RNA–Protein interactions for RNA: ENST00000393952.3

LRFN4-202, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

TSL 5 BASIC

Gene LRFN4, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-202ENST00000393952 COPS9Q8WXC6 57 aa15.57■□□□□ 0.08
LRFN4-202ENST00000393952 LOC107984156A0A0G2JMH3 177 aa15.56■□□□□ 0.08
LRFN4-202ENST00000393952 C9orf129Q5T035 196 aaKnown RBP15.56■□□□□ 0.08
LRFN4-202ENST00000393952 BVES-AS1Q5T3Y7 98 aa15.56■□□□□ 0.08
LRFN4-202ENST00000393952 ARL17AQ8IVW1 177 aa15.56■□□□□ 0.08
LRFN4-202ENST00000393952 PGPEP1Q9NXJ5 209 aa15.55■□□□□ 0.08
LRFN4-202ENST00000393952 IGKV2-24A0A0C4DH68 120 aa15.54■□□□□ 0.08
LRFN4-202ENST00000393952 RPL24P83731 157 aaKnown RBP15.54■□□□□ 0.08
LRFN4-202ENST00000393952 A4D1N5 150 aa15.53■□□□□ 0.08
LRFN4-202ENST00000393952 C16orf90A8MZG2 172 aa15.53■□□□□ 0.08
LRFN4-202ENST00000393952 M0R143 59 aa15.53■□□□□ 0.08
LRFN4-202ENST00000393952 PPDPFQ9H3Y8 114 aa15.53■□□□□ 0.08
LRFN4-202ENST00000393952 PKIGQ9Y2B9 76 aa15.53■□□□□ 0.08
LRFN4-202ENST00000393952 DNAH5Q8TE73 4624 aa15.53■□□□□ 0.08
LRFN4-202ENST00000393952 Q8NDZ9 215 aa15.53■□□□□ 0.08
LRFN4-202ENST00000393952 CHTF8P0CG12 524 aa15.52■□□□□ 0.07
LRFN4-202ENST00000393952 A0A1B0GVY2 172 aa15.5■□□□□ 0.07
LRFN4-202ENST00000393952 BATFQ16520 125 aa15.5■□□□□ 0.07
LRFN4-202ENST00000393952 TMEM238LA0A1B0GVL6 79 aa15.47■□□□□ 0.07
LRFN4-202ENST00000393952 FAM168BA1KXE4 195 aa15.47■□□□□ 0.07
LRFN4-202ENST00000393952 A6NJY4 79 aa15.47■□□□□ 0.07
LRFN4-202ENST00000393952 PANO1I0J062 215 aa15.47■□□□□ 0.07
LRFN4-202ENST00000393952 PRR3P79522 188 aaKnown RBP15.47■□□□□ 0.07
LRFN4-202ENST00000393952 SNHG12Q9BXW3 62 aa15.47■□□□□ 0.07
LRFN4-202ENST00000393952 NDUFC2O95298 119 aa15.45■□□□□ 0.06
LRFN4-202ENST00000393952 VPREB1P12018 145 aa15.45■□□□□ 0.06
LRFN4-202ENST00000393952 SERTAD4-AS1Q5TG53 156 aa15.45■□□□□ 0.06
LRFN4-202ENST00000393952 NHP2Q9NX24 153 aaKnown RBP15.45■□□□□ 0.06
LRFN4-202ENST00000393952 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP15.45■□□□□ 0.06
LRFN4-202ENST00000393952 CFC1BP0CG36 223 aa15.44■□□□□ 0.06
LRFN4-202ENST00000393952 CFC1P0CG37 223 aa15.44■□□□□ 0.06
LRFN4-202ENST00000393952 PLA2G2DQ9UNK4 145 aa15.44■□□□□ 0.06
LRFN4-202ENST00000393952 IGKV2-28A0A075B6P5 120 aa15.43■□□□□ 0.06
LRFN4-202ENST00000393952 NCR3O14931 201 aa15.43■□□□□ 0.06
LRFN4-202ENST00000393952 IGKV2D-28P01615 120 aa15.43■□□□□ 0.06
LRFN4-202ENST00000393952 KRTAP7-1Q8IUC3 87 aa15.43■□□□□ 0.06
LRFN4-202ENST00000393952 LINC00474Q9P2X8 69 aa15.43■□□□□ 0.06
LRFN4-202ENST00000393952 K7ERJ3 54 aa15.42■□□□□ 0.06
LRFN4-202ENST00000393952 FAM19A5Q7Z5A7 132 aaPredicted RBP15.42■□□□□ 0.06
LRFN4-202ENST00000393952 SPACA4Q8TDM5 124 aa15.42■□□□□ 0.06
LRFN4-202ENST00000393952 KRTAP10-1P60331 282 aa15.41■□□□□ 0.06
LRFN4-202ENST00000393952 A0A1W2PNN7 141 aa15.41■□□□□ 0.06
LRFN4-202ENST00000393952 A6NDN8 102 aa15.4■□□□□ 0.06
LRFN4-202ENST00000393952 A0A0B4J2C4 111 aa15.39■□□□□ 0.05
LRFN4-202ENST00000393952 A0A1B0GWB2 263 aa15.39■□□□□ 0.05
LRFN4-202ENST00000393952 LINC00337Q8N6G1 96 aa15.39■□□□□ 0.05
LRFN4-202ENST00000393952 RAB37Q96AX2 223 aa15.38■□□□□ 0.05
LRFN4-202ENST00000393952 DPH3Q96FX2 82 aa15.38■□□□□ 0.05
LRFN4-202ENST00000393952 DNAH8Q96JB1 4490 aa15.38■□□□□ 0.05
LRFN4-202ENST00000393952 IGLV5-37A0A075B6J1 123 aa15.37■□□□□ 0.05
LRFN4-202ENST00000393952 NKAPP1Q8N9T2 125 aa15.37■□□□□ 0.05
LRFN4-202ENST00000393952 PKHD1P08F94 4074 aa15.36■□□□□ 0.05
LRFN4-202ENST00000393952 TRBV10-2A0A0K0K1G8 114 aa15.36■□□□□ 0.05
LRFN4-202ENST00000393952 FAM30AQ9NZY2 134 aa15.35■□□□□ 0.05
LRFN4-202ENST00000393952 C22orf24Q9Y442 160 aa15.35■□□□□ 0.05
LRFN4-202ENST00000393952 M0R378 163 aa15.34■□□□□ 0.05
LRFN4-202ENST00000393952 A0A087WYN8 130 aa15.33■□□□□ 0.05
LRFN4-202ENST00000393952 TRAV13-2A0A0B4J235 113 aa15.33■□□□□ 0.05
LRFN4-202ENST00000393952 OR13C6PQ8NH95 151 aa15.33■□□□□ 0.05
LRFN4-202ENST00000393952 PRO1854Q9UHT4 67 aa15.33■□□□□ 0.05
LRFN4-202ENST00000393952 RPL13AP40429 203 aaKnown RBP15.32■□□□□ 0.04
LRFN4-202ENST00000393952 C7orf33Q8WU49 177 aa15.32■□□□□ 0.04
LRFN4-202ENST00000393952 GAGE10A6NGK3 116 aa15.32■□□□□ 0.04
LRFN4-202ENST00000393952 M0QXV9 152 aa15.32■□□□□ 0.04
LRFN4-202ENST00000393952 Q6ZSA8 131 aa15.31■□□□□ 0.04
LRFN4-202ENST00000393952 DYNC1H1Q14204 4646 aaKnown RBP15.3■□□□□ 0.04
LRFN4-202ENST00000393952 S100A7L2Q5SY68 101 aa15.3■□□□□ 0.04
LRFN4-202ENST00000393952 H7C2G1 150 aa15.29■□□□□ 0.04
LRFN4-202ENST00000393952 MRPL55Q7Z7F7 128 aaKnown RBP15.29■□□□□ 0.04
LRFN4-202ENST00000393952 TRBV10-3A0A0K0K1G6 114 aa15.28■□□□□ 0.04
LRFN4-202ENST00000393952 COL5A1-AS1Q5SY13 56 aa15.28■□□□□ 0.04
LRFN4-202ENST00000393952 LINC00167Q96N53 147 aa15.28■□□□□ 0.04
LRFN4-202ENST00000393952 PLAC8Q9NZF1 115 aa15.28■□□□□ 0.04
LRFN4-202ENST00000393952 EPM2AB3EWF7 344 aa15.28■□□□□ 0.04
LRFN4-202ENST00000393952 IGLV6-57P01721 117 aa15.28■□□□□ 0.04
LRFN4-202ENST00000393952 PHF5AQ7RTV0 110 aaKnown RBP15.28■□□□□ 0.04
LRFN4-202ENST00000393952 LRP1BQ9NZR2 4599 aa15.27■□□□□ 0.04
LRFN4-202ENST00000393952 TMEM126AQ9H061 195 aa15.27■□□□□ 0.03
LRFN4-202ENST00000393952 RPL37AP8A6NKH3 93 aa15.24■□□□□ 0.03
LRFN4-202ENST00000393952 TAX1BP3O14907 124 aa15.24■□□□□ 0.03
LRFN4-202ENST00000393952 TSPAN13O95857 204 aa15.24■□□□□ 0.03
LRFN4-202ENST00000393952 Q1RN00 199 aa15.24■□□□□ 0.03
LRFN4-202ENST00000393952 LBHQ53QV2 105 aaPredicted RBP15.24■□□□□ 0.03
LRFN4-202ENST00000393952 HAMPP81172 84 aa15.23■□□□□ 0.03
LRFN4-202ENST00000393952 CIRBP-AS1Q8TBR5 109 aa15.23■□□□□ 0.03
LRFN4-202ENST00000393952 SCXQ7RTU7 201 aa15.22■□□□□ 0.03
LRFN4-202ENST00000393952 IGLV1-50A0A075B6I6 118 aa15.21■□□□□ 0.03
LRFN4-202ENST00000393952 SMIM11BQ8TCY0 68 aa15.21■□□□□ 0.03
LRFN4-202ENST00000393952 NAA38Q9BRA0 125 aaKnown RBP15.21■□□□□ 0.03
LRFN4-202ENST00000393952 TRAV23DV6A0A075B6W5 121 aa15.18■□□□□ 0.02
LRFN4-202ENST00000393952 UBE2BP63146 152 aa15.18■□□□□ 0.02
LRFN4-202ENST00000393952 KRTAP11-1Q8IUC1 163 aa15.18■□□□□ 0.02
LRFN4-202ENST00000393952 KCNQ1DNQ9H478 68 aa15.16■□□□□ 0.02
LRFN4-202ENST00000393952 C9orf118A6NHY6 69 aa15.15■□□□□ 0.02
LRFN4-202ENST00000393952 RPL28P46779 137 aaKnown RBP15.15■□□□□ 0.02
LRFN4-202ENST00000393952 H3BUT2 72 aa15.14■□□□□ 0.01
LRFN4-202ENST00000393952 TRIAP1O43715 76 aa15.14■□□□□ 0.01
LRFN4-202ENST00000393952 PSMB2P49721 201 aa15.14■□□□□ 0.01
LRFN4-202ENST00000393952 PRYO14603 147 aa15.13■□□□□ 0.01
LRFN4-202ENST00000393952 ZNF73O43830 326 aaPredicted RBP15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms