RNA–Protein interactions for RNA: ENST00000394767.2

CXXC4-201, Transcript of CXXC finger protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CXXC4, Length 5,565 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4-201ENST00000394767 ASPMQ8IZT6 3477 aa13.2□□□□□ -0.3
CXXC4-201ENST00000394767 TMEM256-PLSCR3K7ERE1 68 aa13.2□□□□□ -0.3
CXXC4-201ENST00000394767 PPDPFQ9H3Y8 114 aa13.18□□□□□ -0.3
CXXC4-201ENST00000394767 HRNRQ86YZ3 2850 aaPredicted RBP13.18□□□□□ -0.3
CXXC4-201ENST00000394767 TRACP01848 142 aa13.18□□□□□ -0.3
CXXC4-201ENST00000394767 ADAMTSL4-AS1Q5T5F5 129 aa13.18□□□□□ -0.3
CXXC4-201ENST00000394767 KMT2BQ9UMN6 2715 aaPredicted RBP13.17□□□□□ -0.3
CXXC4-201ENST00000394767 ZNF73O43830 326 aaPredicted RBP13.17□□□□□ -0.3
CXXC4-201ENST00000394767 SLPIP03973 132 aa13.17□□□□□ -0.3
CXXC4-201ENST00000394767 TRIAP1O43715 76 aa13.17□□□□□ -0.3
CXXC4-201ENST00000394767 SMIM11BQ8TCY0 68 aa13.16□□□□□ -0.3
CXXC4-201ENST00000394767 RBM3P98179 157 aaKnown RBP13.16□□□□□ -0.3
CXXC4-201ENST00000394767 TCL1BO95988 128 aa13.15□□□□□ -0.3
CXXC4-201ENST00000394767 TRBV10-3A0A0K0K1G6 114 aa13.15□□□□□ -0.3
CXXC4-201ENST00000394767 IGLV5-39A0A0G2JS06 123 aa13.15□□□□□ -0.3
CXXC4-201ENST00000394767 TRBV10-2A0A0K0K1G8 114 aa13.14□□□□□ -0.31
CXXC4-201ENST00000394767 JMJD7-PLA2G4BH0Y9G9 81 aa13.14□□□□□ -0.31
CXXC4-201ENST00000394767 DHRS4-AS1Q9P1J3 65 aa13.11□□□□□ -0.31
CXXC4-201ENST00000394767 Q6ZQY7 126 aa13.11□□□□□ -0.31
CXXC4-201ENST00000394767 WFDC2Q14508 124 aa13.11□□□□□ -0.31
CXXC4-201ENST00000394767 H3BT86 120 aa13.1□□□□□ -0.31
CXXC4-201ENST00000394767 MRPL55Q7Z7F7 128 aaKnown RBP13.1□□□□□ -0.31
CXXC4-201ENST00000394767 SIGMAR1Q99720 223 aa13.1□□□□□ -0.31
CXXC4-201ENST00000394767 IGLV5-45A0A087WSX0 123 aa13.09□□□□□ -0.31
CXXC4-201ENST00000394767 C6orf48Q9UBA6 75 aa13.09□□□□□ -0.31
CXXC4-201ENST00000394767 C10orf25Q5T742 122 aa13.09□□□□□ -0.31
CXXC4-201ENST00000394767 NBEAL2Q6ZNJ1 2754 aa13.08□□□□□ -0.32
CXXC4-201ENST00000394767 RPL28P46779 137 aaKnown RBP13.08□□□□□ -0.32
CXXC4-201ENST00000394767 REG3GQ6UW15 175 aa13.08□□□□□ -0.32
CXXC4-201ENST00000394767 ZNF706Q9Y5V0 76 aaPredicted RBP13.08□□□□□ -0.32
CXXC4-201ENST00000394767 C1orf137Q5JT78 98 aa13.07□□□□□ -0.32
CXXC4-201ENST00000394767 APLNQ9ULZ1 77 aa13.07□□□□□ -0.32
CXXC4-201ENST00000394767 WDFY3Q8IZQ1 3526 aa13.06□□□□□ -0.32
CXXC4-201ENST00000394767 NREPQ16612 68 aa13.06□□□□□ -0.32
CXXC4-201ENST00000394767 RTL8CO15255 209 aa13.06□□□□□ -0.32
CXXC4-201ENST00000394767 TEN1Q86WV5 123 aa13.06□□□□□ -0.32
CXXC4-201ENST00000394767 NIPBLQ6KC79 2804 aaeCLIP13.04□□□□□ -0.32
CXXC4-201ENST00000394767 C14orf132Q9NPU4 83 aa13.04□□□□□ -0.32
CXXC4-201ENST00000394767 C22orf24Q9Y442 160 aa13.04□□□□□ -0.32
CXXC4-201ENST00000394767 C16orf90A8MZG2 172 aa13.03□□□□□ -0.32
CXXC4-201ENST00000394767 DCHS2Q6V1P9 2916 aa13.03□□□□□ -0.32
CXXC4-201ENST00000394767 NDUFC2O95298 119 aa13.03□□□□□ -0.32
CXXC4-201ENST00000394767 NDUFB1O75438 58 aa13.01□□□□□ -0.33
CXXC4-201ENST00000394767 IGLV9-49A0A0B4J1Y8 123 aa13□□□□□ -0.33
CXXC4-201ENST00000394767 PDE6GP18545 87 aa13□□□□□ -0.33
CXXC4-201ENST00000394767 TENM4Q6N022 2769 aa13□□□□□ -0.33
CXXC4-201ENST00000394767 GVQW2A0A096LPI5 108 aaPredicted RBP13□□□□□ -0.33
CXXC4-201ENST00000394767 PRR34Q9NV39 138 aa12.99□□□□□ -0.33
CXXC4-201ENST00000394767 ZNF575Q86XF7 245 aa12.99□□□□□ -0.33
CXXC4-201ENST00000394767 NDUFS5O43920 106 aa12.98□□□□□ -0.33
CXXC4-201ENST00000394767 UPK3BQ9BT76 320 aa12.96□□□□□ -0.34
CXXC4-201ENST00000394767 LST1O00453 97 aa12.95□□□□□ -0.34
CXXC4-201ENST00000394767 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.95□□□□□ -0.34
CXXC4-201ENST00000394767 ACYP1P07311 99 aa12.95□□□□□ -0.34
CXXC4-201ENST00000394767 PRYO14603 147 aa12.94□□□□□ -0.34
CXXC4-201ENST00000394767 PRLHP81277 87 aa12.94□□□□□ -0.34
CXXC4-201ENST00000394767 HRCT1Q6UXD1 115 aa12.94□□□□□ -0.34
CXXC4-201ENST00000394767 CHTF8P0CG12 524 aa12.94□□□□□ -0.34
CXXC4-201ENST00000394767 LINC00337Q8N6G1 96 aa12.93□□□□□ -0.34
CXXC4-201ENST00000394767 ASH1LQ9NR48 2969 aaKnown RBP12.93□□□□□ -0.34
CXXC4-201ENST00000394767 LINC00167Q96N53 147 aa12.92□□□□□ -0.34
CXXC4-201ENST00000394767 H0Y9J4 135 aa12.92□□□□□ -0.34
CXXC4-201ENST00000394767 CCKP06307 115 aa12.91□□□□□ -0.34
CXXC4-201ENST00000394767 TEX49A0A1B0GTD5 131 aa12.9□□□□□ -0.34
CXXC4-201ENST00000394767 A0A1B0GX51 115 aa12.9□□□□□ -0.34
CXXC4-201ENST00000394767 NF1P21359 2839 aa12.9□□□□□ -0.34
CXXC4-201ENST00000394767 CASC10Q5T4H9 136 aa12.89□□□□□ -0.35
CXXC4-201ENST00000394767 IGKV3D-7A0A0C4DH55 119 aa12.89□□□□□ -0.35
CXXC4-201ENST00000394767 PHF5AQ7RTV0 110 aaKnown RBP12.88□□□□□ -0.35
CXXC4-201ENST00000394767 A0A087WTM6 91 aa12.88□□□□□ -0.35
CXXC4-201ENST00000394767 Q8N814 137 aa12.88□□□□□ -0.35
CXXC4-201ENST00000394767 LINC00476Q8WZB0 136 aa12.87□□□□□ -0.35
CXXC4-201ENST00000394767 ANAPC13Q9BS18 74 aa12.87□□□□□ -0.35
CXXC4-201ENST00000394767 Q6ZRP5 223 aa12.87□□□□□ -0.35
CXXC4-201ENST00000394767 NDUFV3P56181 108 aaKnown RBP12.86□□□□□ -0.35
CXXC4-201ENST00000394767 FBN2P35556 2912 aa12.86□□□□□ -0.35
CXXC4-201ENST00000394767 SPINK6Q6UWN8 80 aa12.86□□□□□ -0.35
CXXC4-201ENST00000394767 C15orf56Q8N910 161 aa12.85□□□□□ -0.35
CXXC4-201ENST00000394767 SOSTDC1Q6X4U4 206 aa12.85□□□□□ -0.35
CXXC4-201ENST00000394767 A0A087WYN8 130 aa12.85□□□□□ -0.35
CXXC4-201ENST00000394767 FAM19A3Q7Z5A8 133 aa12.83□□□□□ -0.36
CXXC4-201ENST00000394767 CIRBP-AS1Q8TBR5 109 aa12.83□□□□□ -0.36
CXXC4-201ENST00000394767 PCP4P48539 62 aa12.83□□□□□ -0.36
CXXC4-201ENST00000394767 BPY2O14599 106 aa12.82□□□□□ -0.36
CXXC4-201ENST00000394767 FAM229AH3BQW9 127 aa12.81□□□□□ -0.36
CXXC4-201ENST00000394767 SMCR5Q8TEV8 140 aa12.81□□□□□ -0.36
CXXC4-201ENST00000394767 Q9BRP9 147 aa12.79□□□□□ -0.36
CXXC4-201ENST00000394767 KIAA0087Q14695 138 aa12.79□□□□□ -0.36
CXXC4-201ENST00000394767 SS18L2Q9UHA2 77 aa12.79□□□□□ -0.36
CXXC4-201ENST00000394767 LINC00575Q6W349 94 aa12.78□□□□□ -0.36
CXXC4-201ENST00000394767 ZFHX4Q86UP3 3567 aa12.77□□□□□ -0.36
CXXC4-201ENST00000394767 FAM168BA1KXE4 195 aa12.77□□□□□ -0.36
CXXC4-201ENST00000394767 SMG1Q96Q15 3661 aaKnown RBP12.77□□□□□ -0.37
CXXC4-201ENST00000394767 LINC00336Q6ZUF6 198 aa12.76□□□□□ -0.37
CXXC4-201ENST00000394767 SCXQ7RTU7 201 aa12.75□□□□□ -0.37
CXXC4-201ENST00000394767 C9orf163Q8N9P6 203 aa12.75□□□□□ -0.37
CXXC4-201ENST00000394767 KRTAP21-3Q3LHN1 58 aa12.74□□□□□ -0.37
CXXC4-201ENST00000394767 XGP55808 180 aa12.72□□□□□ -0.37
CXXC4-201ENST00000394767 VPREB1P12018 145 aa12.71□□□□□ -0.37
CXXC4-201ENST00000394767 SERTAD4-AS1Q5TG53 156 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms