4XP3-201ENST00000398541 I3L2K1 104 aa1.1□□□□□ -2.23
RPS4XP3-201ENST00000398541 ARL14EPLP0DKL9 152 aa1.1□□□□□ -2.23
RPS4XP3-201ENST00000398541 KRTAP10-4P60372 401 aaPredicted RBP1.1□□□□□ -2.23
RPS4XP3-201ENST00000398541 SMIM5Q71RC9 77 aa1.1□□□□□ -2.23
RPS4XP3-201ENST00000398541 TP53AIP1Q9HCN2 124 aa1.1□□□□□ -2.23
RPS4XP3-201ENST00000398541 PAPPAQ13219 1627 aa1.1□□□□□ -2.23
RPS4XP3-201ENST00000398541 LMTK2Q8IWU2 1503 aa1.1□□□□□ -2.23
RPS4XP3-201ENST00000398541 C2CD3Q4AC94 2353 aa1.1□□□□□ -2.23
RPS4XP3-201ENST00000398541 A0A0D9SG42 100 aa1.09□□□□□ -2.23
RPS4XP3-201ENST00000398541 CNFNQ9BYD5 112 aa1.09□□□□□ -2.23
RPS4XP3-201ENST00000398541 LRRC37AA6NMS7 1700 aa1.09□□□□□ -2.24
RPS4XP3-201ENST00000398541 TIAM2Q8IVF5 1701 aa1.09□□□□□ -2.24
RPS4XP3-201ENST00000398541 ZNF462Q96JM2 2506 aa1.09□□□□□ -2.24
RPS4XP3-201ENST00000398541 BCORQ6W2J9 1755 aa1.08□□□□□ -2.24
RPS4XP3-201ENST00000398541 CCDC180Q9P1Z9 1646 aa1.08□□□□□ -2.24
RPS4XP3-201ENST00000398541 PIGYQ3MUY2 71 aa1.08□□□□□ -2.24
RPS4XP3-201ENST00000398541 DEFB123Q8N688 67 aa1.08□□□□□ -2.24
RPS4XP3-201ENST00000398541 SPTBN2O15020 2390 aa1.08□□□□□ -2.24
RPS4XP3-201ENST00000398541 CACNA1HO95180 2353 aa1.08□□□□□ -2.24
RPS4XP3-201ENST00000398541 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.07□□□□□ -2.24
RPS4XP3-201ENST00000398541 HELZ2Q9BYK8 2649 aaKnown RBP1.07□□□□□ -2.24
RPS4XP3-201ENST00000398541 PLCH1Q4KWH8 1693 aa1.07□□□□□ -2.24
RPS4XP3-201ENST00000398541 CPSF4LA6NMK7 179 aaKnown RBP1.07□□□□□ -2.24
RPS4XP3-201ENST00000398541 CRIPTQ9P021 101 aa1.07□□□□□ -2.24
RPS4XP3-201ENST00000398541 TIAM1Q13009 1591 aa1.07□□□□□ -2.24
RPS4XP3-201ENST00000398541 CNOT1A5YKK6 2376 aaKnown RBP1.07□□□□□ -2.24
RPS4XP3-201ENST00000398541 ASH1LQ9NR48 2969 aaKnown RBP1.07□□□□□ -2.24
RPS4XP3-201ENST00000398541 NHSQ6T4R5 1651 aa1.07□□□□□ -2.24
RPS4XP3-201ENST00000398541 EEA1Q15075 1411 aa1.06□□□□□ -2.24
RPS4XP3-201ENST00000398541 POLR1AO95602 1720 aaPredicted RBP1.06□□□□□ -2.24
RPS4XP3-201ENST00000398541 COL14A1Q05707 1796 aaKnown RBP1.06□□□□□ -2.24
RPS4XP3-201ENST00000398541 SPTY2D1-AS1A0A0U1RR47 76 aa1.06□□□□□ -2.24
RPS4XP3-201ENST00000398541 RPL38P63173 70 aaKnown RBP1.06□□□□□ -2.24
RPS4XP3-201ENST00000398541 CICQ96RK0 1608 aaPredicted RBP1.06□□□□□ -2.24
RPS4XP3-201ENST00000398541 PTPRZ1P23471 2315 aaPredicted RBP1.06□□□□□ -2.24
RPS4XP3-201ENST00000398541 WIZO95785 1651 aa1.06□□□□□ -2.24
RPS4XP3-201ENST00000398541 DOT1LQ8TEK3 1739 aa1.06□□□□□ -2.24
RPS4XP3-201ENST00000398541 FMN2Q9NZ56 1722 aa1.06□□□□□ -2.24
RPS4XP3-201ENST00000398541 MUC6Q6W4X9 2439 aa1.06□□□□□ -2.24
RPS4XP3-201ENST00000398541 RALGAPBQ86X10 1494 aa1.05□□□□□ -2.24
RPS4XP3-201ENST00000398541 PREX2Q70Z35 1606 aa1.05□□□□□ -2.24
RPS4XP3-201ENST00000398541 CFAP43Q8NDM7 1665 aa1.05□□□□□ -2.24
RPS4XP3-201ENST00000398541 LINC01549A6NIU2 74 aa1.05□□□□□ -2.24
RPS4XP3-201ENST00000398541 NDUFA4O00483 81 aa1.05□□□□□ -2.24
RPS4XP3-201ENST00000398541 ENHOQ6UWT2 76 aa1.05□□□□□ -2.24
RPS4XP3-201ENST00000398541 USMG5Q96IX5 58 aa1.05□□□□□ -2.24
RPS4XP3-201ENST00000398541 QSER1Q2KHR3 1735 aa1.05□□□□□ -2.24
RPS4XP3-201ENST00000398541 PARP4Q9UKK3 1724 aaKnown RBP1.05□□□□□ -2.24
RPS4XP3-201ENST00000398541 EIF2AK4Q9P2K8 1649 aaKnown RBP1.04□□□□□ -2.24
RPS4XP3-201ENST00000398541 USF3Q68DE3 2245 aa1.04□□□□□ -2.24
RPS4XP3-201ENST00000398541 K7EQZ3 153 aa1.04□□□□□ -2.24
RPS4XP3-201ENST00000398541 COX6A2Q02221 97 aa1.04□□□□□ -2.24
RPS4XP3-201ENST00000398541 FAM103A1Q9BTL3 118 aaKnown RBP1.04□□□□□ -2.24
RPS4XP3-201ENST00000398541 F8P00451 2351 aa1.04□□□□□ -2.24
RPS4XP3-201ENST00000398541 PREX1Q8TCU6 1659 aa1.04□□□□□ -2.24
RPS4XP3-201ENST00000398541 I3L3M4 83 aa1.03□□□□□ -2.24
RPS4XP3-201ENST00000398541 PRO0255Q9UI72 69 aa1.03□□□□□ -2.24
RPS4XP3-201ENST00000398541 PLXNC1O60486 1568 aa1.03□□□□□ -2.24
RPS4XP3-201ENST00000398541 PTPRQQ9UMZ3 2332 aa1.03□□□□□ -2.25
RPS4XP3-201ENST00000398541 SPTBN1Q01082 2364 aaKnown RBP1.02□□□□□ -2.25
RPS4XP3-201ENST00000398541 RICTORQ6R327 1708 aa1.02□□□□□ -2.25
RPS4XP3-201ENST00000398541 Q8IZM0 81 aa1.02□□□□□ -2.25
RPS4XP3-201ENST00000398541 UBL5Q9BZL1 73 aa1.02□□□□□ -2.25
RPS4XP3-201ENST00000398541 ABCA6Q8N139 1617 aa1.01□□□□□ -2.25
RPS4XP3-201ENST00000398541 PIEZO2Q9H5I5 2752 aa1□□□□□ -2.25
RPS4XP3-201ENST00000398541 MRPL34Q9BQ48 92 aaKnown RBP1□□□□□ -2.25
RPS4XP3-201ENST00000398541 TSC2P49815 1807 aa1□□□□□ -2.25
RPS4XP3-201ENST00000398541 ALS2Q96Q42 1657 aa1□□□□□ -2.25
RPS4XP3-201ENST00000398541 PRB3Q04118 309 aaPredicted RBP0.99□□□□□ -2.25
RPS4XP3-201ENST00000398541 KCNQ1DNQ9H478 68 aa0.99□□□□□ -2.25
RPS4XP3-201ENST00000398541 GLI2P10070 1586 aa0.99□□□□□ -2.25
RPS4XP3-201ENST00000398541 NWD1Q149M9 1564 aa0.99□□□□□ -2.25
RPS4XP3-201ENST00000398541 PRXQ9BXM0 1461 aa0.99□□□□□ -2.25
RPS4XP3-201ENST00000398541 NRAPQ86VF7 1730 aa0.98□□□□□ -2.25
RPS4XP3-201ENST00000398541 COX6B1P14854 86 aa0.98□□□□□ -2.25
RPS4XP3-201ENST00000398541 CRCT1Q9UGL9 99 aa0.98□□□□□ -2.25
RPS4XP3-201ENST00000398541 TTC28Q96AY4 2481 aa0.98□□□□□ -2.25
RPS4XP3-201ENST00000398541 ABCC6O95255 1503 aa0.98□□□□□ -2.25
RPS4XP3-201ENST00000398541 ABCA10Q8WWZ4 1543 aa0.98□□□□□ -2.25
RPS4XP3-201ENST00000398541 CCL22O00626 93 aa0.97□□□□□ -2.25
RPS4XP3-201ENST00000398541 GVINP1Q7Z2Y8 2422 aa0.97□□□□□ -2.25
RPS4XP3-201ENST00000398541 MAST1Q9Y2H9 1570 aa0.96□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms