RNA–Protein interactions for RNA: ENST00000396603.6

CLTA-203, Transcript of clathrin light chain A, humanhuman

TSL 1 (best) BASIC

Gene CLTA, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-203ENST00000396603 LINC00587B1AMM8 73 aa9.9□□□□□ -0.82
CLTA-203ENST00000396603 H0Y9J4 135 aa9.9□□□□□ -0.82
CLTA-203ENST00000396603 HERV-K104P63124 156 aa9.9□□□□□ -0.82
CLTA-203ENST00000396603 LINC01545Q5VT33 79 aa9.9□□□□□ -0.82
CLTA-203ENST00000396603 PMCHL2Q9BQD1 86 aa9.9□□□□□ -0.82
CLTA-203ENST00000396603 LEPROTO15243 131 aa9.89□□□□□ -0.83
CLTA-203ENST00000396603 C3orf79P0CE67 100 aa9.89□□□□□ -0.83
CLTA-203ENST00000396603 ERG28Q9UKR5 140 aa9.89□□□□□ -0.83
CLTA-203ENST00000396603 MYMXA0A1B0GTQ4 84 aa9.88□□□□□ -0.83
CLTA-203ENST00000396603 ZNF625Q96I27 306 aaPredicted RBP9.88□□□□□ -0.83
CLTA-203ENST00000396603 LPAP08519 4548 aa9.87□□□□□ -0.83
CLTA-203ENST00000396603 LGALS3P17931 250 aaKnown RBP9.87□□□□□ -0.83
CLTA-203ENST00000396603 NMUP48645 174 aa9.87□□□□□ -0.83
CLTA-203ENST00000396603 HIST3H2BBQ8N257 126 aa9.87□□□□□ -0.83
CLTA-203ENST00000396603 NDUFA12Q9UI09 145 aa9.87□□□□□ -0.83
CLTA-203ENST00000396603 PFN2P35080 140 aa9.86□□□□□ -0.83
CLTA-203ENST00000396603 J3QQQ9 107 aa9.85□□□□□ -0.83
CLTA-203ENST00000396603 PRR26Q8N8Z3 221 aa9.85□□□□□ -0.83
CLTA-203ENST00000396603 XAGE1AQ9HD64 81 aa9.85□□□□□ -0.83
CLTA-203ENST00000396603 FAM168BA1KXE4 195 aa9.84□□□□□ -0.83
CLTA-203ENST00000396603 E9PLD3 99 aa9.84□□□□□ -0.83
CLTA-203ENST00000396603 RPL13AP40429 203 aaKnown RBP9.84□□□□□ -0.83
CLTA-203ENST00000396603 MEIG1Q5JSS6 88 aa9.84□□□□□ -0.83
CLTA-203ENST00000396603 C9orf129Q5T035 196 aaKnown RBP9.84□□□□□ -0.83
CLTA-203ENST00000396603 FAM19A5Q7Z5A7 132 aaPredicted RBP9.84□□□□□ -0.83
CLTA-203ENST00000396603 HIST1H2BLQ99880 126 aa9.84□□□□□ -0.83
CLTA-203ENST00000396603 M0QXV9 152 aa9.83□□□□□ -0.84
CLTA-203ENST00000396603 LINC00158P58513 81 aa9.83□□□□□ -0.84
CLTA-203ENST00000396603 KRTAP1-4P0C5Y4 121 aa9.82□□□□□ -0.84
CLTA-203ENST00000396603 UBE2BP63146 152 aa9.82□□□□□ -0.84
CLTA-203ENST00000396603 LBHQ53QV2 105 aaPredicted RBP9.82□□□□□ -0.84
CLTA-203ENST00000396603 KRTAP11-1Q8IUC1 163 aa9.82□□□□□ -0.84
CLTA-203ENST00000396603 SNRPEP62304 92 aaKnown RBP9.81□□□□□ -0.84
CLTA-203ENST00000396603 KRTAP7-1Q8IUC3 87 aa9.81□□□□□ -0.84
CLTA-203ENST00000396603 RPL24P83731 157 aaKnown RBP9.8□□□□□ -0.84
CLTA-203ENST00000396603 SND1-IT1Q9HBX3 110 aa9.8□□□□□ -0.84
CLTA-203ENST00000396603 TP73-AS1Q9UF72 201 aa9.8□□□□□ -0.84
CLTA-203ENST00000396603 C5orf52A6NGY3 159 aa9.79□□□□□ -0.84
CLTA-203ENST00000396603 TSPEAR-AS2P59090 65 aa9.79□□□□□ -0.84
CLTA-203ENST00000396603 NKAPP1Q8N9T2 125 aa9.79□□□□□ -0.84
CLTA-203ENST00000396603 SMIM13P0DJ93 91 aa9.77□□□□□ -0.85
CLTA-203ENST00000396603 MRPL55Q7Z7F7 128 aaKnown RBP9.77□□□□□ -0.85
CLTA-203ENST00000396603 C22orf24Q9Y442 160 aa9.77□□□□□ -0.85
CLTA-203ENST00000396603 IGLV5-37A0A075B6J1 123 aa9.76□□□□□ -0.85
CLTA-203ENST00000396603 HSBP1L1C9JCN9 74 aa9.76□□□□□ -0.85
CLTA-203ENST00000396603 ZNF861PO60384 105 aa9.76□□□□□ -0.85
CLTA-203ENST00000396603 A0A0U1RRA0 63 aa9.75□□□□□ -0.85
CLTA-203ENST00000396603 MIR7-3HGQ8N6C7 128 aa9.75□□□□□ -0.85
CLTA-203ENST00000396603 MIEN1Q9BRT3 115 aa9.74□□□□□ -0.85
CLTA-203ENST00000396603 ZNF815PA8K554 130 aa9.73□□□□□ -0.85
CLTA-203ENST00000396603 ATOH7Q8N100 152 aa9.73□□□□□ -0.85
CLTA-203ENST00000396603 A0A0J9YXY3 114 aa9.71□□□□□ -0.86
CLTA-203ENST00000396603 TIMM17BO60830 172 aa9.71□□□□□ -0.86
CLTA-203ENST00000396603 SCGB1D1O95968 90 aa9.71□□□□□ -0.86
CLTA-203ENST00000396603 VPREB1P12018 145 aa9.71□□□□□ -0.86
CLTA-203ENST00000396603 BOD1L2Q8IYS8 172 aa9.71□□□□□ -0.86
CLTA-203ENST00000396603 MUC2Q02817 5179 aa9.7□□□□□ -0.86
CLTA-203ENST00000396603 IGKV2D-26A0A0A0MRZ7 120 aa9.69□□□□□ -0.86
CLTA-203ENST00000396603 PRR4Q16378 134 aa9.69□□□□□ -0.86
CLTA-203ENST00000396603 SCGB1D4Q6XE38 83 aa9.69□□□□□ -0.86
CLTA-203ENST00000396603 LINC00167Q96N53 147 aa9.69□□□□□ -0.86
CLTA-203ENST00000396603 A0A0U1RQV1 116 aa9.68□□□□□ -0.86
CLTA-203ENST00000396603 M0R378 163 aa9.68□□□□□ -0.86
CLTA-203ENST00000396603 RPL28P46779 137 aaKnown RBP9.68□□□□□ -0.86
CLTA-203ENST00000396603 ANKRD39Q53RE8 183 aa9.68□□□□□ -0.86
CLTA-203ENST00000396603 COPS9Q8WXC6 57 aa9.68□□□□□ -0.86
CLTA-203ENST00000396603 LOC107984156A0A0G2JMH3 177 aa9.67□□□□□ -0.86
CLTA-203ENST00000396603 GAGE10A6NGK3 116 aa9.67□□□□□ -0.86
CLTA-203ENST00000396603 ARL17AQ8IVW1 177 aa9.67□□□□□ -0.86
CLTA-203ENST00000396603 TMEM238C9JI98 176 aa9.66□□□□□ -0.86
CLTA-203ENST00000396603 BCE1O60756 84 aa9.66□□□□□ -0.86
CLTA-203ENST00000396603 S100A12P80511 92 aa9.66□□□□□ -0.86
CLTA-203ENST00000396603 DAND5Q8N907 189 aa9.66□□□□□ -0.86
CLTA-203ENST00000396603 TMA7Q9Y2S6 64 aaKnown RBP9.66□□□□□ -0.86
CLTA-203ENST00000396603 RPL37AP8A6NKH3 93 aa9.65□□□□□ -0.86
CLTA-203ENST00000396603 NDUFC2O95298 119 aa9.64□□□□□ -0.87
CLTA-203ENST00000396603 IGKV2-28A0A075B6P5 120 aa9.63□□□□□ -0.87
CLTA-203ENST00000396603 TRBV10-2A0A0K0K1G8 114 aa9.63□□□□□ -0.87
CLTA-203ENST00000396603 IGKV2D-28P01615 120 aa9.63□□□□□ -0.87
CLTA-203ENST00000396603 CRYGAP11844 174 aa9.63□□□□□ -0.87
CLTA-203ENST00000396603 Q6ZVH6 145 aa9.63□□□□□ -0.87
CLTA-203ENST00000396603 TTTY13Q9BZ97 58 aa9.63□□□□□ -0.87
CLTA-203ENST00000396603 SPANXB1Q9NS25 103 aaPredicted RBP9.63□□□□□ -0.87
CLTA-203ENST00000396603 ADAMTSL4-AS1Q5T5F5 129 aa9.62□□□□□ -0.87
CLTA-203ENST00000396603 LITAFQ99732 161 aa9.62□□□□□ -0.87
CLTA-203ENST00000396603 CBY1Q9Y3M2 126 aa9.62□□□□□ -0.87
CLTA-203ENST00000396603 NCR3O14931 201 aa9.61□□□□□ -0.87
CLTA-203ENST00000396603 CTAG1AP78358 180 aa9.61□□□□□ -0.87
CLTA-203ENST00000396603 PCP2Q8IVA1 136 aa9.61□□□□□ -0.87
CLTA-203ENST00000396603 Q8NDZ9 215 aa9.61□□□□□ -0.87
CLTA-203ENST00000396603 LINC00308Q8TCZ7 52 aa9.61□□□□□ -0.87
CLTA-203ENST00000396603 SPANXDQ9BXN6 97 aa9.61□□□□□ -0.87
CLTA-203ENST00000396603 SPANXCQ9NY87 97 aa9.61□□□□□ -0.87
CLTA-203ENST00000396603 A0A087X002 238 aa9.6□□□□□ -0.87
CLTA-203ENST00000396603 IFITM1P13164 125 aa9.6□□□□□ -0.87
CLTA-203ENST00000396603 JOSD1Q15040 202 aaPredicted RBP9.6□□□□□ -0.87
CLTA-203ENST00000396603 TYMSOSQ8TAI1 123 aa9.6□□□□□ -0.87
CLTA-203ENST00000396603 PRYO14603 147 aa9.59□□□□□ -0.87
CLTA-203ENST00000396603 UBE2AP49459 152 aa9.59□□□□□ -0.87
CLTA-203ENST00000396603 PPDPFQ9H3Y8 114 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms