RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 FAT2Q9NYQ8 4349 aa8.27□□□□□ -1.08
TRIM39-204ENST00000396548 IGKV2-28A0A075B6P5 120 aa8.27□□□□□ -1.09
TRIM39-204ENST00000396548 M0R2N4 97 aa8.27□□□□□ -1.09
TRIM39-204ENST00000396548 IGKV2D-28P01615 120 aa8.27□□□□□ -1.09
TRIM39-204ENST00000396548 RAB37Q96AX2 223 aa8.27□□□□□ -1.09
TRIM39-204ENST00000396548 GAGE10A6NGK3 116 aa8.27□□□□□ -1.09
TRIM39-204ENST00000396548 TLX1NBP0CAT3 122 aa8.26□□□□□ -1.09
TRIM39-204ENST00000396548 PRO1854Q9UHT4 67 aa8.26□□□□□ -1.09
TRIM39-204ENST00000396548 CNBPP62633 177 aaKnown RBP8.26□□□□□ -1.09
TRIM39-204ENST00000396548 TSPAN13O95857 204 aa8.25□□□□□ -1.09
TRIM39-204ENST00000396548 NDUFC2-KCTD14E9PQ53 114 aa8.25□□□□□ -1.09
TRIM39-204ENST00000396548 LY6G6CO95867 125 aa8.25□□□□□ -1.09
TRIM39-204ENST00000396548 CARD19Q96LW7 228 aa8.25□□□□□ -1.09
TRIM39-204ENST00000396548 Q6ZRP5 223 aa8.24□□□□□ -1.09
TRIM39-204ENST00000396548 PSCAO43653 123 aa8.24□□□□□ -1.09
TRIM39-204ENST00000396548 NDUFC2O95298 119 aa8.24□□□□□ -1.09
TRIM39-204ENST00000396548 PKD1P98161 4303 aa8.24□□□□□ -1.09
TRIM39-204ENST00000396548 PGPEP1Q9NXJ5 209 aa8.23□□□□□ -1.09
TRIM39-204ENST00000396548 LINC00337Q8N6G1 96 aa8.23□□□□□ -1.09
TRIM39-204ENST00000396548 H3BUT2 72 aa8.22□□□□□ -1.09
TRIM39-204ENST00000396548 A0A1W2PPM0 123 aa8.22□□□□□ -1.09
TRIM39-204ENST00000396548 C14orf177Q52M58 125 aa8.21□□□□□ -1.09
TRIM39-204ENST00000396548 C9orf129Q5T035 196 aaKnown RBP8.21□□□□□ -1.1
TRIM39-204ENST00000396548 RYR2Q92736 4967 aa8.21□□□□□ -1.1
TRIM39-204ENST00000396548 PRR3P79522 188 aaKnown RBP8.2□□□□□ -1.1
TRIM39-204ENST00000396548 DNAH5Q8TE73 4624 aa8.2□□□□□ -1.1
TRIM39-204ENST00000396548 Q8N814 137 aa8.2□□□□□ -1.1
TRIM39-204ENST00000396548 A0A087WTM6 91 aa8.19□□□□□ -1.1
TRIM39-204ENST00000396548 RPL13AP40429 203 aaKnown RBP8.19□□□□□ -1.1
TRIM39-204ENST00000396548 GTF2H5Q6ZYL4 71 aa8.19□□□□□ -1.1
TRIM39-204ENST00000396548 XAGE1AQ9HD64 81 aa8.19□□□□□ -1.1
TRIM39-204ENST00000396548 C1orf134Q5TEV5 83 aa8.18□□□□□ -1.1
TRIM39-204ENST00000396548 TRAV13-2A0A0B4J235 113 aa8.18□□□□□ -1.1
TRIM39-204ENST00000396548 VPREB1P12018 145 aa8.18□□□□□ -1.1
TRIM39-204ENST00000396548 PLA2G2DQ9UNK4 145 aa8.17□□□□□ -1.1
TRIM39-204ENST00000396548 KRTAP7-1Q8IUC3 87 aa8.17□□□□□ -1.1
TRIM39-204ENST00000396548 LOC107984640A0A0U1RRK4 108 aa8.16□□□□□ -1.1
TRIM39-204ENST00000396548 TRBV10-2A0A0K0K1G8 114 aa8.16□□□□□ -1.1
TRIM39-204ENST00000396548 TRIAP1O43715 76 aa8.16□□□□□ -1.1
TRIM39-204ENST00000396548 GAGE2EQ4V326 116 aa8.16□□□□□ -1.1
TRIM39-204ENST00000396548 GAGE2DQ9UEU5 116 aa8.16□□□□□ -1.1
TRIM39-204ENST00000396548 DNAH8Q96JB1 4490 aa8.16□□□□□ -1.1
TRIM39-204ENST00000396548 C9orf163Q8N9P6 203 aa8.16□□□□□ -1.1
TRIM39-204ENST00000396548 KMT2CQ8NEZ4 4911 aaKnown RBP8.15□□□□□ -1.1
TRIM39-204ENST00000396548 RTL8CO15255 209 aa8.15□□□□□ -1.1
TRIM39-204ENST00000396548 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.15□□□□□ -1.11
TRIM39-204ENST00000396548 H7C2G1 150 aa8.15□□□□□ -1.11
TRIM39-204ENST00000396548 RPL18AQ02543 176 aaKnown RBP8.15□□□□□ -1.11
TRIM39-204ENST00000396548 K7EP34 96 aa8.14□□□□□ -1.11
TRIM39-204ENST00000396548 IGLV6-57P01721 117 aa8.14□□□□□ -1.11
TRIM39-204ENST00000396548 FABP2P12104 132 aa8.14□□□□□ -1.11
TRIM39-204ENST00000396548 SPCS1Q9Y6A9 102 aa8.14□□□□□ -1.11
TRIM39-204ENST00000396548 A0A1B0GV72 72 aa8.14□□□□□ -1.11
TRIM39-204ENST00000396548 NCR3O14931 201 aa8.14□□□□□ -1.11
TRIM39-204ENST00000396548 RPL28P46779 137 aaKnown RBP8.14□□□□□ -1.11
TRIM39-204ENST00000396548 SIGMAR1Q99720 223 aa8.14□□□□□ -1.11
TRIM39-204ENST00000396548 IGLV5-37A0A075B6J1 123 aa8.14□□□□□ -1.11
TRIM39-204ENST00000396548 SERTAD4-AS1Q5TG53 156 aa8.14□□□□□ -1.11
TRIM39-204ENST00000396548 C16orf90A8MZG2 172 aa8.13□□□□□ -1.11
TRIM39-204ENST00000396548 SMIM11BQ8TCY0 68 aa8.13□□□□□ -1.11
TRIM39-204ENST00000396548 A0A096LNI7 61 aa8.12□□□□□ -1.11
TRIM39-204ENST00000396548 SDIM1Q6ZPB5 146 aa8.12□□□□□ -1.11
TRIM39-204ENST00000396548 LCE6AA0A183 80 aa8.12□□□□□ -1.11
TRIM39-204ENST00000396548 FAM168BA1KXE4 195 aa8.12□□□□□ -1.11
TRIM39-204ENST00000396548 TNP2Q05952 138 aa8.11□□□□□ -1.11
TRIM39-204ENST00000396548 Q1RN00 199 aa8.11□□□□□ -1.11
TRIM39-204ENST00000396548 TCL1BO95988 128 aa8.11□□□□□ -1.11
TRIM39-204ENST00000396548 TMEM126AQ9H061 195 aa8.11□□□□□ -1.11
TRIM39-204ENST00000396548 GAGE2BQ13066 116 aa8.1□□□□□ -1.11
TRIM39-204ENST00000396548 M0R378 163 aa8.1□□□□□ -1.11
TRIM39-204ENST00000396548 PSMB2P49721 201 aa8.1□□□□□ -1.11
TRIM39-204ENST00000396548 EPM2AB3EWF7 344 aa8.08□□□□□ -1.12
TRIM39-204ENST00000396548 LINC01620Q4KN68 170 aa8.08□□□□□ -1.12
TRIM39-204ENST00000396548 OR13C6PQ8NH95 151 aa8.08□□□□□ -1.12
TRIM39-204ENST00000396548 TRBV10-3A0A0K0K1G6 114 aa8.08□□□□□ -1.12
TRIM39-204ENST00000396548 MTURNQ8N3F0 131 aa8.08□□□□□ -1.12
TRIM39-204ENST00000396548 TRBV20-1A0A075B6N2 111 aa8.08□□□□□ -1.12
TRIM39-204ENST00000396548 FUSP35637 526 aaKnown RBP eCLIP8.07□□□□□ -1.12
TRIM39-204ENST00000396548 A0A1W2PNN7 141 aa8.07□□□□□ -1.12
TRIM39-204ENST00000396548 PANO1I0J062 215 aa8.07□□□□□ -1.12
TRIM39-204ENST00000396548 LYRM7Q5U5X0 104 aa8.07□□□□□ -1.12
TRIM39-204ENST00000396548 H3BMG7 143 aa8.06□□□□□ -1.12
TRIM39-204ENST00000396548 C7orf33Q8WU49 177 aa8.06□□□□□ -1.12
TRIM39-204ENST00000396548 SCGB1C2P0DMR2 95 aa8.06□□□□□ -1.12
TRIM39-204ENST00000396548 S100A7L2Q5SY68 101 aa8.06□□□□□ -1.12
TRIM39-204ENST00000396548 CLEC2BQ92478 149 aa8.06□□□□□ -1.12
TRIM39-204ENST00000396548 FAM218AQ96MZ4 157 aa8.06□□□□□ -1.12
TRIM39-204ENST00000396548 PRO0461Q9UI25 63 aa8.06□□□□□ -1.12
TRIM39-204ENST00000396548 LST1O00453 97 aa8.06□□□□□ -1.12
TRIM39-204ENST00000396548 CHTF8P0CG12 524 aa8.06□□□□□ -1.12
TRIM39-204ENST00000396548 PKIGQ9Y2B9 76 aa8.06□□□□□ -1.12
TRIM39-204ENST00000396548 C22orf24Q9Y442 160 aa8.05□□□□□ -1.12
TRIM39-204ENST00000396548 COX6CP09669 75 aa8.05□□□□□ -1.12
TRIM39-204ENST00000396548 SPACA4Q8TDM5 124 aa8.04□□□□□ -1.12
TRIM39-204ENST00000396548 SCGB1A1P11684 91 aa8.04□□□□□ -1.12
TRIM39-204ENST00000396548 ETDBQ3ZM63 59 aa8.04□□□□□ -1.12
TRIM39-204ENST00000396548 KCNQ1DNQ9H478 68 aa8.04□□□□□ -1.12
TRIM39-204ENST00000396548 IGLV1-50A0A075B6I6 118 aa8.04□□□□□ -1.12
TRIM39-204ENST00000396548 TRAV23DV6A0A075B6W5 121 aa8.04□□□□□ -1.12
TRIM39-204ENST00000396548 IGKV2-24A0A0C4DH68 120 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms