RNA–Protein interactions for RNA: ENST00000396342.6

DDR1-229, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 675 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-229ENST00000396342 TMEM238C9JI98 176 aa9.59□□□□□ -0.87
DDR1-229ENST00000396342 KRTAP13-1Q8IUC0 172 aa9.59□□□□□ -0.87
DDR1-229ENST00000396342 C18orf32Q8TCD1 76 aa9.59□□□□□ -0.87
DDR1-229ENST00000396342 SPAG11AQ6PDA7 123 aa9.58□□□□□ -0.88
DDR1-229ENST00000396342 C11orf86A6NJI1 115 aa9.57□□□□□ -0.88
DDR1-229ENST00000396342 M0R378 163 aa9.57□□□□□ -0.88
DDR1-229ENST00000396342 IFITM2Q01629 132 aa9.57□□□□□ -0.88
DDR1-229ENST00000396342 PMCHL1Q16048 86 aa9.57□□□□□ -0.88
DDR1-229ENST00000396342 MEIG1Q5JSS6 88 aa9.57□□□□□ -0.88
DDR1-229ENST00000396342 IGLV7-46A0A075B6I9 117 aa9.56□□□□□ -0.88
DDR1-229ENST00000396342 SNAPINO95295 136 aa9.56□□□□□ -0.88
DDR1-229ENST00000396342 KRTAP13-2Q52LG2 175 aa9.56□□□□□ -0.88
DDR1-229ENST00000396342 MAP1LC3CQ9BXW4 147 aa9.56□□□□□ -0.88
DDR1-229ENST00000396342 RETNLBQ9BQ08 111 aa9.55□□□□□ -0.88
DDR1-229ENST00000396342 A0A0U1RRA0 63 aa9.54□□□□□ -0.88
DDR1-229ENST00000396342 HERV-K104P63124 156 aa9.54□□□□□ -0.88
DDR1-229ENST00000396342 C10orf91Q5T1B1 145 aa9.54□□□□□ -0.88
DDR1-229ENST00000396342 SVBPQ8N300 66 aa9.54□□□□□ -0.88
DDR1-229ENST00000396342 PLEKHB2Q96CS7 222 aa9.54□□□□□ -0.88
DDR1-229ENST00000396342 A0A096LNJ9 63 aa9.53□□□□□ -0.88
DDR1-229ENST00000396342 APOC3P02656 99 aa9.53□□□□□ -0.88
DDR1-229ENST00000396342 BOD1L2Q8IYS8 172 aa9.53□□□□□ -0.88
DDR1-229ENST00000396342 CHCHD1Q96BP2 118 aaKnown RBP9.53□□□□□ -0.88
DDR1-229ENST00000396342 LPAP08519 4548 aa9.53□□□□□ -0.88
DDR1-229ENST00000396342 TRAV12-1A0A0B4J245 112 aa9.52□□□□□ -0.89
DDR1-229ENST00000396342 ETDCA0A1B0GVM5 59 aa9.52□□□□□ -0.89
DDR1-229ENST00000396342 IFI27L1Q96BM0 104 aa9.52□□□□□ -0.89
DDR1-229ENST00000396342 PRYO14603 147 aa9.51□□□□□ -0.89
DDR1-229ENST00000396342 TPRXLQ17RH7 258 aa9.51□□□□□ -0.89
DDR1-229ENST00000396342 LINC00337Q8N6G1 96 aa9.51□□□□□ -0.89
DDR1-229ENST00000396342 MYMXA0A1B0GTQ4 84 aa9.5□□□□□ -0.89
DDR1-229ENST00000396342 TMEM223A0PJW6 202 aa9.49□□□□□ -0.89
DDR1-229ENST00000396342 HSBP1O75506 76 aa9.49□□□□□ -0.89
DDR1-229ENST00000396342 URB1-AS1Q96HZ7 61 aa9.49□□□□□ -0.89
DDR1-229ENST00000396342 SMIM13P0DJ93 91 aa9.48□□□□□ -0.89
DDR1-229ENST00000396342 SPRR4Q96PI1 79 aa9.48□□□□□ -0.89
DDR1-229ENST00000396342 NDUFA12Q9UI09 145 aa9.48□□□□□ -0.89
DDR1-229ENST00000396342 C3orf22Q8N5N4 141 aa9.47□□□□□ -0.89
DDR1-229ENST00000396342 MIR7-3HGQ8N6C7 128 aa9.47□□□□□ -0.89
DDR1-229ENST00000396342 MIEN1Q9BRT3 115 aa9.47□□□□□ -0.89
DDR1-229ENST00000396342 PPDPFQ9H3Y8 114 aa9.47□□□□□ -0.89
DDR1-229ENST00000396342 NCR3O14931 201 aa9.46□□□□□ -0.9
DDR1-229ENST00000396342 FP248Q71RG6 208 aaPredicted RBP9.46□□□□□ -0.9
DDR1-229ENST00000396342 H0Y8G0 127 aa9.45□□□□□ -0.9
DDR1-229ENST00000396342 HERVK_113P61574 105 aa9.44□□□□□ -0.9
DDR1-229ENST00000396342 SPINK1P00995 79 aa9.43□□□□□ -0.9
DDR1-229ENST00000396342 SMCR5Q8TEV8 140 aa9.43□□□□□ -0.9
DDR1-229ENST00000396342 KCNQ1DNQ9H478 68 aa9.43□□□□□ -0.9
DDR1-229ENST00000396342 Q8NBF4 154 aa9.42□□□□□ -0.9
DDR1-229ENST00000396342 Q8NDZ9 215 aa9.42□□□□□ -0.9
DDR1-229ENST00000396342 PLNP26678 52 aa9.41□□□□□ -0.9
DDR1-229ENST00000396342 S100A7L2Q5SY68 101 aa9.41□□□□□ -0.9
DDR1-229ENST00000396342 FAM19A2Q8N3H0 131 aa9.41□□□□□ -0.9
DDR1-229ENST00000396342 CBY1Q9Y3M2 126 aa9.41□□□□□ -0.9
DDR1-229ENST00000396342 TRBV10-3A0A0K0K1G6 114 aa9.4□□□□□ -0.9
DDR1-229ENST00000396342 LEPROTL1O95214 131 aa9.4□□□□□ -0.9
DDR1-229ENST00000396342 JOSD1Q15040 202 aaPredicted RBP9.4□□□□□ -0.9
DDR1-229ENST00000396342 GAGE2AQ6NT46 116 aa9.4□□□□□ -0.9
DDR1-229ENST00000396342 LGALS3P17931 250 aaKnown RBP9.39□□□□□ -0.91
DDR1-229ENST00000396342 DDTP30046 118 aa9.39□□□□□ -0.91
DDR1-229ENST00000396342 DAND5Q8N907 189 aa9.39□□□□□ -0.91
DDR1-229ENST00000396342 HSPB8Q9UJY1 196 aa9.39□□□□□ -0.91
DDR1-229ENST00000396342 NMUP48645 174 aa9.38□□□□□ -0.91
DDR1-229ENST00000396342 HINT1P49773 126 aaPredicted RBP9.38□□□□□ -0.91
DDR1-229ENST00000396342 TRBV10-2A0A0K0K1G8 114 aa9.37□□□□□ -0.91
DDR1-229ENST00000396342 LEPROTO15243 131 aa9.37□□□□□ -0.91
DDR1-229ENST00000396342 SPRR1AP35321 89 aa9.37□□□□□ -0.91
DDR1-229ENST00000396342 SPANXB1Q9NS25 103 aaPredicted RBP9.37□□□□□ -0.91
DDR1-229ENST00000396342 IGLV9-49A0A0B4J1Y8 123 aa9.36□□□□□ -0.91
DDR1-229ENST00000396342 SSBP3-AS1Q7Z2R9 100 aa9.36□□□□□ -0.91
DDR1-229ENST00000396342 DPM2O94777 84 aa9.35□□□□□ -0.91
DDR1-229ENST00000396342 MUC2Q02817 5179 aa9.34□□□□□ -0.91
DDR1-229ENST00000396342 J3QQQ9 107 aa9.34□□□□□ -0.91
DDR1-229ENST00000396342 MOBPQ13875 183 aa9.34□□□□□ -0.91
DDR1-229ENST00000396342 B5MCH6 92 aa9.33□□□□□ -0.92
DDR1-229ENST00000396342 SEC61BP60468 96 aaKnown RBP9.33□□□□□ -0.92
DDR1-229ENST00000396342 LINC00483Q53H64 154 aa9.33□□□□□ -0.92
DDR1-229ENST00000396342 SLC25A20O43772 301 aa9.32□□□□□ -0.92
DDR1-229ENST00000396342 C9orf153Q5TBE3 101 aa9.32□□□□□ -0.92
DDR1-229ENST00000396342 IGKCP01834 107 aa9.31□□□□□ -0.92
DDR1-229ENST00000396342 FABP4P15090 132 aa9.31□□□□□ -0.92
DDR1-229ENST00000396342 RPS29P62273 56 aaKnown RBP9.31□□□□□ -0.92
DDR1-229ENST00000396342 Q6ZRX8 168 aa9.31□□□□□ -0.92
DDR1-229ENST00000396342 TRAV23DV6A0A075B6W5 121 aa9.3□□□□□ -0.92
DDR1-229ENST00000396342 LOC107984156A0A0G2JMH3 177 aa9.3□□□□□ -0.92
DDR1-229ENST00000396342 KRTAP4-16G5E9R7 235 aaPredicted RBP9.3□□□□□ -0.92
DDR1-229ENST00000396342 NDUFC2O95298 119 aa9.3□□□□□ -0.92
DDR1-229ENST00000396342 TRGC2P03986 189 aa9.3□□□□□ -0.92
DDR1-229ENST00000396342 ARL17AQ8IVW1 177 aa9.3□□□□□ -0.92
DDR1-229ENST00000396342 SERF1AO75920 110 aa9.29□□□□□ -0.92
DDR1-229ENST00000396342 SLC25A34Q6PIV7 304 aa9.29□□□□□ -0.92
DDR1-229ENST00000396342 LINC01547P58512 204 aaPredicted RBP9.28□□□□□ -0.92
DDR1-229ENST00000396342 YPEL4Q96NS1 127 aa9.28□□□□□ -0.92
DDR1-229ENST00000396342 KRTAP13-3Q3SY46 172 aa9.27□□□□□ -0.93
DDR1-229ENST00000396342 ZNF73O43830 326 aaPredicted RBP9.26□□□□□ -0.93
DDR1-229ENST00000396342 TSPEAR-AS2P59090 65 aa9.26□□□□□ -0.93
DDR1-229ENST00000396342 KRTAP9-2Q9BYQ4 174 aa9.26□□□□□ -0.93
DDR1-229ENST00000396342 C5orf52A6NGY3 159 aa9.25□□□□□ -0.93
DDR1-229ENST00000396342 IGLV6-57P01721 117 aa9.25□□□□□ -0.93
DDR1-229ENST00000396342 ASB16-AS1Q495Z4 193 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms