RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 RPL24P83731 157 aaKnown RBP8.26□□□□□ -1.09
CXCL12-205ENST00000395794 IFI27L1Q96BM0 104 aa8.26□□□□□ -1.09
CXCL12-205ENST00000395794 ZNF625Q96I27 306 aaPredicted RBP8.26□□□□□ -1.09
CXCL12-205ENST00000395794 YPEL4Q96NS1 127 aa8.26□□□□□ -1.09
CXCL12-205ENST00000395794 HSBP1O75506 76 aa8.25□□□□□ -1.09
CXCL12-205ENST00000395794 SND1-IT1Q9HBX3 110 aa8.25□□□□□ -1.09
CXCL12-205ENST00000395794 TRAV12-1A0A0B4J245 112 aa8.24□□□□□ -1.09
CXCL12-205ENST00000395794 UBE2AP49459 152 aa8.24□□□□□ -1.09
CXCL12-205ENST00000395794 CBLN2Q8IUK8 224 aa8.24□□□□□ -1.09
CXCL12-205ENST00000395794 TMA7Q9Y2S6 64 aaKnown RBP8.23□□□□□ -1.09
CXCL12-205ENST00000395794 IGKV2-28A0A075B6P5 120 aa8.22□□□□□ -1.09
CXCL12-205ENST00000395794 ATP6V1G1O75348 118 aa8.22□□□□□ -1.09
CXCL12-205ENST00000395794 IGKV2D-28P01615 120 aa8.22□□□□□ -1.09
CXCL12-205ENST00000395794 LINC00158P58513 81 aa8.22□□□□□ -1.09
CXCL12-205ENST00000395794 TMEM223A0PJW6 202 aa8.21□□□□□ -1.1
CXCL12-205ENST00000395794 SCO1O75880 301 aa8.2□□□□□ -1.1
CXCL12-205ENST00000395794 VPREB1P12018 145 aa8.2□□□□□ -1.1
CXCL12-205ENST00000395794 FAM19A2Q8N3H0 131 aa8.2□□□□□ -1.1
CXCL12-205ENST00000395794 LRP2P98164 4655 aa8.2□□□□□ -1.1
CXCL12-205ENST00000395794 H0Y8G0 127 aa8.19□□□□□ -1.1
CXCL12-205ENST00000395794 TRGC2P03986 189 aa8.19□□□□□ -1.1
CXCL12-205ENST00000395794 CRYGAP11844 174 aa8.19□□□□□ -1.1
CXCL12-205ENST00000395794 A0A0U1RRA0 63 aa8.18□□□□□ -1.1
CXCL12-205ENST00000395794 LEPROTL1O95214 131 aa8.18□□□□□ -1.1
CXCL12-205ENST00000395794 LCE1DQ5T752 114 aa8.18□□□□□ -1.1
CXCL12-205ENST00000395794 KRTAP4-7Q9BYR0 210 aa8.18□□□□□ -1.1
CXCL12-205ENST00000395794 LINC00587B1AMM8 73 aa8.17□□□□□ -1.1
CXCL12-205ENST00000395794 HERV-K104P63124 156 aa8.17□□□□□ -1.1
CXCL12-205ENST00000395794 MEIG1Q5JSS6 88 aa8.17□□□□□ -1.1
CXCL12-205ENST00000395794 FAM19A1Q7Z5A9 133 aa8.17□□□□□ -1.1
CXCL12-205ENST00000395794 TYMSOSQ8TAI1 123 aa8.17□□□□□ -1.1
CXCL12-205ENST00000395794 TMEM126AQ9H061 195 aa8.17□□□□□ -1.1
CXCL12-205ENST00000395794 HSPB8Q9UJY1 196 aa8.16□□□□□ -1.1
CXCL12-205ENST00000395794 MYMXA0A1B0GTQ4 84 aa8.15□□□□□ -1.1
CXCL12-205ENST00000395794 TMEM238C9JI98 176 aa8.15□□□□□ -1.1
CXCL12-205ENST00000395794 SERF1AO75920 110 aa8.15□□□□□ -1.1
CXCL12-205ENST00000395794 SMIM13P0DJ93 91 aa8.15□□□□□ -1.1
CXCL12-205ENST00000395794 KRTAP13-1Q8IUC0 172 aa8.15□□□□□ -1.1
CXCL12-205ENST00000395794 SLC7A5P1Q8MH63 180 aa8.15□□□□□ -1.1
CXCL12-205ENST00000395794 MAP1LC3CQ9BXW4 147 aa8.15□□□□□ -1.1
CXCL12-205ENST00000395794 RNF213Q63HN8 5207 aa8.14□□□□□ -1.11
CXCL12-205ENST00000395794 M0R378 163 aa8.14□□□□□ -1.11
CXCL12-205ENST00000395794 PLNP26678 52 aa8.14□□□□□ -1.11
CXCL12-205ENST00000395794 PRLHP81277 87 aa8.14□□□□□ -1.11
CXCL12-205ENST00000395794 PRR4Q16378 134 aa8.14□□□□□ -1.11
CXCL12-205ENST00000395794 NDUFA12Q9UI09 145 aa8.14□□□□□ -1.11
CXCL12-205ENST00000395794 A0A087X002 238 aa8.13□□□□□ -1.11
CXCL12-205ENST00000395794 TSPAN13O95857 204 aa8.13□□□□□ -1.11
CXCL12-205ENST00000395794 FAM229BQ4G0N7 80 aa8.13□□□□□ -1.11
CXCL12-205ENST00000395794 BOD1L2Q8IYS8 172 aa8.13□□□□□ -1.11
CXCL12-205ENST00000395794 FABP4P15090 132 aa8.12□□□□□ -1.11
CXCL12-205ENST00000395794 HERVK_113P61574 105 aa8.12□□□□□ -1.11
CXCL12-205ENST00000395794 MIR7-3HGQ8N6C7 128 aa8.12□□□□□ -1.11
CXCL12-205ENST00000395794 Q8NDZ9 215 aa8.12□□□□□ -1.11
CXCL12-205ENST00000395794 ANAPC11Q9NYG5 84 aa8.12□□□□□ -1.11
CXCL12-205ENST00000395794 IGKV2D-26A0A0A0MRZ7 120 aa8.11□□□□□ -1.11
CXCL12-205ENST00000395794 S100A12P80511 92 aa8.11□□□□□ -1.11
CXCL12-205ENST00000395794 PLEKHB2Q96CS7 222 aa8.11□□□□□ -1.11
CXCL12-205ENST00000395794 COLCA2A8K830 154 aa8.1□□□□□ -1.11
CXCL12-205ENST00000395794 LEPROTO15243 131 aa8.1□□□□□ -1.11
CXCL12-205ENST00000395794 DPM2O94777 84 aa8.1□□□□□ -1.11
CXCL12-205ENST00000395794 NCR3O14931 201 aa8.09□□□□□ -1.11
CXCL12-205ENST00000395794 LINC00310P59036 64 aa8.09□□□□□ -1.11
CXCL12-205ENST00000395794 HIGD2AQ9BW72 106 aa8.09□□□□□ -1.11
CXCL12-205ENST00000395794 PRYO14603 147 aa8.08□□□□□ -1.12
CXCL12-205ENST00000395794 IGKCP01834 107 aa8.08□□□□□ -1.12
CXCL12-205ENST00000395794 J3QQQ9 107 aa8.07□□□□□ -1.12
CXCL12-205ENST00000395794 LGALS3P17931 250 aaKnown RBP8.07□□□□□ -1.12
CXCL12-205ENST00000395794 NMUP48645 174 aa8.07□□□□□ -1.12
CXCL12-205ENST00000395794 KRTAP13-2Q52LG2 175 aa8.07□□□□□ -1.12
CXCL12-205ENST00000395794 PMCHL2Q9BQD1 86 aa8.07□□□□□ -1.12
CXCL12-205ENST00000395794 MIEN1Q9BRT3 115 aa8.07□□□□□ -1.12
CXCL12-205ENST00000395794 ZNF706Q9Y5V0 76 aaPredicted RBP8.07□□□□□ -1.12
CXCL12-205ENST00000395794 TSPEAR-AS2P59090 65 aa8.06□□□□□ -1.12
CXCL12-205ENST00000395794 LINC00304Q8N9R0 145 aa8.06□□□□□ -1.12
CXCL12-205ENST00000395794 ETDCA0A1B0GVM5 59 aa8.05□□□□□ -1.12
CXCL12-205ENST00000395794 KCNQ1DNQ9H478 68 aa8.05□□□□□ -1.12
CXCL12-205ENST00000395794 LINC00337Q8N6G1 96 aa8.04□□□□□ -1.12
CXCL12-205ENST00000395794 DAND5Q8N907 189 aa8.04□□□□□ -1.12
CXCL12-205ENST00000395794 LPAP08519 4548 aa8.02□□□□□ -1.12
CXCL12-205ENST00000395794 TRBV10-3A0A0K0K1G6 114 aa8.02□□□□□ -1.13
CXCL12-205ENST00000395794 SPRR4Q96PI1 79 aa8.02□□□□□ -1.13
CXCL12-205ENST00000395794 LOC107984156A0A0G2JMH3 177 aa8.01□□□□□ -1.13
CXCL12-205ENST00000395794 TRBV10-2A0A0K0K1G8 114 aa8.01□□□□□ -1.13
CXCL12-205ENST00000395794 DDTP30046 118 aa8.01□□□□□ -1.13
CXCL12-205ENST00000395794 SPRR1AP35321 89 aa8.01□□□□□ -1.13
CXCL12-205ENST00000395794 S100A7L2Q5SY68 101 aa8.01□□□□□ -1.13
CXCL12-205ENST00000395794 ARL17AQ8IVW1 177 aa8.01□□□□□ -1.13
CXCL12-205ENST00000395794 SPANXB1Q9NS25 103 aaPredicted RBP8.01□□□□□ -1.13
CXCL12-205ENST00000395794 CTAG1AP78358 180 aa8□□□□□ -1.13
CXCL12-205ENST00000395794 SMCR5Q8TEV8 140 aa8□□□□□ -1.13
CXCL12-205ENST00000395794 E9PLD3 99 aa7.99□□□□□ -1.13
CXCL12-205ENST00000395794 SYS1-DBNDD2H3BUS1 97 aa7.99□□□□□ -1.13
CXCL12-205ENST00000395794 HIST1H2BKO60814 126 aa7.99□□□□□ -1.13
CXCL12-205ENST00000395794 HIST1H2BJP06899 126 aa7.99□□□□□ -1.13
CXCL12-205ENST00000395794 HIST1H2BOP23527 126 aa7.99□□□□□ -1.13
CXCL12-205ENST00000395794 HIST1H2BBP33778 126 aa7.99□□□□□ -1.13
CXCL12-205ENST00000395794 HIST1H2BDP58876 126 aa7.99□□□□□ -1.13
CXCL12-205ENST00000395794 HIST1H2BCP62807 126 aa7.99□□□□□ -1.13
CXCL12-205ENST00000395794 HIST2H2BEQ16778 126 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 148 ms