RNA–Protein interactions for RNA: ENST00000396634.5

HLA-A-204, Transcript of major histocompatibility complex, class I, A, humanhuman

APPRIS P1 BASIC

Gene HLA-A, Length 1,868 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-204ENST00000396634 A0A0J9YXY3 114 aa11.46□□□□□ -0.57
HLA-A-204ENST00000396634 H7C2G1 150 aa11.46□□□□□ -0.57
HLA-A-204ENST00000396634 LECT2O14960 151 aa11.46□□□□□ -0.57
HLA-A-204ENST00000396634 CSDC2Q9Y534 153 aaKnown RBP11.46□□□□□ -0.58
HLA-A-204ENST00000396634 PSCAO43653 123 aa11.45□□□□□ -0.58
HLA-A-204ENST00000396634 TIMM17BO60830 172 aa11.45□□□□□ -0.58
HLA-A-204ENST00000396634 PPDPFQ9H3Y8 114 aa11.45□□□□□ -0.58
HLA-A-204ENST00000396634 IGLV4-3A0A075B6K6 122 aa11.44□□□□□ -0.58
HLA-A-204ENST00000396634 ZNF22P17026 224 aaPredicted RBP11.44□□□□□ -0.58
HLA-A-204ENST00000396634 FUSP35637 526 aaKnown RBP eCLIP11.44□□□□□ -0.58
HLA-A-204ENST00000396634 TIMM21Q9BVV7 248 aa11.44□□□□□ -0.58
HLA-A-204ENST00000396634 C1orf43Q9BWL3 253 aa11.44□□□□□ -0.58
HLA-A-204ENST00000396634 TRAV13-1A0A0B4J241 112 aa11.44□□□□□ -0.58
HLA-A-204ENST00000396634 MIAQ16674 131 aa11.44□□□□□ -0.58
HLA-A-204ENST00000396634 FAM236AA0A1B0GUQ0 79 aa11.43□□□□□ -0.58
HLA-A-204ENST00000396634 FAM236BA0A1B0GV22 79 aa11.43□□□□□ -0.58
HLA-A-204ENST00000396634 PKD1P98161 4303 aa11.43□□□□□ -0.58
HLA-A-204ENST00000396634 KRTAP26-1Q6PEX3 210 aa11.42□□□□□ -0.58
HLA-A-204ENST00000396634 OR13C6PQ8NH95 151 aa11.42□□□□□ -0.58
HLA-A-204ENST00000396634 COPS9Q8WXC6 57 aa11.42□□□□□ -0.58
HLA-A-204ENST00000396634 LINC00959A0A1B0GUT2 108 aa11.42□□□□□ -0.58
HLA-A-204ENST00000396634 XCL1P47992 114 aa11.42□□□□□ -0.58
HLA-A-204ENST00000396634 SDIM1Q6ZPB5 146 aa11.42□□□□□ -0.58
HLA-A-204ENST00000396634 CHCHD10Q8WYQ3 142 aaPredicted RBP11.41□□□□□ -0.58
HLA-A-204ENST00000396634 LITAFQ99732 161 aa11.4□□□□□ -0.58
HLA-A-204ENST00000396634 PYGO1Q9Y3Y4 419 aa11.4□□□□□ -0.58
HLA-A-204ENST00000396634 PKHD1P08F94 4074 aa11.4□□□□□ -0.58
HLA-A-204ENST00000396634 DNAH11Q96DT5 4516 aa11.4□□□□□ -0.58
HLA-A-204ENST00000396634 HECTD4Q9Y4D8 3996 aa11.4□□□□□ -0.58
HLA-A-204ENST00000396634 EPPK1P58107 5090 aaKnown RBP11.4□□□□□ -0.58
HLA-A-204ENST00000396634 CRYGAP11844 174 aa11.4□□□□□ -0.59
HLA-A-204ENST00000396634 COX7CP15954 63 aa11.4□□□□□ -0.59
HLA-A-204ENST00000396634 HERVK_113P63121 156 aa11.39□□□□□ -0.59
HLA-A-204ENST00000396634 MRPS36P82909 103 aaKnown RBP11.39□□□□□ -0.59
HLA-A-204ENST00000396634 ATOX1O00244 68 aa11.38□□□□□ -0.59
HLA-A-204ENST00000396634 C5orf38Q86SI9 138 aa11.38□□□□□ -0.59
HLA-A-204ENST00000396634 DAND5Q8N907 189 aa11.38□□□□□ -0.59
HLA-A-204ENST00000396634 RMI2Q96E14 147 aa11.38□□□□□ -0.59
HLA-A-204ENST00000396634 IGHV1-58A0A0C4DH39 117 aa11.38□□□□□ -0.59
HLA-A-204ENST00000396634 LRCOL1A6NCL2 159 aa11.38□□□□□ -0.59
HLA-A-204ENST00000396634 A0A087WTM6 91 aa11.37□□□□□ -0.59
HLA-A-204ENST00000396634 INAFM2P0DMQ5 153 aa11.37□□□□□ -0.59
HLA-A-204ENST00000396634 PRSS2P07478 247 aa11.36□□□□□ -0.59
HLA-A-204ENST00000396634 SS18Q15532 418 aa11.36□□□□□ -0.59
HLA-A-204ENST00000396634 LINC00336Q6ZUF6 198 aa11.36□□□□□ -0.59
HLA-A-204ENST00000396634 TRACP01848 142 aa11.35□□□□□ -0.59
HLA-A-204ENST00000396634 GAGE2AQ6NT46 116 aa11.35□□□□□ -0.59
HLA-A-204ENST00000396634 NDUFA12Q9UI09 145 aa11.35□□□□□ -0.59
HLA-A-204ENST00000396634 A0A1B0GVY2 172 aa11.34□□□□□ -0.59
HLA-A-204ENST00000396634 KRTAP10-2P60368 255 aa11.34□□□□□ -0.59
HLA-A-204ENST00000396634 USP17L23D6RBM5 183 aa11.34□□□□□ -0.59
HLA-A-204ENST00000396634 COX7A2LO14548 114 aa11.34□□□□□ -0.59
HLA-A-204ENST00000396634 COX6A2Q02221 97 aa11.34□□□□□ -0.59
HLA-A-204ENST00000396634 CIRBPQ14011 172 aaKnown RBP11.34□□□□□ -0.59
HLA-A-204ENST00000396634 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.33□□□□□ -0.6
HLA-A-204ENST00000396634 A0A0J9YXV3 536 aa11.33□□□□□ -0.6
HLA-A-204ENST00000396634 TINCRA0A1B0GVN0 87 aa11.32□□□□□ -0.6
HLA-A-204ENST00000396634 TMEM258P61165 79 aa11.32□□□□□ -0.6
HLA-A-204ENST00000396634 HIST1H4AP62805 103 aaKnown RBP11.32□□□□□ -0.6
HLA-A-204ENST00000396634 LINC00242Q5T6M2 205 aa11.32□□□□□ -0.6
HLA-A-204ENST00000396634 CLEC2BQ92478 149 aa11.32□□□□□ -0.6
HLA-A-204ENST00000396634 CD164L2Q6UWJ8 174 aa11.31□□□□□ -0.6
HLA-A-204ENST00000396634 FAM19A5Q7Z5A7 132 aaPredicted RBP11.31□□□□□ -0.6
HLA-A-204ENST00000396634 HIGD2BQ4VC39 106 aa11.3□□□□□ -0.6
HLA-A-204ENST00000396634 C15orf56Q8N910 161 aa11.3□□□□□ -0.6
HLA-A-204ENST00000396634 Q8N814 137 aa11.29□□□□□ -0.6
HLA-A-204ENST00000396634 DNAH5Q8TE73 4624 aa11.29□□□□□ -0.6
HLA-A-204ENST00000396634 IGHV3-64A0A075B6Q5 118 aa11.28□□□□□ -0.6
HLA-A-204ENST00000396634 IGHV3OR16-9A0A0B4J2B5 98 aa11.27□□□□□ -0.6
HLA-A-204ENST00000396634 ADAMTSL4-AS1Q5T5F5 129 aa11.27□□□□□ -0.6
HLA-A-204ENST00000396634 C2orf48Q96LS8 159 aa11.27□□□□□ -0.6
HLA-A-204ENST00000396634 NDUFA1O15239 70 aa11.27□□□□□ -0.61
HLA-A-204ENST00000396634 MALP21145 153 aa11.25□□□□□ -0.61
HLA-A-204ENST00000396634 SMCR5Q8TEV8 140 aa11.25□□□□□ -0.61
HLA-A-204ENST00000396634 CDKN2A-AS1Q9UH64 79 aa11.25□□□□□ -0.61
HLA-A-204ENST00000396634 RPL18AQ02543 176 aaKnown RBP11.24□□□□□ -0.61
HLA-A-204ENST00000396634 LOC107984640A0A0U1RRK4 108 aa11.23□□□□□ -0.61
HLA-A-204ENST00000396634 SLPIP03973 132 aa11.23□□□□□ -0.61
HLA-A-204ENST00000396634 BAALC-AS2P0C853 105 aa11.23□□□□□ -0.61
HLA-A-204ENST00000396634 SERP2Q8N6R1 65 aa11.22□□□□□ -0.61
HLA-A-204ENST00000396634 IGLV5-45A0A087WSX0 123 aa11.21□□□□□ -0.61
HLA-A-204ENST00000396634 IGLV5-52A0A0A0MRZ9 124 aa11.21□□□□□ -0.61
HLA-A-204ENST00000396634 Q6JHZ5 121 aa11.21□□□□□ -0.61
HLA-A-204ENST00000396634 FAM19A3Q7Z5A8 133 aa11.21□□□□□ -0.61
HLA-A-204ENST00000396634 DYNC1H1Q14204 4646 aaKnown RBP11.21□□□□□ -0.62
HLA-A-204ENST00000396634 A0A087WZ39 114 aa11.21□□□□□ -0.62
HLA-A-204ENST00000396634 NDUFC2-KCTD14E9PQ53 114 aa11.21□□□□□ -0.62
HLA-A-204ENST00000396634 LINC00308Q8TCZ7 52 aa11.21□□□□□ -0.62
HLA-A-204ENST00000396634 GVQW2A0A096LPI5 108 aaPredicted RBP11.19□□□□□ -0.62
HLA-A-204ENST00000396634 C16orf90A8MZG2 172 aa11.19□□□□□ -0.62
HLA-A-204ENST00000396634 DPH3Q96FX2 82 aa11.19□□□□□ -0.62
HLA-A-204ENST00000396634 SPAG11BQ08648 103 aa11.18□□□□□ -0.62
HLA-A-204ENST00000396634 C14orf177Q52M58 125 aa11.18□□□□□ -0.62
HLA-A-204ENST00000396634 LRP1BQ9NZR2 4599 aa11.17□□□□□ -0.62
HLA-A-204ENST00000396634 TOMM7Q9P0U1 55 aa11.17□□□□□ -0.62
HLA-A-204ENST00000396634 ZNF561-AS1K7EIQ3 104 aa11.17□□□□□ -0.62
HLA-A-204ENST00000396634 DNAL4O96015 105 aa11.17□□□□□ -0.62
HLA-A-204ENST00000396634 hADV29S1A0JD25 119 aa11.16□□□□□ -0.62
HLA-A-204ENST00000396634 SMIM1B2RUZ4 78 aa11.16□□□□□ -0.62
HLA-A-204ENST00000396634 TRAV13-2A0A0B4J235 113 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms