RNA–Protein interactions for RNA: ENST00000395548.6

AP3S1-202, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 1 (best)

Gene AP3S1, Length 1,180 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-202ENST00000395548 TRAV12-3A0A0B4J271 114 aa3.01□□□□□ -1.93
AP3S1-202ENST00000395548 C20orf202A1L168 122 aa3.01□□□□□ -1.93
AP3S1-202ENST00000395548 M0R129 80 aa3.01□□□□□ -1.93
AP3S1-202ENST00000395548 SFTA3P0C7M3 94 aa3.01□□□□□ -1.93
AP3S1-202ENST00000395548 SLC25A4P12235 298 aa3.01□□□□□ -1.93
AP3S1-202ENST00000395548 C2orf83Q53S99 150 aa3.01□□□□□ -1.93
AP3S1-202ENST00000395548 C1orf64Q8NEQ6 169 aa3.01□□□□□ -1.93
AP3S1-202ENST00000395548 ARHGAP5-AS1Q96IT6 56 aa3.01□□□□□ -1.93
AP3S1-202ENST00000395548 RETNLBQ9BQ08 111 aa3.01□□□□□ -1.93
AP3S1-202ENST00000395548 MRPL36Q9P0J6 103 aaKnown RBP3.01□□□□□ -1.93
AP3S1-202ENST00000395548 IGKV2-24A0A0C4DH68 120 aa3□□□□□ -1.93
AP3S1-202ENST00000395548 MUC21A0A0G2JKD1 596 aa3□□□□□ -1.93
AP3S1-202ENST00000395548 A0A0G2JND7 137 aa3□□□□□ -1.93
AP3S1-202ENST00000395548 A0A1B0GVG6 124 aa3□□□□□ -1.93
AP3S1-202ENST00000395548 GNGT2O14610 69 aa3□□□□□ -1.93
AP3S1-202ENST00000395548 TCRAP04437 139 aa3□□□□□ -1.93
AP3S1-202ENST00000395548 QRFPP83859 136 aa3□□□□□ -1.93
AP3S1-202ENST00000395548 C7orf65Q6ZTY9 151 aa3□□□□□ -1.93
AP3S1-202ENST00000395548 CRYM-AS1A6NIL9 109 aa2.99□□□□□ -1.93
AP3S1-202ENST00000395548 J3QRE1 110 aa2.99□□□□□ -1.93
AP3S1-202ENST00000395548 CRPP02741 224 aa2.99□□□□□ -1.93
AP3S1-202ENST00000395548 COX6A2Q02221 97 aa2.99□□□□□ -1.93
AP3S1-202ENST00000395548 SS18Q15532 418 aa2.99□□□□□ -1.93
AP3S1-202ENST00000395548 C12orf73Q69YU5 71 aa2.99□□□□□ -1.93
AP3S1-202ENST00000395548 LYZL1Q6UWQ5 148 aa2.99□□□□□ -1.93
AP3S1-202ENST00000395548 RNF182Q8N6D2 247 aa2.99□□□□□ -1.93
AP3S1-202ENST00000395548 DEDD2Q8WXF8 326 aa2.99□□□□□ -1.93
AP3S1-202ENST00000395548 TMEM191AQ9H0A3 160 aa2.99□□□□□ -1.93
AP3S1-202ENST00000395548 SAR1AQ9NR31 198 aa2.99□□□□□ -1.93
AP3S1-202ENST00000395548 ANAPC11Q9NYG5 84 aa2.99□□□□□ -1.93
AP3S1-202ENST00000395548 TRAV7A0A075B6U4 112 aa2.98□□□□□ -1.93
AP3S1-202ENST00000395548 A0A1B0GU33 70 aa2.98□□□□□ -1.93
AP3S1-202ENST00000395548 C11orf86A6NJI1 115 aa2.98□□□□□ -1.93
AP3S1-202ENST00000395548 UQCRQO14949 82 aa2.98□□□□□ -1.93
AP3S1-202ENST00000395548 ZNF22P17026 224 aaPredicted RBP2.98□□□□□ -1.93
AP3S1-202ENST00000395548 AKR1D1P51857 326 aa2.98□□□□□ -1.93
AP3S1-202ENST00000395548 FOXA3P55318 350 aaPredicted RBP2.98□□□□□ -1.93
AP3S1-202ENST00000395548 LSM3P62310 102 aaKnown RBP2.98□□□□□ -1.93
AP3S1-202ENST00000395548 KRTAP19-6Q3LI70 58 aa2.98□□□□□ -1.93
AP3S1-202ENST00000395548 C1orf137Q5JT78 98 aa2.98□□□□□ -1.93
AP3S1-202ENST00000395548 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.98□□□□□ -1.93
AP3S1-202ENST00000395548 PSMG3Q9BT73 122 aaPredicted RBP2.98□□□□□ -1.93
AP3S1-202ENST00000395548 IGLV10-54A0A075B6I4 117 aa2.97□□□□□ -1.93
AP3S1-202ENST00000395548 FAM236AA0A1B0GUQ0 79 aa2.97□□□□□ -1.93
AP3S1-202ENST00000395548 FAM236BA0A1B0GV22 79 aa2.97□□□□□ -1.93
AP3S1-202ENST00000395548 ZNF727A8MUV8 499 aa2.97□□□□□ -1.93
AP3S1-202ENST00000395548 H7C2G1 150 aa2.97□□□□□ -1.93
AP3S1-202ENST00000395548 GNRH2O43555 120 aa2.97□□□□□ -1.93
AP3S1-202ENST00000395548 TIMM17BO60830 172 aa2.97□□□□□ -1.93
AP3S1-202ENST00000395548 SLC25A5P05141 298 aaKnown RBP2.97□□□□□ -1.93
AP3S1-202ENST00000395548 RNASE2P10153 161 aaKnown RBP2.97□□□□□ -1.93
AP3S1-202ENST00000395548 FGF7P21781 194 aa2.97□□□□□ -1.93
AP3S1-202ENST00000395548 FXYD2P54710 66 aa2.97□□□□□ -1.93
AP3S1-202ENST00000395548 RHOHQ15669 191 aa2.97□□□□□ -1.93
AP3S1-202ENST00000395548 Q8NDZ9 215 aa2.97□□□□□ -1.93
AP3S1-202ENST00000395548 ZNF431Q8TF32 576 aaPredicted RBP2.97□□□□□ -1.93
AP3S1-202ENST00000395548 ODF3Q96PU9 254 aa2.97□□□□□ -1.93
AP3S1-202ENST00000395548 DUSP21Q9H596 190 aa2.97□□□□□ -1.93
AP3S1-202ENST00000395548 NHP2Q9NX24 153 aaKnown RBP2.97□□□□□ -1.93
AP3S1-202ENST00000395548 TRBV10-2A0A0K0K1G8 114 aa2.96□□□□□ -1.94
AP3S1-202ENST00000395548 SNRPGP15A8MWD9 76 aa2.96□□□□□ -1.94
AP3S1-202ENST00000395548 PATE2Q6UY27 113 aa2.96□□□□□ -1.94
AP3S1-202ENST00000395548 COX6B2Q6YFQ2 88 aa2.96□□□□□ -1.94
AP3S1-202ENST00000395548 LINC00167Q96N53 147 aa2.96□□□□□ -1.94
AP3S1-202ENST00000395548 NAA38Q9BRA0 125 aaKnown RBP2.96□□□□□ -1.94
AP3S1-202ENST00000395548 NIT2Q9NQR4 276 aa2.96□□□□□ -1.94
AP3S1-202ENST00000395548 TRBV6-4A0A1B0GX49 114 aa2.95□□□□□ -1.94
AP3S1-202ENST00000395548 HBDP02042 147 aa2.95□□□□□ -1.94
AP3S1-202ENST00000395548 TRGC1P0CF51 173 aa2.95□□□□□ -1.94
AP3S1-202ENST00000395548 AKAIN1P0CW23 69 aa2.95□□□□□ -1.94
AP3S1-202ENST00000395548 MRPS36P82909 103 aaKnown RBP2.95□□□□□ -1.94
AP3S1-202ENST00000395548 SPINT4Q6UDR6 99 aa2.95□□□□□ -1.94
AP3S1-202ENST00000395548 LCN15Q6UWW0 184 aa2.95□□□□□ -1.94
AP3S1-202ENST00000395548 CST9LQ9H4G1 147 aa2.95□□□□□ -1.94
AP3S1-202ENST00000395548 SCN3BQ9NY72 215 aa2.95□□□□□ -1.94
AP3S1-202ENST00000395548 COMMD3Q9UBI1 195 aa2.95□□□□□ -1.94
AP3S1-202ENST00000395548 FLGP20930 4061 aaPredicted RBP2.95□□□□□ -1.94
AP3S1-202ENST00000395548 PNMA8CA0A1B0GUJ8 204 aa2.94□□□□□ -1.94
AP3S1-202ENST00000395548 CFDP00746 253 aaPredicted RBP2.94□□□□□ -1.94
AP3S1-202ENST00000395548 TPT1P13693 172 aaKnown RBP2.94□□□□□ -1.94
AP3S1-202ENST00000395548 GNG4P50150 75 aa2.94□□□□□ -1.94
AP3S1-202ENST00000395548 ZNF90Q03938 601 aa2.94□□□□□ -1.94
AP3S1-202ENST00000395548 KRTAP25-1Q3LHN0 102 aa2.94□□□□□ -1.94
AP3S1-202ENST00000395548 ENHOQ6UWT2 76 aa2.94□□□□□ -1.94
AP3S1-202ENST00000395548 IZUMO2Q6UXV1 221 aa2.94□□□□□ -1.94
AP3S1-202ENST00000395548 TMEM91Q6ZNR0 172 aa2.94□□□□□ -1.94
AP3S1-202ENST00000395548 FP248Q71RG6 208 aaPredicted RBP2.94□□□□□ -1.94
AP3S1-202ENST00000395548 KRTAP2-1Q9BYU5 128 aa2.94□□□□□ -1.94
AP3S1-202ENST00000395548 MDN1Q9NU22 5596 aa2.94□□□□□ -1.94
AP3S1-202ENST00000395548 SYNGR2O43760 224 aa2.93□□□□□ -1.94
AP3S1-202ENST00000395548 FABP4P15090 132 aa2.93□□□□□ -1.94
AP3S1-202ENST00000395548 GNG2P59768 71 aa2.93□□□□□ -1.94
AP3S1-202ENST00000395548 MEIG1Q5JSS6 88 aa2.93□□□□□ -1.94
AP3S1-202ENST00000395548 KRTAP5-5Q701N2 237 aaPredicted RBP2.93□□□□□ -1.94
AP3S1-202ENST00000395548 TEN1Q86WV5 123 aa2.93□□□□□ -1.94
AP3S1-202ENST00000395548 CHCHD1Q96BP2 118 aaKnown RBP2.93□□□□□ -1.94
AP3S1-202ENST00000395548 HIGD2AQ9BW72 106 aa2.93□□□□□ -1.94
AP3S1-202ENST00000395548 A0A096LNI7 61 aa2.92□□□□□ -1.94
AP3S1-202ENST00000395548 LOC100130705A0A1B0GUX0 176 aa2.92□□□□□ -1.94
AP3S1-202ENST00000395548 LYRM1O43325 122 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms