RNA–Protein interactions for RNA: ENST00000397428.7

SYNE4-203, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 382 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-203ENST00000397428 FA2HQ7L5A8 372 aa6.74□□□□□ -1.33
SYNE4-203ENST00000397428 LINC00337Q8N6G1 96 aa6.74□□□□□ -1.33
SYNE4-203ENST00000397428 ZNF625Q96I27 306 aaPredicted RBP6.74□□□□□ -1.33
SYNE4-203ENST00000397428 HIGD2AQ9BW72 106 aa6.74□□□□□ -1.33
SYNE4-203ENST00000397428 A0A096LNJ9 63 aa6.73□□□□□ -1.33
SYNE4-203ENST00000397428 TMEM238LA0A1B0GVL6 79 aa6.73□□□□□ -1.33
SYNE4-203ENST00000397428 SFTA2Q6UW10 78 aa6.73□□□□□ -1.33
SYNE4-203ENST00000397428 KRTAP4-1Q9BYQ7 146 aa6.73□□□□□ -1.33
SYNE4-203ENST00000397428 NDUFA6P56556 154 aa6.72□□□□□ -1.33
SYNE4-203ENST00000397428 COX19Q49B96 90 aa6.72□□□□□ -1.33
SYNE4-203ENST00000397428 SMCO4Q9NRQ5 59 aa6.72□□□□□ -1.33
SYNE4-203ENST00000397428 TMEM218A2RU14 115 aa6.71□□□□□ -1.34
SYNE4-203ENST00000397428 SPINK1P00995 79 aa6.71□□□□□ -1.34
SYNE4-203ENST00000397428 LINC01547P58512 204 aaPredicted RBP6.71□□□□□ -1.34
SYNE4-203ENST00000397428 DAND5Q8N907 189 aa6.71□□□□□ -1.34
SYNE4-203ENST00000397428 Q8NBF4 154 aa6.71□□□□□ -1.34
SYNE4-203ENST00000397428 URB1-AS1Q96HZ7 61 aa6.71□□□□□ -1.34
SYNE4-203ENST00000397428 ZNF706Q9Y5V0 76 aaPredicted RBP6.71□□□□□ -1.34
SYNE4-203ENST00000397428 C11orf86A6NJI1 115 aa6.7□□□□□ -1.34
SYNE4-203ENST00000397428 LINC00614P0C842 121 aa6.7□□□□□ -1.34
SYNE4-203ENST00000397428 S100PP25815 95 aa6.7□□□□□ -1.34
SYNE4-203ENST00000397428 SPRR1AP35321 89 aa6.7□□□□□ -1.34
SYNE4-203ENST00000397428 LINC00158P58513 81 aa6.7□□□□□ -1.34
SYNE4-203ENST00000397428 FABP9Q0Z7S8 132 aa6.7□□□□□ -1.34
SYNE4-203ENST00000397428 CLLU1Q5K131 121 aa6.7□□□□□ -1.34
SYNE4-203ENST00000397428 SMCR5Q8TEV8 140 aa6.7□□□□□ -1.34
SYNE4-203ENST00000397428 KRTAP4-16G5E9R7 235 aaPredicted RBP6.69□□□□□ -1.34
SYNE4-203ENST00000397428 SEC61BP60468 96 aaKnown RBP6.69□□□□□ -1.34
SYNE4-203ENST00000397428 BAGE3Q86Y29 109 aa6.69□□□□□ -1.34
SYNE4-203ENST00000397428 KCNQ1DNQ9H478 68 aa6.69□□□□□ -1.34
SYNE4-203ENST00000397428 LINC00483Q53H64 154 aa6.68□□□□□ -1.34
SYNE4-203ENST00000397428 TMEM170BQ5T4T1 132 aa6.68□□□□□ -1.34
SYNE4-203ENST00000397428 UQCC3Q6UW78 93 aa6.68□□□□□ -1.34
SYNE4-203ENST00000397428 PRYO14603 147 aa6.67□□□□□ -1.34
SYNE4-203ENST00000397428 HBDP02042 147 aa6.66□□□□□ -1.34
SYNE4-203ENST00000397428 C18orf32Q8TCD1 76 aa6.66□□□□□ -1.34
SYNE4-203ENST00000397428 SEC11CQ9BY50 192 aa6.66□□□□□ -1.34
SYNE4-203ENST00000397428 A0A0U1RRA0 63 aa6.65□□□□□ -1.34
SYNE4-203ENST00000397428 TMEM223A0PJW6 202 aa6.65□□□□□ -1.34
SYNE4-203ENST00000397428 RPS29P62273 56 aaKnown RBP6.65□□□□□ -1.34
SYNE4-203ENST00000397428 PMCHL1Q16048 86 aa6.65□□□□□ -1.34
SYNE4-203ENST00000397428 SSBP3-AS1Q7Z2R9 100 aa6.65□□□□□ -1.34
SYNE4-203ENST00000397428 SMIM13P0DJ93 91 aa6.64□□□□□ -1.35
SYNE4-203ENST00000397428 LCE2CQ5TA81 110 aa6.64□□□□□ -1.35
SYNE4-203ENST00000397428 BOD1L2Q8IYS8 172 aa6.64□□□□□ -1.35
SYNE4-203ENST00000397428 Q8N377 158 aa6.64□□□□□ -1.35
SYNE4-203ENST00000397428 CHTOPQ9Y3Y2 248 aaKnown RBP6.64□□□□□ -1.35
SYNE4-203ENST00000397428 FSIP2Q5CZC0 6907 aa6.63□□□□□ -1.35
SYNE4-203ENST00000397428 XP32Q5T750 250 aa6.63□□□□□ -1.35
SYNE4-203ENST00000397428 CRCT1Q9UGL9 99 aa6.63□□□□□ -1.35
SYNE4-203ENST00000397428 ETDCA0A1B0GVM5 59 aa6.62□□□□□ -1.35
SYNE4-203ENST00000397428 B5MCH6 92 aa6.62□□□□□ -1.35
SYNE4-203ENST00000397428 NCR3O14931 201 aa6.62□□□□□ -1.35
SYNE4-203ENST00000397428 SLC25A20O43772 301 aa6.62□□□□□ -1.35
SYNE4-203ENST00000397428 ATP6V1G1O75348 118 aa6.62□□□□□ -1.35
SYNE4-203ENST00000397428 ERC2-IT1O76042 136 aa6.62□□□□□ -1.35
SYNE4-203ENST00000397428 C10orf91Q5T1B1 145 aa6.62□□□□□ -1.35
SYNE4-203ENST00000397428 GAGE2AQ6NT46 116 aa6.62□□□□□ -1.35
SYNE4-203ENST00000397428 TRAPPC1Q9Y5R8 145 aa6.62□□□□□ -1.35
SYNE4-203ENST00000397428 TRBV10-3A0A0K0K1G6 114 aa6.61□□□□□ -1.35
SYNE4-203ENST00000397428 MIR7-3HGQ8N6C7 128 aa6.61□□□□□ -1.35
SYNE4-203ENST00000397428 NDUFA12Q9UI09 145 aa6.61□□□□□ -1.35
SYNE4-203ENST00000397428 TRAV12-1A0A0B4J245 112 aa6.6□□□□□ -1.35
SYNE4-203ENST00000397428 LOC107984156A0A0G2JMH3 177 aa6.6□□□□□ -1.35
SYNE4-203ENST00000397428 LINC00587B1AMM8 73 aa6.6□□□□□ -1.35
SYNE4-203ENST00000397428 GHRHP01286 108 aa6.6□□□□□ -1.35
SYNE4-203ENST00000397428 HERV-K104P63124 156 aa6.6□□□□□ -1.35
SYNE4-203ENST00000397428 MOBPQ13875 183 aa6.6□□□□□ -1.35
SYNE4-203ENST00000397428 ARL17AQ8IVW1 177 aa6.6□□□□□ -1.35
SYNE4-203ENST00000397428 FAM19A2Q8N3H0 131 aa6.6□□□□□ -1.35
SYNE4-203ENST00000397428 IGLV9-49A0A0B4J1Y8 123 aa6.59□□□□□ -1.35
SYNE4-203ENST00000397428 IFITM2Q01629 132 aa6.59□□□□□ -1.35
SYNE4-203ENST00000397428 RHEBQ15382 184 aa6.59□□□□□ -1.35
SYNE4-203ENST00000397428 RPS10P5Q9NQ39 176 aa6.59□□□□□ -1.35
SYNE4-203ENST00000397428 KRTAP19-2Q3LHN2 52 aa6.58□□□□□ -1.36
SYNE4-203ENST00000397428 MEIG1Q5JSS6 88 aa6.58□□□□□ -1.36
SYNE4-203ENST00000397428 IFI27L1Q96BM0 104 aa6.58□□□□□ -1.36
SYNE4-203ENST00000397428 Q9BRP9 147 aa6.58□□□□□ -1.36
SYNE4-203ENST00000397428 TMA7Q9Y2S6 64 aaKnown RBP6.58□□□□□ -1.36
SYNE4-203ENST00000397428 TRBV10-2A0A0K0K1G8 114 aa6.57□□□□□ -1.36
SYNE4-203ENST00000397428 S100A12P80511 92 aa6.57□□□□□ -1.36
SYNE4-203ENST00000397428 MYMXA0A1B0GTQ4 84 aa6.56□□□□□ -1.36
SYNE4-203ENST00000397428 Q6ZRX8 168 aa6.56□□□□□ -1.36
SYNE4-203ENST00000397428 CHCHD1Q96BP2 118 aaKnown RBP6.56□□□□□ -1.36
SYNE4-203ENST00000397428 MAP1LC3CQ9BXW4 147 aa6.56□□□□□ -1.36
SYNE4-203ENST00000397428 DDTP30046 118 aa6.55□□□□□ -1.36
SYNE4-203ENST00000397428 MT1HP80294 61 aa6.53□□□□□ -1.36
SYNE4-203ENST00000397428 COMMD7Q86VX2 200 aa6.53□□□□□ -1.36
SYNE4-203ENST00000397428 IGLV6-57P01721 117 aa6.52□□□□□ -1.37
SYNE4-203ENST00000397428 C5orf52A6NGY3 159 aa6.51□□□□□ -1.37
SYNE4-203ENST00000397428 LEPROTO15243 131 aa6.51□□□□□ -1.37
SYNE4-203ENST00000397428 EIF4EBP3O60516 100 aaPredicted RBP6.51□□□□□ -1.37
SYNE4-203ENST00000397428 NDUFC2O95298 119 aa6.51□□□□□ -1.37
SYNE4-203ENST00000397428 TSPEAR-AS2P59090 65 aa6.51□□□□□ -1.37
SYNE4-203ENST00000397428 JOSD1Q15040 202 aaPredicted RBP6.5□□□□□ -1.37
SYNE4-203ENST00000397428 SPANXB1Q9NS25 103 aaPredicted RBP6.5□□□□□ -1.37
SYNE4-203ENST00000397428 PCOTHQ58A44 107 aa6.49□□□□□ -1.37
SYNE4-203ENST00000397428 ST20-AS1Q8NBB2 130 aa6.49□□□□□ -1.37
SYNE4-203ENST00000397428 YPEL4Q96NS1 127 aa6.49□□□□□ -1.37
SYNE4-203ENST00000397428 CFC1BP0CG36 223 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms