RNA–Protein interactions for RNA: ENST00000393693.6

SNCB-202, Transcript of synuclein beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCB, Length 1,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-202ENST00000393693 BVES-AS1Q5T3Y7 98 aa11.94□□□□□ -0.5
SNCB-202ENST00000393693 CEND1Q8N111 149 aa11.94□□□□□ -0.5
SNCB-202ENST00000393693 SNHG12Q9BXW3 62 aa11.94□□□□□ -0.5
SNCB-202ENST00000393693 PANO1I0J062 215 aa11.93□□□□□ -0.5
SNCB-202ENST00000393693 LBHQ53QV2 105 aaPredicted RBP11.93□□□□□ -0.5
SNCB-202ENST00000393693 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.93□□□□□ -0.5
SNCB-202ENST00000393693 ZNF561-AS1K7EIQ3 104 aa11.92□□□□□ -0.5
SNCB-202ENST00000393693 PTTG1IPP53801 180 aa11.92□□□□□ -0.5
SNCB-202ENST00000393693 KIAA0087Q14695 138 aa11.92□□□□□ -0.5
SNCB-202ENST00000393693 COPS9Q8WXC6 57 aa11.92□□□□□ -0.5
SNCB-202ENST00000393693 SPANXDQ9BXN6 97 aa11.92□□□□□ -0.5
SNCB-202ENST00000393693 SPANXCQ9NY87 97 aa11.92□□□□□ -0.5
SNCB-202ENST00000393693 TMEM238LA0A1B0GVL6 79 aa11.91□□□□□ -0.5
SNCB-202ENST00000393693 A6NDN8 102 aa11.91□□□□□ -0.5
SNCB-202ENST00000393693 A6NJY4 79 aa11.91□□□□□ -0.5
SNCB-202ENST00000393693 F8WDY8 70 aa11.91□□□□□ -0.5
SNCB-202ENST00000393693 C9orf163Q8N9P6 203 aa11.9□□□□□ -0.5
SNCB-202ENST00000393693 IFITM1P13164 125 aa11.89□□□□□ -0.51
SNCB-202ENST00000393693 MT1HL1P0DM35 61 aa11.88□□□□□ -0.51
SNCB-202ENST00000393693 COL5A1-AS1Q5SY13 56 aa11.88□□□□□ -0.51
SNCB-202ENST00000393693 C2orf48Q96LS8 159 aa11.88□□□□□ -0.51
SNCB-202ENST00000393693 LITAFQ99732 161 aa11.88□□□□□ -0.51
SNCB-202ENST00000393693 SMIM13P0DJ93 91 aa11.87□□□□□ -0.51
SNCB-202ENST00000393693 LINC00158P58513 81 aa11.87□□□□□ -0.51
SNCB-202ENST00000393693 RPL24P83731 157 aaKnown RBP11.87□□□□□ -0.51
SNCB-202ENST00000393693 C2orf82Q6UX34 121 aa11.87□□□□□ -0.51
SNCB-202ENST00000393693 SDIM1Q6ZPB5 146 aa11.87□□□□□ -0.51
SNCB-202ENST00000393693 ERG28Q9UKR5 140 aa11.87□□□□□ -0.51
SNCB-202ENST00000393693 GVQW2A0A096LPI5 108 aaPredicted RBP11.86□□□□□ -0.51
SNCB-202ENST00000393693 COX17Q14061 63 aa11.86□□□□□ -0.51
SNCB-202ENST00000393693 C15orf56Q8N910 161 aa11.86□□□□□ -0.51
SNCB-202ENST00000393693 HIGD2BQ4VC39 106 aa11.85□□□□□ -0.51
SNCB-202ENST00000393693 ADAMTSL4-AS1Q5T5F5 129 aa11.85□□□□□ -0.51
SNCB-202ENST00000393693 MUSTN1Q8IVN3 82 aa11.85□□□□□ -0.51
SNCB-202ENST00000393693 CAMK2N2Q96S95 79 aa11.85□□□□□ -0.51
SNCB-202ENST00000393693 A0A0U1RRA0 63 aa11.84□□□□□ -0.51
SNCB-202ENST00000393693 FXYD2P54710 66 aa11.84□□□□□ -0.51
SNCB-202ENST00000393693 TRBV30A0A0K0K1B3 111 aa11.83□□□□□ -0.52
SNCB-202ENST00000393693 PFN2P35080 140 aa11.83□□□□□ -0.52
SNCB-202ENST00000393693 PPDPFQ9H3Y8 114 aa11.83□□□□□ -0.52
SNCB-202ENST00000393693 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.82□□□□□ -0.52
SNCB-202ENST00000393693 UNQ6190/PRO20217Q6UXQ8 127 aa11.82□□□□□ -0.52
SNCB-202ENST00000393693 MIR7-3HGQ8N6C7 128 aa11.81□□□□□ -0.52
SNCB-202ENST00000393693 LINC00308Q8TCZ7 52 aa11.81□□□□□ -0.52
SNCB-202ENST00000393693 LINC00526Q96FQ7 95 aa11.81□□□□□ -0.52
SNCB-202ENST00000393693 NHP2Q9NX24 153 aaKnown RBP11.81□□□□□ -0.52
SNCB-202ENST00000393693 Q6ZRU5 148 aa11.8□□□□□ -0.52
SNCB-202ENST00000393693 DAND5Q8N907 189 aa11.8□□□□□ -0.52
SNCB-202ENST00000393693 SLPIP03973 132 aa11.79□□□□□ -0.52
SNCB-202ENST00000393693 CHTF8P0CG12 524 aa11.79□□□□□ -0.52
SNCB-202ENST00000393693 NPC2P61916 151 aa11.79□□□□□ -0.52
SNCB-202ENST00000393693 SYCNQ0VAF6 134 aa11.79□□□□□ -0.52
SNCB-202ENST00000393693 A4D1N5 150 aa11.78□□□□□ -0.52
SNCB-202ENST00000393693 CNBPP62633 177 aaKnown RBP11.78□□□□□ -0.52
SNCB-202ENST00000393693 C10orf25Q5T742 122 aa11.78□□□□□ -0.52
SNCB-202ENST00000393693 DPH3Q96FX2 82 aa11.78□□□□□ -0.52
SNCB-202ENST00000393693 RNF151Q2KHN1 245 aa11.77□□□□□ -0.53
SNCB-202ENST00000393693 C6orf48Q9UBA6 75 aa11.77□□□□□ -0.53
SNCB-202ENST00000393693 A0A087WYN8 130 aa11.76□□□□□ -0.53
SNCB-202ENST00000393693 A0A1B0GWB2 263 aa11.76□□□□□ -0.53
SNCB-202ENST00000393693 RAB37Q96AX2 223 aa11.76□□□□□ -0.53
SNCB-202ENST00000393693 CARD19Q96LW7 228 aa11.75□□□□□ -0.53
SNCB-202ENST00000393693 LRP2P98164 4655 aa11.75□□□□□ -0.53
SNCB-202ENST00000393693 TNXBP22105 4242 aa11.74□□□□□ -0.53
SNCB-202ENST00000393693 A0A0B4J2C4 111 aa11.74□□□□□ -0.53
SNCB-202ENST00000393693 C9orf116Q5BN46 136 aaPredicted RBP11.74□□□□□ -0.53
SNCB-202ENST00000393693 RNF213Q63HN8 5207 aa11.73□□□□□ -0.53
SNCB-202ENST00000393693 CFC1BP0CG36 223 aa11.73□□□□□ -0.53
SNCB-202ENST00000393693 CFC1P0CG37 223 aa11.73□□□□□ -0.53
SNCB-202ENST00000393693 SPACA4Q8TDM5 124 aa11.73□□□□□ -0.53
SNCB-202ENST00000393693 LOC107984156A0A0G2JMH3 177 aa11.72□□□□□ -0.53
SNCB-202ENST00000393693 TAX1BP3O14907 124 aa11.72□□□□□ -0.53
SNCB-202ENST00000393693 SOSTDC1Q6X4U4 206 aa11.72□□□□□ -0.53
SNCB-202ENST00000393693 ARL17AQ8IVW1 177 aa11.72□□□□□ -0.53
SNCB-202ENST00000393693 SND1-IT1Q9HBX3 110 aa11.72□□□□□ -0.53
SNCB-202ENST00000393693 PRO1854Q9UHT4 67 aa11.72□□□□□ -0.53
SNCB-202ENST00000393693 K7ERJ3 54 aa11.71□□□□□ -0.53
SNCB-202ENST00000393693 NDUFC2-KCTD14E9PQ53 114 aa11.7□□□□□ -0.54
SNCB-202ENST00000393693 C9orf118A6NHY6 69 aa11.69□□□□□ -0.54
SNCB-202ENST00000393693 PLAC8Q9NZF1 115 aa11.69□□□□□ -0.54
SNCB-202ENST00000393693 EIF4EBP3O60516 100 aaPredicted RBP11.68□□□□□ -0.54
SNCB-202ENST00000393693 TRAV13-2A0A0B4J235 113 aa11.67□□□□□ -0.54
SNCB-202ENST00000393693 NDUFC2O95298 119 aa11.67□□□□□ -0.54
SNCB-202ENST00000393693 TLX1NBP0CAT3 122 aa11.67□□□□□ -0.54
SNCB-202ENST00000393693 PKIGQ9Y2B9 76 aa11.67□□□□□ -0.54
SNCB-202ENST00000393693 C7orf33Q8WU49 177 aa11.65□□□□□ -0.54
SNCB-202ENST00000393693 IGKV2-24A0A0C4DH68 120 aa11.64□□□□□ -0.55
SNCB-202ENST00000393693 LOC107984640A0A0U1RRK4 108 aa11.64□□□□□ -0.55
SNCB-202ENST00000393693 H3BUT2 72 aa11.64□□□□□ -0.55
SNCB-202ENST00000393693 Q1RN00 199 aa11.64□□□□□ -0.55
SNCB-202ENST00000393693 A0A1B0GV90 55 aa11.63□□□□□ -0.55
SNCB-202ENST00000393693 RPL18AQ02543 176 aaKnown RBP11.63□□□□□ -0.55
SNCB-202ENST00000393693 LINC01600Q96MT4 127 aa11.63□□□□□ -0.55
SNCB-202ENST00000393693 RPL13AP40429 203 aaKnown RBP11.62□□□□□ -0.55
SNCB-202ENST00000393693 GAGE2EQ4V326 116 aa11.62□□□□□ -0.55
SNCB-202ENST00000393693 GAGE2DQ9UEU5 116 aa11.62□□□□□ -0.55
SNCB-202ENST00000393693 TSPAN13O95857 204 aa11.61□□□□□ -0.55
SNCB-202ENST00000393693 PRR3P79522 188 aaKnown RBP11.61□□□□□ -0.55
SNCB-202ENST00000393693 LYRM7Q5U5X0 104 aa11.61□□□□□ -0.55
SNCB-202ENST00000393693 Q6ZRP5 223 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms